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WARS1 not recognized in demo data #446

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mvelinder opened this issue Nov 3, 2021 · 0 comments
Open

WARS1 not recognized in demo data #446

mvelinder opened this issue Nov 3, 2021 · 0 comments
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@mvelinder
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mvelinder commented Nov 3, 2021

Possibly a duplicate issue, but I couldn't find the original. We need to resolve this issue with the demo data. Using the provided clinical note and phenotype terms as is, when you get to variant prioritization you're immediately given an error about the gene name WARS1.

image

For someone using the demo data, this is a pretty bad first experience

Talked at iobio meeting on 12/7 and decided to try and manually change WARS1 to WARS, the alias that gene.iobio uses in the database and is an alias in genecards https://www.genecards.org/cgi-bin/carddisp.pl?gene=WARS1 -- will need a new release and backend changes for this it seemed

tonydisera added a commit that referenced this issue Jan 6, 2022
…hanged to its alias to prevent bypassing gene from analysis.
tonydisera added a commit that referenced this issue Jan 6, 2022
#446 Temporary workaround for clin.iobio demo so that WARS1 gene is c…
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