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neuromapp

The Neuronm(ini)app(lication)library reproduces the algorithms of the main software of the BBP as a collection of mini-apps For its first release, the Neuromapp framework focuses on CoreNeuron application.

The framework is organised under the form

neuronmapp/app

This directory neuromapp contains the main program (C++) that organises all the mini applications. A specific README is added, it gives directives for the plug of new applications.

neuronmapp/coreneuron_1.0

This directory contains miniapps (C) about the main behaviour of first release of coreneuron, 3 miniapps are available: kernel and solver

  • kernel: This miniapp extracts the computation kernel of CoreNeuron, the miniapp focuses on the vectorization by the compiler
  • solver: This miniapp extracts the linear algbra solver of CoreNeuron, the Hines solver (similar to Thomas Solver for 3 bands matrix)
  • cstep: It combines the kernel and the solver to mimic a step time of neuron simulator

neuromapp/queuing

This directory contains a miniapp that simulates the queueing system of CoreNeuron.

Moreover the hello directory provides informations to create a new miniapp

##hello

This directory provides an example of how could be design a miniapp (C++)

neuromapp/nest/synapse

This directory contains a miniapp that simulates synapse models from NEST.