Effect of branch-length linkage on Network inference

[lutteropp]

We need an additional experiment that investigates how the brlen-linkage (especially scaled vs. unlinked) affects the NetRAX inference results.

[stamatak]

yes, we do ...

…

On 07.12.20 15:18, Sarah Lutteropp wrote: We need an additional experiment that investigates how the brlen-linkage (especially scaled vs. unlinked) affects the NetRAX inference results. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#28>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAGXB6SDUHKDQXTDOJ2R2XDSTTIY5ANCNFSM4UQOKA6A>.

-- Alexandros (Alexis) Stamatakis Research Group Leader, Heidelberg Institute for Theoretical Studies Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology www.exelixis-lab.org

[lutteropp]

This issue is going into that direction: #33

There we have an example with a 4-taxon 1-reticulation network. Both displayed trees have the same topology, only one branch length can differ among them. Unlinked branch lengths will favor a tree, while linked or scaled branch lengths will favor a reticulation.