From 83d7ba0a3423839ab55227371227c38e20d94020 Mon Sep 17 00:00:00 2001 From: GitHub Actions Date: Fri, 1 Nov 2024 07:40:51 +0000 Subject: [PATCH] Automated schema changes --- .../slam/prerelease/HED_slam_1.0.0.mediawiki | 27 ++- .../slam/prerelease/HED_slam_1.0.0.xml | 201 ++++++++++++++++++ .../HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv | 70 +++--- 3 files changed, 262 insertions(+), 36 deletions(-) diff --git a/library_schemas/slam/prerelease/HED_slam_1.0.0.mediawiki b/library_schemas/slam/prerelease/HED_slam_1.0.0.mediawiki index 6aae5c5..619725d 100644 --- a/library_schemas/slam/prerelease/HED_slam_1.0.0.mediawiki +++ b/library_schemas/slam/prerelease/HED_slam_1.0.0.mediawiki @@ -6,17 +6,42 @@ The HED SLAM(Sensor Location and Motion) HED library schema is designed to stand !# start schema '''Anatomical-landmark''' {rooted=Anatomical-item} [A collection of specific points on the human body used for anatomical and sensor placement reference.] +* Abdomen-landmark [Points on the abdomen used as reference landmarks.] +** Anterior-Superior-Iliac-Spine-ASIS [The forwardmost point of the iliac crest.] +** Posterior-Superior-Iliac-Spine-PSIS [The rearmost point of the iliac crest.] +** Umbilicus [The navel or belly button.] +* Foot-landmark [Points on the foot used as reference landmarks.] +** Calcaneal-Tuberosity-CT [The bony prominence at the heel.] +** First-Metatarsal-Head-FMH [The tip of the big toe.] +** Lateral-Malleolus-LM [The bony prominence on the lateral side of the ankle.] +** Medial-Malleolus-MM [The bony prominence on the medial side of the ankle.] +* Forearm-landmark [Points on the forearm used as reference landmarks.] +** Radial-Styloid-Process-RSP [The bony prominence on the radius bone at the wrist.] +** Ulnar-Styloid-Process-USP [The bony prominence on the ulna bone at the wrist.] +* Hand-landmark [Points on the hand used as reference landmarks.] +** Third-Metacarpophalangeal-Joint-MCP [The knuckle of the middle finger.] * Head-landmark [Points on the head used as reference landmarks.] ** Inion [The most prominent point of the occipital bone at the back of the head.] ** Left-helix-tragus-junction-LHJ [The point where the helix meets the tragus of the left ear.] -** Mastoid-process +** Mastoid-process [The process of the temporal bone behind the ear.] +** Midpoint-between-mastoid-processes-MMP [The midpoint between the mastoid processes.] ** Nasion [The midpoint between the eyes just above the bridge of the nose.] ** Right-helix-tragus-junction-RHJ [The point where the helix meets the tragus of the right ear.] ** Vertex [The highest point on the head in the midline.] +* Lower-leg-landmark [Points on the lower leg used as reference landmarks.] +** Tibial-Tuberosity [The bony prominence on the tibia at the knee.] +* Thigh-landmark [Points on the thigh used as reference landmarks.] +** Femur-Lateral-Epicondyle-FLE [The lateral epicondyle of the femur.] +** Femur-Medial-Epicondyle-FME [The medial epicondyle of the femur.] +** Greater-Trochanter [The large prominence at the proximal end of the femur.] * Torso-chest-landmark [Points on the chest used as reference landmarks.] ** Acromion-process [The outermost point of the shoulder blade.] +** Suprasternal-Notch-Jugular-Notch [The notch at the top of the sternum.] ** Vertebra-prominens-C7 [The seventh cervical vertebra at the base of the neck.] ** Xiphoid-process [The small cartilaginous process at the lower end of the sternum.] +* Upper-arm-landmark [Points on the upper arm used as reference landmarks.] +** Lateral-Humerus-Epicondyle-LHE [The lateral epicondyle of the humerus.] +** Medial-Humerus-Epicondyle-MHE [The medial epicondyle of the humerus.] !