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Files are overwritten on the second pass #128
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participants.json
is overwritten on the second pass
Good catch and yes, bidskit shouldn't be overwriting user edited files like these top-level JSONs. Working on a fix now. |
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When running bidskit for the second time using the following command,
bidskit -d {data_dir} -subj {subjects_to_convert} -sess {sessions_to_convert}
the file
participants.json
anddataset_description.json
are overwritten, even if I've set them myself. Then, bids-validator obviously complains as the columns of theparticipants.tsv
are not described anddataset_description.json
containing empty fields...Should'nt bidskit detect if pre-existing files exist before overwriting them?
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