Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Error infernal. #3

Open
227BaronChen opened this issue Jul 28, 2021 · 5 comments
Open

Error infernal. #3

227BaronChen opened this issue Jul 28, 2021 · 5 comments

Comments

@227BaronChen
Copy link

I installed Infernal according to the manual. But there is an error message saying that error occured while building Covariance Model (CM) from it.
image
@jaswindersingh2
Copy link
Owner

Is it possible to share the input sequence or .sto alignment file to reproduce the error?

@227BaronChen
Copy link
Author

In fact, this error occurred when I ran the ./run_spotrna2.sh sample_run/6ufj.fasta command. I am sorry for late reply.

@jaswindersingh2
Copy link
Owner

Okay, no worries.

I am looking into SPOT-RNA2 code and update you soon.

If possible, can you please share files in sample_run/6ufj_features folder?

@227BaronChen
Copy link
Author

I packaged the file into a .zip compressed package.
6ufj_features.zip

@227BaronChen
Copy link
Author

Could you tell me about your recent progress? Thx.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@jaswindersingh2 @227BaronChen