# end schema diff --git a/library_schemas/slam/prerelease/HED_slam_1.0.0.xml b/library_schemas/slam/prerelease/HED_slam_1.0.0.xml index 06ffb5e..6b98c2e 100644 --- a/library_schemas/slam/prerelease/HED_slam_1.0.0.xml +++ b/library_schemas/slam/prerelease/HED_slam_1.0.0.xml @@ -1512,6 +1512,118 @@ inLibrary slam + + Abdomen-landmark + Points on the abdomen used as reference landmarks. + + inLibrary + slam + + + Anterior-Superior-Iliac-Spine-ASIS + The forwardmost point of the iliac crest. + + inLibrary + slam + + + + Posterior-Superior-Iliac-Spine-PSIS + The rearmost point of the iliac crest. + + inLibrary + slam + + + + Umbilicus + The navel or belly button. + + inLibrary + slam + + + + + Foot-landmark + Points on the foot used as reference landmarks. + + inLibrary + slam + + + Calcaneal-Tuberosity-CT + The bony prominence at the heel. + + inLibrary + slam + + + + First-Metatarsal-Head-FMH + The tip of the big toe. + + inLibrary + slam + + + + Lateral-Malleolus-LM + The bony prominence on the lateral side of the ankle. + + inLibrary + slam + + + + Medial-Malleolus-MM + The bony prominence on the medial side of the ankle. + + inLibrary + slam + + + + + Forearm-landmark + Points on the forearm used as reference landmarks. + + inLibrary + slam + + + Radial-Styloid-Process-RSP + The bony prominence on the radius bone at the wrist. + + inLibrary + slam + + + + Ulnar-Styloid-Process-USP + The bony prominence on the ulna bone at the wrist. + + inLibrary + slam + + + + + Hand-landmark + Points on the hand used as reference landmarks. + + inLibrary + slam + + + Third-Metacarpophalangeal-Joint-MCP + The knuckle of the middle finger. + + inLibrary + slam + + + Head-landmark Points on the head used as reference landmarks. @@ -1537,6 +1649,15 @@ Mastoid-process + The process of the temporal bone behind the ear. + + inLibrary + slam + + + + Midpoint-between-mastoid-processes-MMP + The midpoint between the mastoid processes. inLibrary slam @@ -1567,6 +1688,54 @@ + + Lower-leg-landmark + Points on the lower leg used as reference landmarks. + + inLibrary + slam + + + Tibial-Tuberosity + The bony prominence on the tibia at the knee. + + inLibrary + slam + + + + + Thigh-landmark + Points on the thigh used as reference landmarks. + + inLibrary + slam + + + Femur-Lateral-Epicondyle-FLE + The lateral epicondyle of the femur. + + inLibrary + slam + + + + Femur-Medial-Epicondyle-FME + The medial epicondyle of the femur. + + inLibrary + slam + + + + Greater-Trochanter + The large prominence at the proximal end of the femur. + + inLibrary + slam + + + Torso-chest-landmark Points on the chest used as reference landmarks. @@ -1582,6 +1751,14 @@ slam + + Suprasternal-Notch-Jugular-Notch + The notch at the top of the sternum. + + inLibrary + slam + + Vertebra-prominens-C7 The seventh cervical vertebra at the base of the neck. @@ -1599,6 +1776,30 @@ + + Upper-arm-landmark + Points on the upper arm used as reference landmarks. + + inLibrary + slam + + + Lateral-Humerus-Epicondyle-LHE + The lateral epicondyle of the humerus. + + inLibrary + slam + + + + Medial-Humerus-Epicondyle-MHE + The medial epicondyle of the humerus. + + inLibrary + slam + + + Body diff --git a/library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv b/library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv index 8a2369b..69c510e 100644 --- a/library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv +++ b/library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv @@ -1,38 +1,38 @@ hedId rdfs:label Level omn:SubClassOf Attributes dc:description omn:EquivalentTo Annotations - Anatomical-landmark 0 Anatomical-item rooted=Anatomical-item A collection of specific points on the human body used for anatomical and sensor placement reference. dc:source "Original", rdfs:comment "Body landmarks are used to standardize sensor placement." - Head-landmark 1 Anatomical-landmark Points on the head used as reference landmarks. dc:source "Original" - Inion 2 Head-landmark The most prominent point of the occipital bone at the back of the head. obo:has_dbxref "NCIT:C32628", obo:has_dbxref "FMA:76624", obo:has_dbxref "UBERON:0013469" + Anatomical-landmark 0 Anatomical-item rooted=Anatomical-item A collection of specific points on the human body used for anatomical and sensor placement reference. + Abdomen-landmark 1 Anatomical-landmark Points on the abdomen used as reference landmarks. + Anterior-Superior-Iliac-Spine-ASIS 2 Abdomen-landmark The forwardmost point of the iliac crest. + Posterior-Superior-Iliac-Spine-PSIS 2 Abdomen-landmark The rearmost point of the iliac crest. + Umbilicus 2 Abdomen-landmark The navel or belly button. + Foot-landmark 1 Anatomical-landmark Points on the foot used as reference landmarks. + Calcaneal-Tuberosity-CT 2 Foot-landmark The bony prominence at the heel. + First-Metatarsal-Head-FMH 2 Foot-landmark The tip of the big toe. + Lateral-Malleolus-LM 2 Foot-landmark The bony prominence on the lateral side of the ankle. + Medial-Malleolus-MM 2 Foot-landmark The bony prominence on the medial side of the ankle. + Forearm-landmark 1 Anatomical-landmark Points on the forearm used as reference landmarks. + Radial-Styloid-Process-RSP 2 Forearm-landmark The bony prominence on the radius bone at the wrist. + Ulnar-Styloid-Process-USP 2 Forearm-landmark The bony prominence on the ulna bone at the wrist. + Hand-landmark 1 Anatomical-landmark Points on the hand used as reference landmarks. + Third-Metacarpophalangeal-Joint-MCP 2 Hand-landmark The knuckle of the middle finger. + Head-landmark 1 Anatomical-landmark Points on the head used as reference landmarks. + Inion 2 Head-landmark The most prominent point of the occipital bone at the back of the head. Left-helix-tragus-junction-LHJ 2 Head-landmark The point where the helix meets the tragus of the left ear. - Mastoid-process 2 Head-landmark The process of the temporal bone behind the ear. obo:has_dbxref "NCIT:C12503", obo:has_dbxref "FMA:52872", obo:has_dbxref "UBERON:0011220" - Nasion 2 Head-landmark The midpoint between the eyes just above the bridge of the nose. obo:has_dbxref "FMA:264779", obo:has_dbxref "UBERON:0016418" + Mastoid-process 2 Head-landmark The process of the temporal bone behind the ear. + Midpoint-between-mastoid-processes-MMP 2 Head-landmark The midpoint between the mastoid processes. + Nasion 2 Head-landmark The midpoint between the eyes just above the bridge of the nose. Right-helix-tragus-junction-RHJ 2 Head-landmark The point where the helix meets the tragus of the right ear. - Vertex 2 Head-landmark The highest point on the head in the midline. obo:has_dbxref "FMA:46484", obo:has_dbxref "UBERON:1000019" - Midpoint-between-mastoid-processes-MMP 2 Head-landmark The midpoint between the mastoid processes. dc:source "Original" - Torso-chest-landmark 1 Anatomical-landmark Points on the chest used as reference landmarks. dc:source "Original" - Acromion-process 2 Torso-chest-landmark The outermost point of the shoulder blade. obo:has_dbxref "NCIT:C32048", obo:has_dbxref "FMA:23260", obo:has_dbxref "UBERON:0002497" - Vertebra-prominens-C7 2 Torso-chest-landmark The seventh cervical vertebra at the base of the neck. obo:has_dbxref "NCIT:C32245", obo:has_dbxref "FMA:12525", obo:has_dbxref "UBERON:0004616" - Xiphoid-process 2 Torso-chest-landmark The small cartilaginous process at the lower end of the sternum. obo:has_dbxref "NCIT:C33895", obo:has_dbxref "FMA:7488", obo:has_dbxref "UBERON:0002207" - Suprasternal-Notch-Jugular-Notch 2 Torso-chest-landmark The notch at the top of the sternum. obo:has_dbxref "FMA:7542" - Abdomen-landmark 1 Anatomical-landmark Points on the abdomen used as reference landmarks. dc:source "Original" - Umbilicus 2 Abdomen-landmark The navel or belly button. obo:has_dbxref "NCIT:C77533", obo:has_dbxref "FMA:61584", obo:has_dbxref "UBERON:0007118" - Anterior-Superior-Iliac-Spine-ASIS 2 Abdomen-landmark The forwardmost point of the iliac crest. obo:has_dbxref "NCIT:C139187", obo:has_dbxref "FMA:49465", obo:has_dbxref "UBERON:0013708" - Posterior-Superior-Iliac-Spine-PSIS 2 Abdomen-landmark The rearmost point of the iliac crest. obo:has_dbxref "NCIT:C139206", obo:has_dbxref "FMA:49468", obo:has_dbxref "UBERON:0013710" - Hand-landmark 1 Anatomical-landmark Points on the hand