modelWorkflow_inputs.json

{
  "modelWorkflow.run_Model.name_of_this_model_run": "flepimop",
  "modelWorkflow.run_Model.model_configuration_yml": "config_sample_2pop.yml",
  "modelWorkflow.run_Model.model_executable": "gempyor-simulate",
  "modelWorkflow.run_Model.model_input_folder": "model_input",

  "modelWorkflow.run_Model.model_git_repository": "https://github.com/HopkinsIDD/flepiMoP.git",
  "modelWorkflow.run_Model.model_output_folder": "model_output",
  "modelWorkflow.run_Model.model_output_file_types": "[parquet]",
  "modelWorkflow.run_Model.install_model_script": "./scripts/sh/flepimop/install_model.sh",
  "modelWorkflow.run_Model.run_model_script": "./scripts/sh/flepimop/run_model.sh",
  "modelWorkflow.run_Model.model_runtime_docker": "rocker/verse:latest",
  "modelWorkflow.setup_os_script": "./scripts/sh/setup_os.sh",
  "modelWorkflow.clone_repository_script": "./scripts/sh/clone_git_repository.sh",
  "modelWorkflow.copy_cromwell_logs_script": "./scripts/sh/copy_cromwell_logs.sh",
  "modelWorkflow.copy_model_output_script": "scripts/python/copy_model_output.py"
}