diff --git a/Makefile b/Makefile index 55b196c08..5d46136d0 100644 --- a/Makefile +++ b/Makefile @@ -130,7 +130,7 @@ analysis/enrichment/%-results-$(N).yaml: tests/input/genesets/%.yaml $(RUN) ontogpt -vv eval-enrichment -n $(N) -U $< -o $@.tmp && mv $@.tmp $@ analysis/enrichment-summary.yaml: - cat analysis/enrichment/*-$(N)yaml > $@ + cat analysis/enrichment/*-$(N).yaml > $@ analysis/enrichment-summary-$(N).yaml: cat analysis/enrichment/*-$(N).yaml > $@ diff --git a/notebooks/Enrichment-Results-Analysis.ipynb b/notebooks/Enrichment-Results-Analysis.ipynb index 24a7c8694..cdb563d56 100644 --- a/notebooks/Enrichment-Results-Analysis.ipynb +++ b/notebooks/Enrichment-Results-Analysis.ipynb @@ -24,7 +24,7 @@ }, { "cell_type": "code", - "execution_count": 97, + "execution_count": 1, "id": "3452b4b0", "metadata": { "tags": [ @@ -39,7 +39,7 @@ }, { "cell_type": "code", - "execution_count": 98, + "execution_count": 2, "id": "97e39d4a", "metadata": {}, "outputs": [], @@ -56,7 +56,7 @@ }, { "cell_type": "code", - "execution_count": 99, + "execution_count": 3, "id": "293db399", "metadata": {}, "outputs": [], @@ -69,7 +69,7 @@ }, { "cell_type": "code", - "execution_count": 147, + "execution_count": 4, "id": "9b0990c0", "metadata": {}, "outputs": [], @@ -112,7 +112,7 @@ }, { "cell_type": "code", - "execution_count": 148, + "execution_count": 5, "id": "e16189b3", "metadata": {}, "outputs": [], @@ -122,7 +122,7 @@ }, { "cell_type": "code", - "execution_count": 149, + "execution_count": 6, "id": "ca76b18a", "metadata": {}, "outputs": [], @@ -137,7 +137,7 @@ }, { "cell_type": "code", - "execution_count": 150, + "execution_count": 7, "id": "ebab4da5", "metadata": {}, "outputs": [], @@ -147,7 +147,7 @@ }, { "cell_type": "code", - "execution_count": 151, + "execution_count": 8, "id": "1eec3e01", "metadata": {}, "outputs": [ @@ -157,7 +157,7 @@ "['GO:0005773', 'GO:0005634', 'GO:0008150']" ] }, - "execution_count": 151, + "execution_count": 8, "metadata": {}, "output_type": "execute_result" } @@ -188,7 +188,7 @@ }, { "cell_type": "code", - "execution_count": 152, + "execution_count": 9, "id": "1ad7746a", "metadata": {}, "outputs": [ @@ -220,11 +220,10 @@ "
572 rows × 30 columns
\n", + "1540 rows × 30 columns
\n", "" ], "text/plain": [ - " model method geneset \\\n", - "0 gpt-3.5-turbo no_synopsis EDS-0 \n", - "1 gpt-3.5-turbo ontological_synopsis EDS-0 \n", - "2 gpt-3.5-turbo narrative_synopsis EDS-0 \n", - "3 text-davinci-003 no_synopsis EDS-0 \n", - "4 text-davinci-003 ontological_synopsis EDS-0 \n", - ".. ... ... ... \n", - "567 N/A standard tf-downreg-colorectal-1 \n", - "568 N/A standard_no_ontology tf-downreg-colorectal-1 \n", - "569 N/A random tf-downreg-colorectal-1 \n", - "570 N/A rank_based tf-downreg-colorectal-1 \n", - "571 N/A closure tf-downreg-colorectal-1 \n", - "\n", - " truncation factor source geneset gene_randomization_factor \\\n", - "0 1.0 EDS 0 \n", - "1 1.0 EDS 0 \n", - "2 1.0 EDS 0 \n", - "3 1.0 EDS 0 \n", - "4 1.0 EDS 0 \n", - ".. ... ... ... \n", - "567 1.0 tf-downreg-colorectal 1 \n", - "568 1.0 tf-downreg-colorectal 1 \n", - "569 1.0 tf-downreg-colorectal 1 \n", - "570 1.0 tf-downreg-colorectal 1 \n", - "571 1.0 tf-downreg-colorectal 1 \n", + " model method geneset \\\n", + "0 gpt-3.5-turbo no_synopsis EDS-0 \n", + "1 gpt-3.5-turbo ontological_synopsis EDS-0 \n", + "2 gpt-3.5-turbo narrative_synopsis EDS-0 \n", + "3 text-davinci-003 no_synopsis EDS-0 \n", + "4 text-davinci-003 ontological_synopsis EDS-0 \n", + "... ... ... ... \n", + "1535 N/A standard tf-downreg-colorectal-1 \n", + "1536 N/A standard_no_ontology tf-downreg-colorectal-1 \n", + "1537 N/A random tf-downreg-colorectal-1 \n", + "1538 N/A rank_based tf-downreg-colorectal-1 \n", + "1539 N/A closure tf-downreg-colorectal-1 \n", "\n", - " has top hit rank in top 5 in top 10 ... num terms num unparsed \\\n", - "0 True 5.0 False True ... 10 10 \n", - "1 True 0.0 True True ... 4 4 \n", - "2 False NaN False False ... 3 3 \n", - "3 False NaN False False ... 10 10 \n", - "4 False NaN False False ... 15 15 \n", - ".. ... ... ... ... ... ... ... \n", - "567 True 0.0 True True ... 181 181 \n", - "568 False NaN False False ... 38 38 \n", - "569 False NaN False False ... 49 49 \n", - "570 False NaN False False ... 51 51 \n", - "571 True 46.0 False False ... 3965 3965 \n", + " truncation factor source geneset gene_randomization_factor \\\n", + "0 1.0 EDS 0 \n", + "1 1.0 EDS 0 \n", + "2 1.0 EDS 0 \n", + "3 1.0 EDS 0 \n", + "4 1.0 EDS 0 \n", + "... ... ... ... \n", + "1535 1.0 tf-downreg-colorectal 1 \n", + "1536 1.0 tf-downreg-colorectal 1 \n", + "1537 1.0 tf-downreg-colorectal 1 \n", + "1538 1.0 tf-downreg-colorectal 1 \n", + "1539 1.0 tf-downreg-colorectal 1 \n", "\n", - " go term p values \\\n", - "0 [3.341122685366184e-06, 0.00026467316824618385, 1.0, 1.0, 5.591343976855226e-11, 1.0, 1.0, 1.0, 1.0] \n", - "1 [5.591343976855226e-11, 3.341122685366184e-06, 1.0, 0.013894831001982877] \n", - "2 [1.0, 3.341122685366184e-06, 1.0] \n", - "3 [1.0, 1.0, 0.00211738721495877, 0.00119121077281765, 1.0, 0.0003206219640437401, 1.0, 1.0, 1.0] \n", - "4 [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0] \n", - ".. ... \n", - "567 [4.988150254572451e-28, 5.089713278078831e-28, 6.222732503665588e-28, 2.5181292279890926e-26, 6.360582827326825e-26, 6.280681710633612e-25, 1.992067137890145e-24, 2.160407927771538e-24, 1.531197330767613e-23, 4.406686617875145e-23, 4.520132491659314e-23, 6.047956648850335e-23, 1.42513668286587e-22, 8.082830272613584e-22, 8.280409536451057e-22, 8.457494137576952e-22, 1.1587498886554318e-21, 2.0257524856083073e-21, 2.0803834350443526e-21, 3.470732713187183e-21, 1.463206966124319e-20, 2.506621557484459e-20, 3.054326526778521e-20, 4.839153573691595e-20, 5.101482454717162e-20, 7.808298808825646e-20, 8.868663592283121e-20, 9.993781841681446e-20, 1.0673363321867488e-19, 1.4998597499692998e-19, 1.4998597499692998e-19, 1.5457242764238197e-19, 1.6672250732819605e-19, 1.7114716194746733e-19, 2.406266603748282e-19, 2.4372228200848596e-19, 6.105038238036257e-19, 6.223983270815405e-19, 2.1235204181331734e-18, 2.4355875541881905e-18, 3.662762983506111e-18, 7.451648490886942e-18, 8.396417265824472e-18, 1.0890888827682343e-17, 1.8698967218267112e-17, 2.2078693923148846e-17, 2.5929122360808936e-17, 2.6263604428984028e-17, 3.3376438896625706e-17, 6.312097805142557e-17, 8.44210610764168e-17, 8.780853612258093e-17, 1.256794485435431e-16, 1.3634794047439367e-16, 1.7837718872524886e-16, 2.4682080854405927e-16, 2.528147790145545e-16, 2.84294367797696e-16, 1.3672391972253508e-15, 2.1122706998882423e-15, 2.262163598395585e-15, 2.3769365136746476e-15, 4.807871263219351e-15, 5.098145395239435e-15, 1.2816384484550604e-14, 1.313426426557983e-14, 1.863045482048372e-14, 1.9962778658494635e-14, 3.292811708352154e-14, 