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DESCRIPTION
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Package: RNAseqQC
Title: Quality Control for RNA-Seq Data
Version: 0.2.1
Authors@R: c(
person("Frederik", "Ziebell", email="f_ziebell@web.de", role = "cre"),
person("Frederik", "Ziebell", email="frederik.x.ziebell@gsk.com", role = "aut", comment = c(ORCID = "0000-0003-3673-1721")),
person("GlaxoSmithKline Research & Development Limited", role = "cph", comment = "GlaxoSmithKline Research & Development Limited; registered address: 980 Great West Road, Brentford, Middlesex TW8 9GS, United Kingdom")
)
Description: Functions for semi-automated quality control of bulk RNA-seq data.
License: Apache License (>= 2)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Depends:
R (>= 4.0)
Imports:
AnnotationHub,
AnnotationFilter,
BiocGenerics,
ensembldb,
circlize,
DESeq2,
SummarizedExperiment,
ComplexHeatmap,
matrixStats,
grid,
ggpointdensity,
ggrepel,
ggplot2,
cowplot,
patchwork,
purrr,
dplyr,
stringr,
tidyr,
tibble,
tidyselect,
magrittr
Suggests:
rmarkdown,
knitr,
recount3,
apeglm,
ggrastr,
gghighlight
VignetteBuilder: knitr
URL: https://github.com/frederikziebell/RNAseqQC
BugReports: https://github.com/frederikziebell/RNAseqQC/issues