From a75bca59b45777b6df4769791bab6badc2267bb6 Mon Sep 17 00:00:00 2001 From: mvdbeek Date: Wed, 11 Dec 2024 12:18:14 +0100 Subject: [PATCH] Add test --- lib/galaxy_test/api/test_tools.py | 18 ++++++++++++++++++ 1 file changed, 18 insertions(+) diff --git a/lib/galaxy_test/api/test_tools.py b/lib/galaxy_test/api/test_tools.py index 56fea13f8285..4547e7d13317 100644 --- a/lib/galaxy_test/api/test_tools.py +++ b/lib/galaxy_test/api/test_tools.py @@ -2511,6 +2511,24 @@ def test_multi_param_column_nested_list_fails_on_invalid_column(self): exception_raised = e assert exception_raised, "Expected invalid column selection to fail job" + @skip_without_tool("implicit_conversion_format_input") + def test_implicit_conversion_input_dataset_tracking(self): + with self.dataset_populator.test_history() as history_id: + compressed_path = self.test_data_resolver.get_filename("1.fastqsanger.gz") + with open(compressed_path, "rb") as fh: + dataset = self.dataset_populator.new_dataset( + history_id, content=fh, file_type="fastqsanger.gz", wait=True + ) + outputs = self._run( + "Grep1", history_id=history_id, inputs={"data": {"src": "hda", "id": dataset["id"]}}, assert_ok=True + ) + job_details = self.dataset_populator.get_job_details(outputs["jobs"][0]["id"], full=True).json() + assert job_details["inputs"]["input"]["id"] != dataset["id"] + converted_input = self.dataset_populator.get_history_dataset_details( + history_id=history_id, content_id=job_details["inputs"]["input"]["id"] + ) + assert converted_input["extension"] == "fastqsanger" + @skip_without_tool("column_multi_param") def test_implicit_conversion_and_reduce(self): with self.dataset_populator.test_history() as history_id: