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GloBI Review by Elton GloBI

Configuration to help Global Biotic Interactions (GloBI, https://globalbioticinteractions.org) index:

Nick Balfour, Maria Clara Castellanos, Chris Johnson, Dave Goulson, Andrew Philippides. 2023. The Database of Pollinator Interactions (DoPI). Accessed at https://www.sussex.ac.uk/lifesci/ebe/dopi/ on 2023-12-01.

"The Database of Pollinator Interactions (DoPI) documents British pollinator-plant associations. DoPI unites the disparate publications currently scattered throughout the scientific literature with unpublished reports and databases into a single online depository." - https://www.sussex.ac.uk/lifesci/ebe/dopi/ accessed at 2023-12-01

Methods

run

./make.sh

using a bash terminal with jq, curl, mlr, sed, and tr installed.

If all goes well, the script will produce (or update):

dopi.txt - text produced by DoPI website to generate the main index of plant-pollinator interactions interactions.tsv - a tab-separated table derived from dopi.txt

⚠️ Note this this information contains only a fraction of the wealth of data contained by DoPI. Please refer to the website to find ways to access this data.