From 90c4b093d17b3f917aa037ca27ebaae8d1a11708 Mon Sep 17 00:00:00 2001 From: thkuo Date: Tue, 12 Oct 2021 06:40:17 +0200 Subject: [PATCH] update readme --- README.md | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index 593a805cd..80ad0f640 100644 --- a/README.md +++ b/README.md @@ -187,7 +187,7 @@ To only create the folder and config files, please turn off the last six options The folder *examples/* includes a structured zip file and a yaml file--the two input formats that Seq2Geno can recognize. The zip file can be used as the input with this command: ``` -S2G -z examples/example_input/seq2geno_input.yml\ +S2G -z examples/example_input/seq2geno_input.zip\ -l examples/example_input_zip.log\ --outzip g2p ``` @@ -257,14 +257,14 @@ We will be publishing the paper for the joint work of Seq2Geno and Geno2Pheno. Before that, please use ``` -Kuo, T.-H., Weimann, A., Bremges, A., & McHardy, A. C. (2021). Seq2Geno (v1.00001) [A reproducibility-aware, integrated package for microbial sequence analyses]. +Asgari*, E., Kuo*, T.-H., Bremges, A., Robertson, G., Weimann, A. & McHardy, A. C. (2021). Seq2Geno2Pheno [A Computational Workflow for Phenotype Predictive-Modeling and Biomarker Detection from Microbial Sequence Data] ``` or ``` -@software{thkuo2021seq2geno, - author = {Tzu-Hao Kuo, Aaron Weimann, Andreas Bremges, Alice C. McHardy}, - title = {Seq2Geno: a reproducibility-aware, integrated package for microbial sequence analyses}, - version = {v1.00001}, - date = {2021-06-20}, +@software{seq2geno2pheno2021, + author = {Ehsaneddin Asgari*, Tzu-Hao Kuo*, Andreas Bremges, Gary Robertson, Aaron Weimann, Alice C. McHardy}, + title = {Seq2Geno2Pheno: A Computational Workflow for Phenotype Predictive-Modeling and Biomarker Detection from Microbial Sequence Data}, + version = {v2.00001}, + date = {2021-07-07}, } ```