Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

build Dataframe3.2.0 ERROR #318

Closed
1138886114 opened this issue Aug 1, 2024 · 3 comments
Closed

build Dataframe3.2.0 ERROR #318

1138886114 opened this issue Aug 1, 2024 · 3 comments

Comments

@1138886114
Copy link

cmake -DCMAKE_C_COMPILER=/usr/local/gcc/bin/gcc -DCMAKE_CXX_COMPILER=/usr/local/gcc/bin/g++ -DCMAKE_BUILD_TYPE=Debug -DHMDF_SANITY_EXCEPTIONS=1 -DHMDF_BENCHMARKS=1 -DHMDF_EXAMPLES=1 -DHMDF_TESTING=1 ..

-- The CXX compiler identification is GNU 14.1.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/gcc/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for clock_gettime
-- Looking for clock_gettime - found
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_C_COMPILER


-- Build files have been written to: /home/wangsp/DataFrame-3.2.0/Debug
[wangsp@localhost Debug]$
[wangsp@localhost Debug]$ make -j2
[  3%] Building CXX object CMakeFiles/DataFrame.dir/src/Utils/DateTime.cc.o
[  6%] Linking CXX static library libDataFrame.a
[  6%] Built target DataFrame
[  9%] Building CXX object test/CMakeFiles/dataframe_tester_2.dir/dataframe_tester_2.cc.o
[ 12%] Building CXX object test/CMakeFiles/dataframe_tester.dir/dataframe_tester.cc.o
In file included from /usr/local/gcc/include/c++/14.1.0/x86_64-pc-linux-gnu/bits/c++config.h:887,
                 from /usr/local/gcc/include/c++/14.1.0/limits:42,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/Utils/AlignedAllocator.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/Vectors/HeteroVector.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrameTypes.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrameStatsVisitors.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrame.h:32,
                 from /home/wangsp/DataFrame-3.2.0/test/dataframe_tester.cc:28:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_unique(_RandomAccessIterator, _RandomAccessIterator, _BinaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:1219:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 1219 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_partition(_RandomAccessIterator, _RandomAccessIterator, _UnaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:1929:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 1929 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_stable_partition(_RandomAccessIterator, _RandomAccessIterator, _UnaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2029:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2029 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/gcc/include/c++/14.1.0/x86_64-pc-linux-gnu/bits/c++config.h:887,
                 from /usr/local/gcc/include/c++/14.1.0/limits:42,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/Utils/AlignedAllocator.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/Vectors/HeteroVector.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrameTypes.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrameStatsVisitors.h:32,
                 from /home/wangsp/DataFrame-3.2.0/include/DataFrame/DataFrame.h:32,
                 from /home/wangsp/DataFrame-3.2.0/test/dataframe_tester_2.cc:28:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_unique(_RandomAccessIterator, _RandomAccessIterator, _BinaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:1219:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 1219 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_partition(_RandomAccessIterator, _RandomAccessIterator, _UnaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:1929:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 1929 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_merge(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2715:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2715 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘void __pstl::__internal::__brick_inplace_merge(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2764:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2764 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial")
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator __pstl::__internal::__brick_stable_partition(_RandomAccessIterator, _RandomAccessIterator, _UnaryPredicate, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2029:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2029 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_OutputIterator __pstl::__internal::__brick_set_union(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _OutputIterator, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3141:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3141 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_merge(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2715:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2715 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘void __pstl::__internal::__brick_inplace_merge(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:2764:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 2764 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial")
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_intersection(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3202:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3202 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_difference(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3298:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3298 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_OutputIterator __pstl::__internal::__brick_set_union(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _OutputIterator, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3141:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3141 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_symmetric_differenc (_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3390:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3390 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_intersection(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3202:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3202 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_difference(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3298:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3298 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
      |     ^~~~~~~~~~~~~~~~~~~~
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h: In function ‘_RandomAccessIterator3 __pstl::__internal::__brick_set_symmetric_differenc (_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _RandomAccessIterator2, _RandomAccessIterator3, _Compare, std::true_type)’:
/usr/local/gcc/include/c++/14.1.0/pstl/algorithm_impl.h:3390:5: note: ‘#pragma message:  [Parallel STL message]: "Vectorized algorithm unimplemented, redirected to serial"’
 3390 |     _PSTL_PRAGMA_MESSAGE("Vectorized algorithm unimplemented, redirected to serial");
@hosseinmoein
Copy link
Owner

hosseinmoein commented Aug 1, 2024

This is your compiler's problem. I would change to a different compiler version or a different compiler.

Also see: https://stackoverflow.com/questions/77636938/c-parallel-stl-vectorized-algorithm-not-implemented-p2408

Also these are not errors but warnings. I think everything was compiled and linked on your side but with serial algorithms.

@1138886114
Copy link
Author

This is your compiler's problem. I would change to a different compiler version or a different compiler.

Also see: https://stackoverflow.com/questions/77636938/c-parallel-stl-vectorized-algorithm-not-implemented-p2408

Also these are not errors but warnings. I think everything was compiled and linked on your side but with serial algorithms.

I encountered this state when compiling on two different machines, and there was no response for a long time (waiting for 15 minutes)

@hosseinmoein
Copy link
Owner

What your compiler is saying is that it doesn't have the STL parallel algorithms implemented and it is defaulting to serial algorithms. I don't have access to a compiler with that problem. And if I even had access, there is nothing I could do about it.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants