Capacity Planning while using GPU based Indices

[rohitreddy1698]

Hello,

I am trying to compare the performances of GPU vs CPU based indices in Milvus and have Milvus setup on GKE for the same.
I have deployed Milvus using the Milvus Operator.
I am trying to do the benchmarking using the Zilliz Vector DB Bench tool : https://github.com/zilliztech/VectorDBBench
I have
4 : e2-highmen-16 nodes ( for other components )
30 : n1-highmen-8 nodes ( 25 for queyrnode and 5 for indexnode ) with 2 T4 GPUs ( 16 GiB memory ) per node

The data set I am using is 100M Laion dataset with 768 vector dimension. I am trying to test pure Search performance without any fiters.

indexNode:
      replicas: 5
      resources:
        limits:
          cpu: "6"
          nvidia.com/gpu: "2"
          memory: 48Gi
        requests:
          cpu: "3"
          nvidia.com/gpu: "2"
          memory: 24Gi

queryNode:
      replicas: 25
      resources:
        limits:
          cpu: "6"
          nvidia.com/gpu: "2"
          memory: 48Gi
        requests:
          cpu: "3"
          nvidia.com/gpu: "2"
          memory: 24Gi


➜  VectorDBBench git:(main) ✗ gsutil du -sh gs://isds-genai-milvus-on-gpu-gcp-dev-ad55084/
365.33 GiB   gs://milvus-on-gpu-gcp-bucket

I have a total of 25 * 2 * 16 = 800 GiB of GPU memory , which should be sufficient for GPU_IVF_FLAT and IVF_FLAT , but I am getting the following failed to deserialise error :

Index Type: IndexType.GPU_IVF_FLAT
2024-11-11 23:31:33,519 | WARNING: Failed to run performance case, reason = <MilvusException: (code=2001, message=show collection failed: At LoadSegment:  => failed to Deserialize index: raft inner error at /workspace/source/internal/core/src/index/VectorMemIndex.cpp:192
)> (task_runner.py:194) (81)
Traceback (most recent call last):
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 166, in _run_perf_case
    build_dur = self._optimize()
                ^^^^^^^^^^^^^^^^
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 260, in _optimize
    raise e from None
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 252, in _optimize
    return future.result(timeout=self.ca.optimize_timeout)[1]
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.11/concurrent/futures/_base.py", line 456, in result
    return self.__get_result()
           ^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.11/concurrent/futures/_base.py", line 401, in __get_result
    raise self._exception
pymilvus.exceptions.MilvusException: <MilvusException: (code=2001, message=show collection failed: At LoadSegment:  => failed to Deserialize index: raft inner error at /workspace/source/internal/core/src/index/VectorMemIndex.cpp:192
)>
2024-11-11 23:31:33,521 | WARNING: [1/1] case {'label': <CaseLabel.Performance: 2>, 'dataset': {'data': {'name': 'LAION', 'size': 100000000, 'dim': 768, 'metric_type': <MetricType.L2: 'L2'>}}, 'db': 'Milvus'} failed to run, reason=<MilvusException: (code=2001, message=show collection failed: At LoadSegment:  => failed to Deserialize index: raft inner error at /workspace/source/internal/core/src/index/VectorMemIndex.cpp:192
)> (interface.py:184) (81)
Traceback (most recent call last):
  File "/opt/code/vectordb_bench/interface.py", line 165, in _async_task_v2
    case_res.metrics = runner.run(drop_old)
                       ^^^^^^^^^^^^^^^^^^^^
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 107, in run
    return self._run_perf_case(drop_old)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 196, in _run_perf_case
    raise e from None
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 166, in _run_perf_case
    build_dur = self._optimize()
                ^^^^^^^^^^^^^^^^
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 260, in _optimize
    raise e from None
  File "/opt/code/vectordb_bench/backend/task_runner.py", line 252, in _optimize
    return future.result(timeout=self.ca.optimize_timeout)[1]
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.11/concurrent/futures/_base.py", line 456, in result
    return self.__get_result()
           ^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.11/concurrent/futures/_base.py", line 401, in __get_result
    raise self._exception
pymilvus.exceptions.MilvusException: <MilvusException: (code=2001, message=show collection failed: At LoadSegment:  => failed to Deserialize index: raft inner error at /workspace/source/internal/core/src/index/VectorMemIndex.cpp:192
)>

Please help me understand the sizes taken up by the GPU indices and help me get over this issue.

[rohitreddy1698]

I am using the milvus-2.4.9-gpu version of the docker image.

[liliu-z]

Did you meet uneven distribution upon nodes? Try to use nvidia-smi to grab more info

[rohitreddy1698]

1. Did you meet uneven distribution upon nodes? - is this a controllable parameter.
   From my understanding Milvus tries to eliminate skewness by hosting new segments on query nodes which have more resources ?

2. Try to use nvidia-smi to grab more info - This might not be efficient because I have 25 query nodes and the nvidia-smi command gives point in time usage as per my understanding - please do correct me if I am wrong here

• I rather have dcgm exporter installed and built grafana dashboards from : https://grafana.com/grafana/dashboards/12239-nvidia-dcgm-exporter-dashboard
  Do you think these metrics will help ?