From 2bbd81baf3d6f08c8c7747bd56766009868163dd Mon Sep 17 00:00:00 2001 From: balhoff Date: Wed, 10 Jul 2024 14:51:06 +0000 Subject: [PATCH] [create-pull-request] automated change --- .../cellular_anatomical_entity_organization.tsv | 2 +- src/design_patterns/negative_regulation.tsv | 1 - src/design_patterns/positive_regulation.tsv | 1 - src/design_patterns/regulation.tsv | 1 - src/ontology/imports/go-pattern-conformance.ttl | 15 +++------------ 5 files changed, 4 insertions(+), 16 deletions(-) diff --git a/src/design_patterns/cellular_anatomical_entity_organization.tsv b/src/design_patterns/cellular_anatomical_entity_organization.tsv index 97da3f6052..72c64529ab 100644 --- a/src/design_patterns/cellular_anatomical_entity_organization.tsv +++ b/src/design_patterns/cellular_anatomical_entity_organization.tsv @@ -105,7 +105,6 @@ http://purl.obolibrary.org/obo/GO_0071763 nuclear membrane organization http://p http://purl.obolibrary.org/obo/GO_0071764 nuclear outer membrane organization http://purl.obolibrary.org/obo/GO_0005640 nuclear outer membrane http://purl.obolibrary.org/obo/GO_0035063 nuclear speck organization http://purl.obolibrary.org/obo/GO_0016607 nuclear speck http://purl.obolibrary.org/obo/GO_0090143 nucleoid organization http://purl.obolibrary.org/obo/GO_0009295 nucleoid -http://purl.obolibrary.org/obo/GO_1990700 nucleolar chromatin organization http://purl.obolibrary.org/obo/GO_0030874 nucleolar chromatin http://purl.obolibrary.org/obo/GO_0007000 nucleolus organization http://purl.obolibrary.org/obo/GO_0005730 nucleolus http://purl.obolibrary.org/obo/GO_0006997 nucleus organization http://purl.obolibrary.org/obo/GO_0005634 nucleus http://purl.obolibrary.org/obo/GO_0032122 oral apparatus organization http://purl.obolibrary.org/obo/GO_0031912 oral apparatus @@ -148,6 +147,7 @@ http://purl.obolibrary.org/obo/GO_0045231 slime layer organization http://purl.o http://purl.obolibrary.org/obo/GO_0030721 spectrosome organization http://purl.obolibrary.org/obo/GO_0045170 spectrosome http://purl.obolibrary.org/obo/GO_0007051 spindle organization http://purl.obolibrary.org/obo/GO_0005819 spindle http://purl.obolibrary.org/obo/GO_0051300 spindle pole body organization http://purl.obolibrary.org/obo/GO_0005816 spindle pole body +http://purl.obolibrary.org/obo/GO_0160194 stereocilium bundle organization http://purl.obolibrary.org/obo/GO_0032421 stereocilium bundle http://purl.obolibrary.org/obo/GO_1990255 subsynaptic reticulum organization http://purl.obolibrary.org/obo/GO_0071212 subsynaptic reticulum http://purl.obolibrary.org/obo/GO_0097435 supramolecular fiber organization http://purl.obolibrary.org/obo/GO_0099512 supramolecular fiber http://purl.obolibrary.org/obo/GO_0048499 synaptic vesicle membrane organization http://purl.obolibrary.org/obo/GO_0030672 synaptic vesicle membrane diff --git a/src/design_patterns/negative_regulation.tsv b/src/design_patterns/negative_regulation.tsv index 24f0a792cc..cae82dc802 100644 --- a/src/design_patterns/negative_regulation.tsv +++ b/src/design_patterns/negative_regulation.tsv @@ -2625,7 +2625,6 @@ http://purl.obolibrary.org/obo/GO_1902948 negative regulation of tau-protein kin http://purl.obolibrary.org/obo/GO_0075258 negative regulation of teliospore formation http://purl.obolibrary.org/obo/GO_0075255 teliospore formation http://purl.obolibrary.org/obo/GO_0075278 negative regulation of telium development http://purl.obolibrary.org/obo/GO_0075275 telium development http://purl.obolibrary.org/obo/GO_1904873 negative regulation of telomerase RNA localization to Cajal body http://purl.obolibrary.org/obo/GO_0090671 telomerase RNA localization to Cajal body -http://purl.obolibrary.org/obo/GO_1905662 