docker-compose.yml

version: '3'
services:
  mongodb:
    image: "mongo:4"
    restart: unless-stopped
    command: --nojournal --maxConns 64
    volumes:
      - db:/data/db
    ports:
      - 27017:27017

  rabbitmq:
    image: rabbitmq:3
    environment:
      - RABBITMQ_FEATURE_FLAGS=
    ports:
      - ${DOCKER_RABBITMQ_PORT-5672}:5672
      - ${DOCKER_RABBITMQ_CONSOLE_PORT-15672}:15672
    volumes:
      - rabbitmq:/var/lib/rabbitmq/mnesia

  histomicsui:
    environment:
      - GIRDER_MONGO_URI=mongodb://mongodb:27017/girder
      - GIRDER_BROKER_URI=amqp://rabbitmq:5672
      - GIRDER_WORKER_BROKER=amqp://rabbitmq:5672
      - GIRDER_CLIENT_TESTING_MONGO_URI=mongodb://mongodb:27017
      - HEADLESS=true
    command: girder serve -H 0.0.0.0
    ports:
      - 8080:8080
    volumes:
      - assetstore:/assetstore
      - ./girder_worker/girder_worker:/opt/girder_worker/girder_worker
      - ./slicer_cli_web/slicer_cli_web:/opt/slicer_cli_web/slicer_cli_web
      - ./large_image/sources/gdal/large_image_source_gdal:/opt/large_image/sources/gdal/large_image_source_gdal
      - ./large_image/sources/ometiff/large_image_source_ometiff:/opt/large_image/sources/ometiff/large_image_source_ometiff
      - ./large_image/sources/tiff/large_image_source_tiff:/opt/large_image/sources/tiff/large_image_source_tiff
      - ./large_image/sources/vips/large_image_source_vips:/opt/large_image/sources/vips/large_image_source_vips
      - ./large_image/sources/openslide/large_image_source_openslide:/opt/large_image/sources/openslide/large_image_source_openslide
      - ./large_image/sources/zarr/large_image_source_zarr:/opt/large_image/sources/zarr/large_image_source_zarr
      - ./large_image/sources/pil/large_image_source_pil:/opt/large_image/sources/pil/large_image_source_pil
      - ./large_image/sources/mapnik/large_image_source_mapnik:/opt/large_image/sources/mapnik/large_image_source_mapnik
      - ./large_image/sources/multi/large_image_source_multi:/opt/large_image/sources/multi/large_image_source_multi
      - ./large_image/sources/tifffile/large_image_source_tifffile:/opt/large_image/sources/tifffile/large_image_source_tifffile
      - ./large_image/sources/rasterio/large_image_source_rasterio:/opt/large_image/sources/rasterio/large_image_source_rasterio
      - ./large_image/sources/nd2/large_image_source_nd2:/opt/large_image/sources/nd2/large_image_source_nd2
      - ./large_image/sources/openjpeg/large_image_source_openjpeg:/opt/large_image/sources/openjpeg/large_image_source_openjpeg
      - ./large_image/girder/girder_large_image:/opt/large_image/girder/girder_large_image
      - ./large_image/girder_annotation/girder_large_image_annotation:/opt/large_image/girder_annotation/girder_large_image_annotation
      - ./HistomicsUI/histomicsui:/opt/HistomicsUI/histomicsui
      - ./HistomicsUI/sample_data:/opt/HistomicsUI/sample_data
    build:
      context: .
      dockerfile: ./histomicsui.Dockerfile
    platform: linux/amd64

  worker:
    environment:
      - GIRDER_WORKER_BROKER=amqp://rabbitmq:5672
    command: girder-worker
    volumes:
      - ./HistomicsUI/histomicsui:/opt/histomicsui/histomicsui
    build:
      context: .
      dockerfile: ./worker.Dockerfile
    platform: linux/amd64


volumes:
  db:
  assetstore:
  rabbitmq: