Custom library error #1561
Answered
by
mizraelson
bigcat1001
asked this question in
Q&A
-
When i tried build Custom library,I encountered two errors:
My question is what is correct format of C region? 2.The second error is "CDR3 does not end with W or F, was: CAC / H / CDR3End: 29".I am build Vicugna_pacos library using IMGT reference,does this error affect final performance? |
Beta Was this translation helpful? Give feedback.
Answered by
mizraelson
Feb 29, 2024
Replies: 1 comment 1 reply
-
Hi, do your C gene sequences contain N nucleotides? MiXCR requires unambiguity of all nucleotides while building the reference. |
Beta Was this translation helpful? Give feedback.
1 reply
Answer selected by
bigcat1001
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Hi, do your C gene sequences contain N nucleotides? MiXCR requires unambiguity of all nucleotides while building the reference.
The second message is a warning and should not affect the performance.