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adding details pulldown to selected lessons #19

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mistrm82 opened this issue Dec 5, 2017 · 3 comments
Open

adding details pulldown to selected lessons #19

mistrm82 opened this issue Dec 5, 2017 · 3 comments

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@mistrm82
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mistrm82 commented Dec 5, 2017

This is an HTML tag taht would be useful for "try it on your own" sections, where the code is hidden initially but clicking on it will make it available

```bash $ idr --samples Pou5f1-rep1_sorted_peaks.narrowPeak Pou5f1-rep2_sorted_peaks.narrowPeak \ --input-file-type narrowPeak \ --rank p.value \ --output-file Pou5f1-idr \ --plot \ --log-output-file pou5f1.idr.log ```

@mistrm82 mistrm82 added this to the chipseq 2.0 milestone Dec 5, 2017
@mistrm82 mistrm82 self-assigned this Dec 5, 2017
@rkhetani
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rkhetani commented Dec 5, 2017

<details>
<pre>
<code>
## plot using ggplot2

ggplot(melted_top20_sigOE) +
geom_point(aes(x = gene, y = normalized_counts, color = sampletype)) +
scale_y_log10() +
xlab("Genes") +
ylab("Normalized Counts") +
ggtitle("Top 20 Significant DE Genes") +
theme_bw() +
theme(axis.text.x = element_text(angle = 45, hjust = 1)) +
theme(plot.title=element_text(hjust=0.5))
</code>
</pre>
</details>

@rkhetani
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rkhetani commented Dec 5, 2017

The method listed above works nicely for html rendered markdown, looks a little funky without rendering.

@mistrm82
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mistrm82 commented Jul 3, 2018

Does anyone want to take a stab at this? It would be nice feature to have

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