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snakePipes createEnvs fails #1016
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This is fixed in the develop branch, but not released yet. As a workaround you can pip install from develop. Do note you probably need to cap pulp as well (#991). |
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after performing installation steps as provided in docs
snakePipes createEnvs fails with
Creating environment from /work/project/becvil_004/miniconda3/envs/snakePipes/lib/python3.12/site-packages/snakePipes/shared/rules/envs/shared.yaml in /work/project/becvil_004/package/mamba/envs
usage: mamba [-h] command ...
mamba: error: unrecognized arguments: --force
There was an error when creating the environments!
any clues how I can solve the problem?
cluster running CentOS, mamba 1.5.7, conda 24.5.0
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