NEWS.Rmd

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output: github_document
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# mlstrOpalr 1.0.3 (release : 2024-05-01)

## Bug fixes and improvements

* Some improvements in the documentation of the package has been made.
* Due to update in madshapR package, the name of objects used in examples has
been changed (madshapR_DEMO instead of DEMO_files)

# mlstrOpalr 1.0.2

## Creation of NEWS feed !!

Addition of `NEWS.md` for the development version use "(development version)".

## Bug fixes and improvements

* Some improvements in the documentation of the package has been made.
* New information in the taxonomy added (description of each fields)

# mlstrOpalr 1.0.0

This package is a collection of wrapper functions used in data pipelines 
connected to an Opal environment. This 'Opal' client is specifically designed 
to interact with 'Opal Maelstrom' distributions to perform operations on the 
R server side. The user must have adequate credentials.
Please see [Obiba website](https://opaldoc.obiba.org/) for complete documentation.

This is still a work in progress, so please let us know if you used a function 
before and is not working any longer.

## Helper functions

* `mlstrOpalr_help()` Call the help center for full documentation

## to connect to an Opal environment

* `opal_project_create()` Create a project in an Opal environment

* `opal_files_pull()`, `opal_files_push()` : Download/Upload files from/to an 
Opal environment.

* `opal_tables_pull()`, `opal_tables_push()` : Download/Upload tables from/to an 
Opal project as a dossier.

* `taxonomy_opal_get()` : Get available taxonomies in format used by Opal
* `taxonomy_opal_mlstr_get()`: Get available taxonomies in format used by 
Maelstrom Research

* `data_dict_opalr_fix()` Transform a data dictionary object from 'opalr' format to Opal format