diff --git a/python/py-pyphant/Portfile b/python/py-pyphant/Portfile deleted file mode 100644 index f9ce5b2e78938..0000000000000 --- a/python/py-pyphant/Portfile +++ /dev/null @@ -1,194 +0,0 @@ -# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4 - -PortSystem 1.0 -PortGroup python 1.0 -PortGroup wxWidgets 1.0 - -name py-pyphant -version 1.0b3 -revision 1 -categories-append science -description python framework for analysing and managing scientific data -maintainers fmf.uni-freiburg.de:servicegruppe.wissinfo \ - {rowue @rowue} openmaintainer -long_description The python framework pyphant allows for the creation \ - and application of data flow models. The central idea \ - of this approach is to encapsulate each data processing \ - step in one unit which is called a worker. \ - A worker receives input via sockets and provides the \ - results of its data processing via plugs. These can be \ - inserted into other workers' sockets. The resulting \ - directed graph is called a recipe. Classes for these \ - objects comprise the Pyphant core. \ - To implement actual processing steps, Pyphant relies on \ - third party plug-ins, also referred to as toolboxes, \ - which extend the basic worker class, e.g. \ - py-pyphant-imageprocessing. \ - On top of the core, Pyphant offers a data exchange layer \ - on basis of numpy arrays which facilitates the \ - interoperability of the workers and fully supports \ - physical quantities with errors and units. \ - The third layer is a graphical user interface \ - allowing for the interactive construction of recipes \ - as well as the calculation and visualization of data \ - from any worker in the recipe. - -homepage http://www.fmf.uni-freiburg.de/service/servicegruppen/sg_wissinfo/projekte/Pyphant -license BSD - -platforms {darwin any} -supported_archs noarch - -distname pyphant -master_sites sourceforge:pyphant - -python.versions 27 - -if {${name} ne ${subport}} { - depends_build-append port:py${python.version}-setuptools - - if {[string match {py??-pyphant-*} ${subport}]} { - depends_lib-append port:py${python.version}-pyphant - } -} - -foreach python.vers ${python.versions} { - subport py${python.vers}-${distname} { - PortGroup app 1.0 - set python.version ${python.vers} - worksrcdir ${distname}-${version} - distfiles ${distname}-${version}${extract.suffix} - checksums rmd160 aa56f61a73300651730f867b249264e2ca63d200 \ - sha256 c873352467f9ecf96fac03082e3cbc4153d13f8103e5339e608897884867db53 - - app.name pyphant-${python.branch} - app.executable pyphant-${python.branch} - app.icon ${filespath}/Pyphant.icns - - wxWidgets.use wxPython-3.0 - - depends_lib-append port:py${python.version}-numpy \ - port:py${python.version}-scipy \ - port:py${python.version}-tables \ - port:py${python.version}-matplotlib \ - port:py${python.version}-simplejson \ - port:py${python.version}-paste \ - port:py${python.version}-mx-base \ - port:py${python.version}-sogl \ - port:py${python.version}-wxpython-3.0 - - depends_run-append port:py${python.version}-configobj \ - port:py${python.version}-tornado - - pre-destroot { - file copy ${filespath}/pyphant.quartz ${destroot}${prefix}/bin - file rename ${destroot}${prefix}/bin/pyphant.quartz ${destroot}${prefix}/bin/pyphant-${python.branch} - reinplace "s|@PREFIX@|${prefix}|" ${destroot}${prefix}/bin/pyphant-${python.branch} - reinplace "s|@PYTHONBRANCH@|${python.branch}|" ${destroot}${prefix}/bin/pyphant-${python.branch} - } - } - - subport py${python.vers}-${distname}-fmf { - set python.version ${python.vers} - description Full-Metadata Format toolbox for py${python.version}-pyphant - long_description This toolbox enables the py${python.version}-pyphant framework to read \ - files written in the Full-Metadata Format (FMF). \ - See http://arxiv.org/abs/0904.1299 for an introduction \ - to the FMF. There is also support for writing files \ - in the FMF, although this feature is currently not \ - accessible from the pyphant GUI. - - distname ${distname}.fmf-${version} - checksums rmd160 42d70609400f636b2c4ffced5e5f2192f76ac4ad \ - sha256 8ef7acf200f6a7a8805d4f91680fd771129f1c68178d8d710b7a9a322267cdfc - } - - subport py${python.vers}-${distname}-imageprocessing { - set python.version ${python.vers} - description imageprocessing toolbox for py${python.version}-pyphant - long_description This toolbox provides a set of imageprocessing workers, \ - i.e. encapsulated data processing steps for the \ - py${python.version}-pyphant framework. Currently there are 22 workers \ - providing operations varying from simple functions like \ - 'inversion' or some scipy.ndimage filters to more complex \ - operations, e.g. auto-focus evaluation of transmitted \ - light microscopy photographs. - - distname ${distname}.imageprocessing-${version} - checksums rmd160 e4d160989c0e5b07528577052dd451b47828a7d4 \ - sha256 9e1619cf3abbe94ce785b9b5b02383b5a31f9ba2ef0bc75922c785195620229f - revision 2 - - # numpy and scipy are already dependencies of pyphant - depends_lib-append port:py${python.version}-Pillow \ - port:py${python.version}-numpy \ - port:py${python.version}-scipy - - patchfiles Pillow_patch-setup.py.diff \ - Pillow_patch-pyphant.imageprocessing.egg-info-requires.txt.diff - - variant pil description {Use PIL instead of Pillow as the imaging library} { - depends_lib-replace port:py${python.version}-Pillow port:py${python.version}-pil - - patchfiles-delete Pillow_patch-setup.py.diff - patchfiles-delete Pillow_patch-pyphant.imageprocessing.egg-info-requires.txt.diff - } - - if {![catch {set pil_installed [lindex [registry_active py${python.version}-pil] 0]}]} { - default_variants +pil - } - } - - subport py${python.vers}-${distname}-osc { - set python.version ${python.vers} - description organic solar cells toolbox for py${python.version}-pyphant - long_description This Toolbox offers various workers for the \ - analysis of organic solar cells. It is joined \ - work with Kristian O. Sylvester-Hvid from the \ - Risø National Laboratory for Sustainable Energy. \ - The main purpose at the moment is the generation \ - of height maps for polymer based solar cells. \ - The developed workers are however applicable in \ - a wide range of problems. - - distname ${distname}.osc-${version} - checksums rmd160 1093b2a9b036648f76089f5d1b919186b7a2dd2c \ - sha256 ba573aaa5cb78c4f692798e2c6845f4a0b11b99d721905be56c47db1885d3e67 - - depends_lib-append port:py${python.version}-numpy \ - port:py${python.version}-scipy \ - port:py${python.version}-matplotlib - } - - subport py${python.vers}-${distname}-statistics { - set python.version ${python.vers} - description statistics toolbox for py${python.version}-pyphant - long_description This toolbox provides the histogram worker which enables \ - the py${python.version}-pyphant framework to obtain histograms from \ - array-like data. - - distname ${distname}.statistics-${version} - checksums rmd160 893f87f8d9b206a71a963ba30be37e2fd4bb002f \ - sha256 ae71e825508fe74c88693108a7bc0612416fdabb1e71442c815ccbfe2b37c7cb - - depends_lib-append port:py${python.version}-numpy \ - port:py${python.version}-scipy - } - - subport py${python.vers}-${distname}-tools { - set python.version ${python.vers} - description tools toolbox for py${python.version}-pyphant - long_description This toolbox currently provides two workers for the \ - py${python.version}-pyphant framework. These workers can be integrated \ - in a data flow model and simply serve as data sources for \ - data that is managed by a py${python.version}-pyphant core module called \ - KnowledgeManager (KM). The KM accumulates metadata in a \ - sqlite3 database and the above mentioned workers present \ - parameters to perform a metadata search and finally \ - load and provide the data that matched the search. - - distname ${distname}.tools-${version} - checksums rmd160 7eabbd970968bd118a9fd93670bf79e48790d130 \ - sha256 1d97e9b5b798047aa529148e8c5356cdbc61a3333394b5e72e8cf6b429c3b23f - } -} diff --git a/python/py-pyphant/files/Info.plist b/python/py-pyphant/files/Info.plist deleted file mode 100644 index 15cb6cfe5bbed..0000000000000 --- a/python/py-pyphant/files/Info.plist +++ /dev/null @@ -1,30 +0,0 @@ - - - - - CFBundleDevelopmentRegion - English - CFBundleExecutable - Pyphant - CFBundleGetInfoString - Pyphant @VERSION@ by freiburger center of materials research. This program is licensed under the BSD license. - CFBundleIconFile - Pyphant.icns - CFBundleIdentifier - net.Pyphant - CFBundleInfoDictionaryVersion - 6.0 - CFBundleName - Pyphant - CFBundlePackageType - APPL - CFBundleShortVersionString - Pyphant @VERSION@ - CFBundleSignature - Pyphant - CFBundleVersion - @VERSION@ - CSResourcesFileMapped - - - diff --git a/python/py-pyphant/files/Pillow_patch-pyphant.imageprocessing.egg-info-requires.txt.diff b/python/py-pyphant/files/Pillow_patch-pyphant.imageprocessing.egg-info-requires.txt.diff deleted file mode 100644 index 24fd3b92d89bb..0000000000000 --- a/python/py-pyphant/files/Pillow_patch-pyphant.imageprocessing.egg-info-requires.txt.diff +++ /dev/null @@ -1,9 +0,0 @@ ---- pyphant.imageprocessing.egg-info/requires.txt.orig 2014-02-24 19:00:45.000000000 +0100 -+++ pyphant.imageprocessing.egg-info/requires.txt 2014-07-30 11:15:48.000000000 +0200 -@@ -1,4 +1,4 @@ - pyphant>=1.0b3 --PIL -+Pillow - numpy - scipy -\ No newline at end of file diff --git a/python/py-pyphant/files/Pillow_patch-setup.py.diff b/python/py-pyphant/files/Pillow_patch-setup.py.diff deleted file mode 100644 index 8f6dc6c2bd155..0000000000000 --- a/python/py-pyphant/files/Pillow_patch-setup.py.diff +++ /dev/null @@ -1,11 +0,0 @@ ---- setup.py.orig 2014-02-24 18:49:04.000000000 +0100 -+++ setup.py 2014-07-30 11:06:06.000000000 +0200 -@@ -25,7 +25,7 @@ - description=__doc__, - install_requires=[ - 'pyphant>=1.0b3', -- 'PIL', -+ 'Pillow', - 'numpy', - 'scipy', - ], diff --git a/python/py-pyphant/files/Pyphant.icns b/python/py-pyphant/files/Pyphant.icns deleted file mode 100644 index 437989ca34677..0000000000000 Binary files a/python/py-pyphant/files/Pyphant.icns and /dev/null differ diff --git a/python/py-pyphant/files/pyphant.quartz b/python/py-pyphant/files/pyphant.quartz deleted file mode 100755 index 75a6f412f3bac..0000000000000 --- a/python/py-pyphant/files/pyphant.quartz +++ /dev/null @@ -1,5 +0,0 @@ -#!/bin/bash -LOGNAME=`logname` -export LOGNAME -cd $HOME -exec @PREFIX@/bin/wxPyphant-@PYTHONBRANCH@