diff --git a/vignettes/lcms_annotation_tutorial.Rmd b/vignettes/lcms_annotation_tutorial.Rmd index 4f290fd..a030855 100644 --- a/vignettes/lcms_annotation_tutorial.Rmd +++ b/vignettes/lcms_annotation_tutorial.Rmd @@ -70,8 +70,7 @@ pd #read in data with metadata df as phenodata all_data <- readMSData(files = fp, - pdata = new("NAnnotatedDataFrame", pd), - mode = "onDisk") + pdata = new("NAnnotatedDataFrame", pd)) ``` ### Filter by retention time