crop_nodule function

[sarahchandran]

I am unable to find the function crop_nodule in View_output.ipynb.
The function crop_nodule is called in function crop_patch.

[jaeho3690]

hello, sorry for the really really late reply. I don't know why I didn't receive any notifications..
For your question, yes it seems that I have omitted the function when committing. As far as I remember, crop patch
is a function that accepts the center of mass coordinate as the index and slices KxK patch with the center coordinate corresponding to center of mass. It should be something like this

def crop_patch(center_coord, mask,K=80):

   mask[:, center_coord_y-40:  center_coord_y+40]

something like the above. Hope you get what I mean

Thanks