used as reference landmarks. dc:source "Original" - Third-Metacarpophalangeal-Joint-MCP 2 Hand-landmark The knuckle of the middle finger. obo:has_dbxref "NCIT:C102318", obo:has_dbxref "FMA:35255", obo:has_dbxref "UBERON:0007741" - Upper-arm-landmark 1 Anatomical-landmark Points on the upper arm used as reference landmarks. dc:source "Original" - Medial-Humerus-Epicondyle-MHE 2 Upper-arm-landmark The medial epicondyle of the humerus. obo:has_dbxref "FMA:23441", obo:has_dbxref "UBERON:0006806" - Lateral-Humerus-Epicondyle-LHE 2 Upper-arm-landmark The lateral epicondyle of the humerus. obo:has_dbxref "NCIT:C139202", obo:has_dbxref "FMA:23442", obo:has_dbxref "UBERON:0006807" - Forearm-landmark 1 Anatomical-landmark Points on the forearm used as reference landmarks. dc:source "Original" - Radial-Styloid-Process-RSP 2 Forearm-landmark The bony prominence on the radius bone at the wrist. obo:has_dbxref "FMA:23524", obo:has_dbxref "UBERON:7500078" - Ulnar-Styloid-Process-USP 2 Forearm-landmark The bony prominence on the ulna bone at the wrist. obo:has_dbxref "FMA:23628", obo:has_dbxref "UBERON:0011575" - Thigh-landmark 1 Anatomical-landmark Points on the thigh used as reference landmarks. dc:source "Original" - Greater-Trochanter 2 Thigh-landmark The large prominence at the proximal end of the femur. obo:has_dbxref "NCIT:C32698", obo:has_dbxref "FMA:7540", obo:has_dbxref "UBERON:0002503" - Femur-Medial-Epicondyle-FME 2 Thigh-landmark The medial epicondyle of the femur. obo:has_dbxref "FMA:32864", obo:has_dbxref "UBERON:0009987" - Femur-Lateral-Epicondyle-FLE 2 Thigh-landmark The lateral epicondyle of the femur. obo:has_dbxref "FMA:32867", obo:has_dbxref "UBERON:0009986" - Lower-leg-landmark 1 Anatomical-landmark Points on the lower leg used as reference landmarks. dc:source "Original" - Tibial-Tuberosity 2 Lower-leg-landmark The bony prominence on the tibia at the knee. obo:has_dbxref "FMA:35463", obo:has_dbxref "UBERON:7500062" - Foot-landmark 1 Anatomical-landmark Points on the foot used as reference landmarks. dc:source "Original" - Calcaneal-Tuberosity-CT 2 Foot-landmark The bony prominence at the heel. obo:has_dbxref "NCIT:C142295", obo:has_dbxref "FMA:33640", obo:has_dbxref "UBERON:7500094" - First-Metatarsal-Head-FMH 2 Foot-landmark The tip of the big toe. obo:has_dbxref "FMA:42983" - Lateral-Malleolus-LM 2 Foot-landmark The bony prominence on the lateral side of the ankle. obo:has_dbxref "FMA:35502", obo:has_dbxref "UBERON:0012291" - Medial-Malleolus-MM 2 Foot-landmark The bony prominence on the medial side of the ankle. obo:has_dbxref "FMA:35451" \ No newline at end of file + Vertex 2 Head-landmark The highest point on the head in the midline. + Lower-leg-landmark 1 Anatomical-landmark Points on the lower leg used as reference landmarks. + Tibial-Tuberosity 2 Lower-leg-landmark The bony prominence on the tibia at the knee. + Thigh-landmark 1 Anatomical-landmark Points on the thigh used as reference landmarks. + Femur-Lateral-Epicondyle-FLE 2 Thigh-landmark The lateral epicondyle of the femur. + Femur-Medial-Epicondyle-FME 2 Thigh-landmark The medial epicondyle of the femur. + Greater-Trochanter 2 Thigh-landmark The large prominence at the proximal end of the femur. + Torso-chest-landmark 1 Anatomical-landmark Points on the chest used as reference landmarks. + Acromion-process 2 Torso-chest-landmark The outermost point of the shoulder blade. + Suprasternal-Notch-Jugular-Notch 2 Torso-chest-landmark The notch at the top of the sternum. + Vertebra-prominens-C7 2 Torso-chest-landmark The seventh cervical vertebra at the base of the neck. + Xiphoid-process 2 Torso-chest-landmark The small cartilaginous process at the lower end of the sternum. + Upper-arm-landmark 1 Anatomical-landmark Points on the upper arm used as reference landmarks. + Lateral-Humerus-Epicondyle-LHE 2 Upper-arm-landmark The lateral epicondyle of the humerus. + Medial-Humerus-Epicondyle-MHE 2 Upper-arm-landmark The medial epicondyle of the humerus.