negative regulation of telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0003721 telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0051974 negative regulation of telomerase activity http://purl.obolibrary.org/obo/GO_0003720 telomerase activity http://purl.obolibrary.org/obo/GO_1904883 negative regulation of telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904868 telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904354 negative regulation of telomere capping http://purl.obolibrary.org/obo/GO_0016233 telomere capping diff --git a/src/design_patterns/positive_regulation.tsv b/src/design_patterns/positive_regulation.tsv index 28b976b8bd..a7399c0327 100644 --- a/src/design_patterns/positive_regulation.tsv +++ b/src/design_patterns/positive_regulation.tsv @@ -2617,7 +2617,6 @@ http://purl.obolibrary.org/obo/GO_0062090 positive regulation of taurine biosynt http://purl.obolibrary.org/obo/GO_0075257 positive regulation of teliospore formation http://purl.obolibrary.org/obo/GO_0075255 teliospore formation http://purl.obolibrary.org/obo/GO_0075277 positive regulation of telium development http://purl.obolibrary.org/obo/GO_0075275 telium development http://purl.obolibrary.org/obo/GO_1904874 positive regulation of telomerase RNA localization to Cajal body http://purl.obolibrary.org/obo/GO_0090671 telomerase RNA localization to Cajal body -http://purl.obolibrary.org/obo/GO_1905663 positive regulation of telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0003721 telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0051973 positive regulation of telomerase activity http://purl.obolibrary.org/obo/GO_0003720 telomerase activity http://purl.obolibrary.org/obo/GO_1904884 positive regulation of telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904868 telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904355 positive regulation of telomere capping http://purl.obolibrary.org/obo/GO_0016233 telomere capping diff --git a/src/design_patterns/regulation.tsv b/src/design_patterns/regulation.tsv index 8f8c02a041..f7f8baaa22 100644 --- a/src/design_patterns/regulation.tsv +++ b/src/design_patterns/regulation.tsv @@ -2976,7 +2976,6 @@ http://purl.obolibrary.org/obo/GO_0062089 regulation of taurine biosynthetic pro http://purl.obolibrary.org/obo/GO_0075256 regulation of teliospore formation http://purl.obolibrary.org/obo/GO_0075255 teliospore formation http://purl.obolibrary.org/obo/GO_0075276 regulation of telium development http://purl.obolibrary.org/obo/GO_0075275 telium development http://purl.obolibrary.org/obo/GO_1904872 regulation of telomerase RNA localization to Cajal body http://purl.obolibrary.org/obo/GO_0090671 telomerase RNA localization to Cajal body -http://purl.obolibrary.org/obo/GO_1905661 regulation of telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0003721 telomerase RNA reverse transcriptase activity http://purl.obolibrary.org/obo/GO_0051972 regulation of telomerase activity http://purl.obolibrary.org/obo/GO_0003720 telomerase activity http://purl.obolibrary.org/obo/GO_1904882 regulation of telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904868 telomerase catalytic core complex assembly http://purl.obolibrary.org/obo/GO_1904353 regulation of telomere capping http://purl.obolibrary.org/obo/GO_0016233 telomere capping diff --git a/src/ontology/imports/go-pattern-conformance.ttl b/src/ontology/imports/go-pattern-conformance.ttl index 72d08411df..a172d2409a 100644 --- a/src/ontology/imports/go-pattern-conformance.ttl +++ b/src/ontology/imports/go-pattern-conformance.ttl @@ -39352,6 +39352,9 @@ . + . + + . @@ -53934,15 +53937,6 @@ . - . - - - . - - - . - - , . @@ -54938,9 +54932,6 @@ . - . - - .