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conda.yml
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conda.yml
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name: predict_drug_clinical_trial
channels:
- rdkit
- conda-forge
- anaconda
- defaults
dependencies:
- _pytorch_select=0.1=cpu_0
- beautifulsoup4=4.9.3=pyhb0f4dca_0
- blas=1.0=mkl
- brotlipy=0.7.0=py37haf1e3a3_1000
- bzip2=1.0.8=h1de35cc_0
- ca-certificates=2020.10.14=0
- cairo=1.14.12=hc4e6be7_4
- certifi=2020.6.20=py37_0
- cffi=1.14.0=py37hc512035_1
- cryptography=3.1.1=py37hddc9c9b_0
- cycler=0.10.0=py37_0
- decorator=4.4.2=py_0
- fontconfig=2.13.0=h5d5b041_1
- freetype=2.10.2=ha233b18_0
- gettext=0.19.8.1=hb0f4f8b_2
- glib=2.65.0=hc5f4afa_0
- icu=58.2=h0a44026_3
- idna=2.10=py_0
- intel-openmp=2019.4=233
- joblib=0.16.0=py_0
- jpeg=9b=he5867d9_2
- kiwisolver=1.2.0=py37h04f5b5a_0
- lcms2=2.11=h92f6f08_0
- libboost=1.67.0=hebc422b_4
- libcxx=10.0.0=1
- libedit=3.1.20191231=haf1e3a3_0
- libffi=3.3=h0a44026_1
- libgfortran=3.0.1=h93005f0_2
- libiconv=1.16=h1de35cc_0
- libpng=1.6.37=ha441bb4_0
- libtiff=4.1.0=hcb84e12_1
- libxml2=2.9.10=h3b9e6c8_1
- libxslt=1.1.34=h83b36ba_0
- llvm-openmp=10.0.0=h28b9765_0
- lxml=4.6.1=py37h63b7cb6_0
- lz4-c=1.9.2=h0a44026_0
- matplotlib=3.2.2=0
- matplotlib-base=3.2.2=py37h5670ca0_0
- mkl=2019.4=233
- mkl-service=2.3.0=py37hfbe908c_0
- mkl_fft=1.1.0=py37hc64f4ea_0
- mkl_random=1.1.1=py37h959d312_0
- ncurses=6.2=h0a44026_1
- networkx=2.5=py_0
- ninja=1.9.0=py37h04f5b5a_0
- numpy=1.18.5=py37h1da2735_0
- numpy-base=1.18.5=py37h3304bdc_0
- olefile=0.46=py37_0
- openssl=1.1.1h=haf1e3a3_0
- pandas=1.0.5=py37h959d312_0
- pcre=8.44=hb1e8313_0
- pillow=7.2.0=py37ha54b6ba_0
- pip=20.1.1=py37_1
- pixman=0.40.0=haf1e3a3_0
- py-boost=1.67.0=py37h6440ff4_4
- pycparser=2.20=py_0
- pyopenssl=19.1.0=py_1
- pyparsing=2.4.7=py_0
- pysocks=1.7.1=py37_0
- python=3.7.7=hf48f09d_4
- python-dateutil=2.8.1=py_0
- python-wget=3.2=py_0
- python_abi=3.7=1_cp37m
- pytz=2020.1=py_0
- rdkit=2020.03.3.0=py37h65625ec_1
- readline=8.0=h1de35cc_0
- scikit-learn=0.23.1=py37h603561c_0
- seaborn=0.11.0=py_0
- setuptools=47.3.1=py37_0
- six=1.15.0=py_0
- soupsieve=2.0.1=py_0
- sqlite=3.32.3=hffcf06c_0
- threadpoolctl=2.1.0=pyh5ca1d4c_0
- tk=8.6.10=hb0a8c7a_0
- tornado=6.0.4=py37h1de35cc_1
- wget=1.20.1=h051b688_0
- wheel=0.34.2=py37_0
- xlrd=1.2.0=py37_0
- xz=5.2.5=h1de35cc_0
- zlib=1.2.11=h1de35cc_3
- zstd=1.4.4=h1990bb4_3
- pip:
- absl-py==0.9.0
- astunparse==1.6.3
- biobert-embedding==0.1.2
- boto3==1.14.16
- botocore==1.17.16
- cachetools==4.1.1
- chardet==3.0.4
- cssselect==1.1.0
- docutils==0.15.2
- drugdataloader==0.1
- future==0.18.2
- gast==0.3.3
- google-auth==1.18.0
- google-auth-oauthlib==0.4.1
- google-pasta==0.2.0
- graphics-py==5.0.1.post1
- grpcio==1.30.0
- h5py==2.10.0
- html2json==0.2.4.1
- icd10-cm==0.0.4
- importlib-metadata==1.7.0
- jmespath==0.10.0
- keras-preprocessing==1.1.2
- markdown==3.2.2
- oauthlib==3.1.0
- opt-einsum==3.2.1
- protobuf==3.12.2
- pyasn1==0.4.8
- pyasn1-modules==0.2.8
- pypdf2==1.26.0
- pyquery==1.4.1
- pytorch-pretrained-bert==0.6.2
- regex==2020.6.8
- requests==2.24.0
- requests-oauthlib==1.3.0
- rsa==4.6
- s3transfer==0.3.3
- scipy==1.4.1
- tensorboard==2.2.2
- tensorboard-plugin-wit==1.7.0
- tensorflow==2.2.0
- tensorflow-estimator==2.2.0
- termcolor==1.1.0
- torch==1.2.0
- tqdm==4.47.0
- urllib3==1.25.9
- werkzeug==1.0.1
- wrapt==1.12.1
- zipp==3.1.0