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Change Log

All notable changes to this project will be documented in this file. This project adheres to Semantic Versioning (http://semver.org/).

Unreleased

The Unreleased section will be empty for tagged releases. Unreleased functionality appears in the develop branch.

1.3.4 - 2023-02-16

  • Version bump to regenerate wheels with v2.6.1 parasail C library

1.3.3 - 2022-08-26

  • CI improvements - build all wheel targets in parallel - run tests as part of build
  • fix win_amd64 wheel builds

1.3.2 - 2022-08-25

  • Version bump to force rebuilding of wheels

1.3.1 - 2022-08-24

  • Fix macos wheel build
  • Add C parasail headers into wheels, add get_include() and get_library()

1.3 - 2022-08-22

  • Add bindings for sg_qb_db and sg_qe_de

1.2.4 - 2021-02-06

  • Fix #60 Missing wheels on PyPI

1.2.3 - 2020-12-16

  • Fix #57 Install error with parasail v1.2.2

1.2.2 - 2020-12-01

  • Fix #55 Error installing parasail on macos

1.2.1 - 2020-11-03

  • Fix #54 bug in ssw_init()

1.2 - 2020-02-26

  • Automated testsuite.
  • Fix wheel deployment.
  • Update email.

1.1.20 - 2020-02-25

  • Build wheels with cibuildwheel.
  • Fix #11 manylinux1 builds for pypi.

1.1.19 - 2019-11-12

  • Missed version bump during last release.

1.1.18 - 2019-11-12

  • Allow install without downloading and building C library, set evn var PARASAIL_SKIP_BUILD=1 to enable.

1.1.17 - 2019-04-29

  • Add wheel package as dependency.
  • Bump version to create new pypi release with latest 2.4.1 C library.

1.1.16 - 2019-02-14

  • AppVeyor now uses python35 to fix packaging issue. Fixes #33.

1.1.15 - 2019-02-12

  • Fix travis CI pypi deployment, again.

1.1.14 - 2019-02-11

  • Fix travis CI pypi deployment.

1.1.13 - 2019-02-11

  • Bindings up to date with 2.4 C library.
  • New semi-global routines.
  • Case-sensitive support.
  • Users may optionally set string encoding using parasail.set_encoding(name). Default remains 'latin_1'.

1.1.12 - 2018-07-12

  • Fix autotools build by updating automake version.
  • Add functions from latest 2.2 C library.

1.1.11 - 2018-03-06

  • Fix Cigar lifetime bug. Cigar instance now held by Result to avoid freeing C memory early.
  • Fix poor C library performance on OSX by disabling multiarch build.

1.1.10 - 2018-01-16

  • Bump version to create new pypi release with latest 2.1 C library.

1.1.9 - 2018-01-16

  • Fix compatibility with 2.1.x C parasail release series - configure script, if missing, must be generated using autoreconf -fi - download autotools if missing
  • Fix another Python3 issue with Cigar. Fixes #16 again.

1.1.8 - 2018-01-09

  • Fix relative import statements. Fixes #13.
  • Fix Python3 issues with Profile. Fixes #14.
  • Fix Python3 issues with Cigar. Fixes #15, #16.

1.1.7 - 2017-10-18

  • Bump version to create new pypi release with latest 2.0.2 C library.

1.1.6 - 2017-10-03

  • Fix #10.

1.1.5 - 2017-09-29

  • Add travis build.
  • Add CHANGELOG.rst.
  • Add Cigar decode_op() decode_len() @staticmethods
  • Add bindings to the ssw emulation functions.
  • Add bindings to parasail_sequences_from_file(filename).
  • Add tests; use with pytest.
  • Fix the integer type for ssw cigar.
  • Fix the profile function return values.
  • Fix the table and rowcol properties.

1.1.4 - 2017-09-26

  • Py 2/3 compatible long_description field.

1.1.3 - 2017-09-26

  • Assign README.rst to long_description field.

1.1.2 - 2017-09-26

  • Create a new pypi release that didn't fail like the last one did.

1.1.1 - 2017-09-26

  • Expanded README.rst.
  • pypi upload using twine now skips existing files.

1.1.0 - 2017-09-26

First tagged release. The 'master' branch always represents the latest stable code. Tagged releases correspond to pypi releases.