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Import TrackMate files in Mastodon #345

Merged
merged 4 commits into from
Nov 11, 2024
Merged

Import TrackMate files in Mastodon #345

merged 4 commits into from
Nov 11, 2024

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tinevez
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@tinevez tinevez commented Nov 10, 2024

Mastodon can now import TrackMate files.

It actually was already working before, without us noticing, thanks to the work on starting Mastodon with an image opened in Fiji. This PR improves over this existing functionality.

The launcher now makes it explicit that users can import MaMuT and TrackMate file with the same action:
mastodon_import_trackmate_02

If the user browses to a TrackMate file, it is opened normally, with all feature imported:
mastodon_import_trackmate_03
mastodon_import_trackmate_05

The BDV views wrap an ImagePlus, transparently for the user.
Upon saving, Mastodon offers to convert the source image to BDV (H5/XML). If the user declines, the image will still be opened as a normal Fiji image.
mastodon_import_trackmate_04

@tinevez tinevez merged commit 339294c into dev Nov 11, 2024
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@tinevez tinevez deleted the import-trackmate branch November 11, 2024 15:50
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