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DESCRIPTION
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DESCRIPTION
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Package: scTEI
Type: Package
Title: add any phylogenetically based transcriptome evolutionary index (TEI) to
single-cell data objects
Version: 0.1.0
Authors@R:
person(given = "Kristian K",
family = "Ullrich",
role = c("aut", "cre"),
email = "ullrich@evolbio.mpg.de",
comment = c(ORCID = "0000-0003-4308-9626"))
Description: scTEI add any phylogenetically based transcriptome evolutionary
index (TEI) to single-cell data objects
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: false
Depends:
R (>= 4.2.0)
Imports:
Rcpp (>= 1.0.8.3),
Matrix,
ggplot2,
viridis,
cowplot,
ComplexHeatmap,
myTAI
Suggests:
rmarkdown,
knitr,
devtools,
testthat,
readr,
Seurat,
SeuratData,
Matrix.utils,
BiocGenerics,
DelayedArray,
DelayedMatrixStats,
limma,
S4Vectors,
SingleCellExperiment,
SummarizedExperiment,
batchelor,
org.Hs.eg.db,
org.Mm.eg.db,
BiocStyle
LinkingTo:
Rcpp,
RcppArmadillo,
RcppThread,
cpp11
VignetteBuilder: knitr
NeedsCompilation: yes
SystemRequirements: C++11
URL: https://github.com/kullrich/scTEI
BugReports: https://github.com/kullrich/scTEI/issues
RoxygenNote: 7.2.1