4.077674313669671e-14, 6.01177100081973e-14, 2.4957312733595376e-13, 2.864021009704981e-13, 2.9810617943360497e-13, 5.819244888328512e-13, 8.540048474946289e-13, 1.0377360388259339e-12, 1.1099602352756002e-12, 1.1849888758335027e-12, 1.2843592203666209e-12, 1.3338484106013712e-12, 1.3853402724665883e-12, 3.0389767852861082e-12, 7.446509980199845e-12, 9.24102116663525e-12, 1.1186070559309425e-10, 1.142136997598513e-10, 1.142136997598513e-10, 1.142136997598513e-10, 1.5338271728466858e-10, 5.707617974294617e-10, 2.1038940769888833e-09, 2.3785166500474574e-09, 4.56636746104505e-08, 4.896484580823067e-08, 7.071552977186578e-08, 1.1027883530329518e-07, 1.4803215188043313e-07, 2.0238207019879306e-07, 2.40027403455946e-07, ...] \n", - "568 [9.993781841681446e-20, 5.101482454717162e-20, 1.0890888827682343e-17, 3.0389767852861082e-12, 1.2816384484550604e-14, 1.1849888758335027e-12, 1.4998597499692998e-19, 8.082830272613584e-22, 9.24102116663525e-12, 2.5181292279890926e-26, 2.1038940769888833e-09, 1.5338271728466858e-10, 1.4803215188043313e-07, 2.2078693923148846e-17, 8.44210610764168e-17, 4.6074946792391266e-05, 7.698187260692121e-06, 1.992309673557265e-05, 2.772550857289152e-07, 1.0751034116409277e-06, 5.707617974294617e-10, 2.0257524856083073e-21, 4.406686617875145e-23, 2.9810617943360497e-13, 3.054326526778521e-20, 0.0017556171417364651, 5.819244888328512e-13, 0.013364132777108115, 0.01830361381899467, 1.0377360388259339e-12, 1.0, 1.0, 0.04072498754549389, 7.090779938263196e-05, 0.0002413697629437105, 1.0, 1.0, 1.0] \n", - "569 [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 5.101482454717162e-20, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0751034116409277e-06, 1.0, 4.406686617875145e-23, 1.0, 1.0, 1.0, 1.0, 2.5181292279890926e-26, 1.8698967218267112e-17, 1.5338271728466858e-10, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 9.24102116663525e-12, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.1849888758335027e-12, 1.0, 1.0, 1.0, 1.0] \n", - "570 [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 5.101482454717162e-20, 1.0, 1.0, 2.0257524856083073e-21, 8.082830272613584e-22, 1.0, 1.0, 1.0, 5.746621615633877e-07, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 4.406686617875145e-23, 1.0, 1.0, 2.5181292279890926e-26, 1.0, 1.5338271728466858e-10, 1.0, 1.0, 0.004817572706188025, 1.0, 1.0, 0.0065935552067459295, 1.4998597499692998e-19, 1.0, 9.993781841681446e-20, 1.0, 2.2078693923148846e-17, 1.0, 1.0, 1.0, 0.0002413697629437105, 1.0, 9.24102116663525e-12, 1.2816384484550604e-14, 1.0890888827682343e-17, 1.0, 1.0, 1.1849888758335027e-12, 1.0, 1.0] \n", - "571 [1.0, 1.0, 1.0, 1.0, 1.0, 3.839829331449604e-05, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.1027883530329518e-07, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 4.988150254572451e-28, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 2.40027403455946e-07, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, ...] \n", + " has top hit in top 5 in top 10 size overlap ... num unparsed \\\n", + "0 False False False 1 ... 3 \n", + "1 True True True 3 ... 7 \n", + "2 False False False 1 ... 6 \n", + "3 False False False 1 ... 6 \n", + "4 True True True 2 ... 8 \n", + "... ... ... ... ... ... ... \n", + "1535 True True True 183 ... 184 \n", + "1536 False False False 35 ... 39 \n", + "1537 False False False 8 ... 49 \n", + "1538 False False False 17 ... 51 \n", + "1539 True False False 183 ... 3976 \n", "\n", - " max p value min p value mean p value proportion significant \\\n", - "0 1.00 5.59e-11 6.67e-01 0.33 \n", - "1 1.00 5.59e-11 2.53e-01 0.75 \n", - "2 1.00 3.34e-06 6.67e-01 0.33 \n", - "3 1.00 3.21e-04 6.67e-01 0.33 \n", - "4 1.00 1.00e+00 1.00e+00 0.00 \n", - ".. ... ... ... ... \n", - "567 0.04 4.99e-28 4.15e-03 1.00 \n", - "568 1.00 2.52e-26 1.34e-01 0.87 \n", - "569 1.00 2.52e-26 8.37e-01 0.16 \n", - "570 1.00 2.52e-26 6.67e-01 0.33 \n", - "571 1.00 4.99e-28 9.38e-01 0.06 \n", + " go term p values max p value \\\n", + "0 [1.0, 3.341122685366184e-06] 1.000000 \n", + "1 [5.591343976855226e-11, 3.341122685366184e-06,... 1.000000 \n", + "2 [1.0, 1.0, 3.341122685366184e-06, 1.0, 1.0, 1.0] 1.000000 \n", + "3 [0.00211738721495877] 0.002117 \n", + "4 [1.0622984137290553e-07, 5.591343976855226e-11... 1.000000 \n", + "... ... ... \n", + "1535 [1.655674605612429e-26, 1.6884282099149935e-26... 0.048779 \n", + "1536 [1.0125278971177255e-19, 2.486075176022468e-17... 1.000000 \n", + "1537 [1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, ... 1.000000 \n", + "1538 [1.0, 1.0, 7.646668799811157e-25, 0.0002445456... 1.000000 \n", + "1539 [1.0, 1.0, 1.0, 0.004066057825346609, 1.0, 0.0... 1.000000 \n", "\n", - " novel \\\n", - "0 [GO:0033197, GO:0010710, GO:0032966] \n", - "1 [] \n", - "2 [] \n", - "3 [GO:0006457, GO:0098631] \n", - "4 [] \n", - ".. ... \n", - "567 [] \n", - "568 [] \n", - "569 [GO:0021549, GO:0050911, GO:0035608, GO:1904261, GO:0005789, GO:0030218, GO:0007080, GO:0043560, GO:1905370, GO:0000725, GO:0000028, GO:2000270, GO:0000049, GO:0060687, GO:0015631, GO:1902774] \n", - "570 [GO:0005789, GO:0004930, GO:0005509, GO:0000139, GO:0007186] \n", - "571 [] \n", + " min p value mean p value proportion significant \\\n", + "0 3.341123e-06 0.500002 0.500000 \n", + "1 5.591344e-11 0.571454 0.428571 \n", + "2 3.341123e-06 0.833334 0.166667 \n", + "3 2.117387e-03 0.002117 1.000000 \n", + "4 5.591344e-11 0.333333 0.666667 \n", + "... ... ... ... \n", + "1535 1.655675e-26 0.003470 1.000000 \n", + "1536 7.646669e-25 0.104709 0.897436 \n", + "1537 1.012528e-19 0.836773 0.163265 \n", + "1538 7.646669e-25 0.667541 0.333333 \n", + "1539 1.655675e-26 0.937488 0.062723 \n", "\n", - " novel labels \\\n", - "0 [response to vitamin E, regulation of collagen catabolic process, negative regulation of collagen biosynthetic process] \n", - "1 [] \n", - "2 [] \n", - "3 [protein folding, cell adhesion mediator activity] \n", - "4 [] \n", - ".. ... \n", - "567 [] \n", - "568 [] \n", - "569 [cerebellum development, detection of chemical stimulus involved in sensory perception of smell, protein deglutamylation, positive regulation of basement membrane assembly involved in embryonic body morphogenesis, endoplasmic reticulum membrane, erythrocyte differentiation, mitotic metaphase plate congression, insulin receptor substrate binding, serine-type endopeptidase complex, recombinational repair, ribosomal small subunit assembly, negative regulation of fibroblast apoptotic process, tRNA binding, regulation of branching involved in prostate gland morphogenesis, tubulin binding, late endosome to lysosome transport] \n", - "570 [endoplasmic reticulum membrane, G protein-coupled receptor activity, calcium ion binding, Golgi membrane, G protein-coupled receptor signaling pathway] \n", - "571 [] \n", + " novel \\\n", + "0 [] \n", + "1 [GO:0016570] \n", + "2 [GO:0006457] \n", + "3 [] \n", + "4 [] \n", + "... ... \n", + "1535 [] \n", + "1536 [] \n", + "1537 [GO:0048289, GO:0000137, GO:0030289, GO:000863... \n", + "1538 [GO:0005789, GO:0004930, GO:0005509] \n", + "1539 [] \n", "\n", - " num novel \n", - "0 3 \n", - "1 0 \n", - "2 0 \n", - "3 2 \n", - "4 0 \n", - ".. ... \n", - "567 0 \n", - "568 0 \n", - "569 16 \n", - "570 5 \n", - "571 0 \n", + " novel labels num novel rank \n", + "0 [] 0 NaN \n", + "1 [histone modification] 1 0.0 \n", + "2 [protein folding] 1 NaN \n", + "3 [] 0 NaN \n", + "4 [] 0 3.0 \n", + "... ... ... ... \n", + "1535 [] 0 0.0 \n", + "1536 [] 0 NaN \n", + "1537 [isotype switching to IgE isotypes, Golgi cis ... 23 NaN \n", + "1538 [endoplasmic reticulum membrane, G protein-cou... 3 NaN \n", + "1539 [] 0 20.0 \n", "\n", - "[572 rows x 30 columns]" + "[1540 rows x 30 columns]" ] }, - "execution_count": 152, + "execution_count": 9, "metadata": {}, "output_type": "execute_result" } @@ -731,7 +718,7 @@ }, { "cell_type": "code", - "execution_count": 153, + "execution_count": 10, "id": "b377198f", "metadata": {}, "outputs": [ @@ -787,9 +774,9 @@ "11 rows × 2 columns
\n", "" ], "text/plain": [ @@ -828,17 +814,15 @@ "2 gpt-3.5-turbo narrative_synopsis\n", "3 text-davinci-003 no_synopsis\n", "4 text-davinci-003 ontological_synopsis\n", - ".. ... ...\n", + "5 text-davinci-003 narrative_synopsis\n", "6 N/A standard\n", "7 N/A standard_no_ontology\n", "8 N/A random\n", "9 N/A rank_based\n", - "10 N/A closure\n", - "\n", - "[11 rows x 2 columns]" + "10 N/A closure" ] }, - "execution_count": 153, + "execution_count": 10, "metadata": {}, "output_type": "execute_result" } @@ -849,7 +833,7 @@ }, { "cell_type": "code", - "execution_count": 154, + "execution_count": 11, "id": "c7263499", "metadata": {}, "outputs": [ @@ -888,63 +872,63 @@ " \n", "26 rows × 1 columns
\n", + "70 rows × 1 columns
\n", "" ], "text/plain": [ - " source geneset\n", - "0 EDS\n", - "22 FA\n", - "44 HALLMARK_APICAL_JUNCTION\n", - "66 HALLMARK_GLYCOLYSIS\n", - "88 HALLMARK_HEDGEHOG_SIGNALING\n", - ".. ...\n", - "462 peroxisome\n", - "484 progeria\n", - "506 regulation of presynaptic membrane potential\n", - "528 sensory ataxia\n", - "550 tf-downreg-colorectal\n", + " source geneset\n", + "0 EDS\n", + "22 FA\n", + "44 HALLMARK_ADIPOGENESIS\n", + "66 HALLMARK_ALLOGRAFT_REJECTION\n", + "88 HALLMARK_ANDROGEN_RESPONSE\n", + "... ...\n", + "1430 peroxisome\n", + "1452 progeria\n", + "1474 regulation of presynaptic membrane potential\n", + "1496 sensory ataxia\n", + "1518 tf-downreg-colorectal\n", "\n", - "[26 rows x 1 columns]" + "[70 rows x 1 columns]" ] }, - "execution_count": 154, + "execution_count": 11, "metadata": {}, "output_type": "execute_result" } @@ -955,7 +939,7 @@ }, { "cell_type": "code", - "execution_count": 155, + "execution_count": 12, "id": "30174f04", "metadata": {}, "outputs": [ @@ -963,7 +947,7 @@ "name": "stderr", "output_type": "stream", "text": [ - "/var/folders/nc/m4tx21912kv1b8nk3zzx9plr0000gn/T/ipykernel_82942/3852654709.py:1: FutureWarning: this method is deprecated in favour of `Styler.hide(axis=\"index\")`\n", + "/var/folders/nc/m4tx21912kv1b8nk3zzx9plr0000gn/T/ipykernel_82661/3852654709.py:1: FutureWarning: this method is deprecated in favour of `Styler.hide(axis=\"index\")`\n", " df[[SOURCE_GENESET, GENESET_SIZE]].drop_duplicates().style.hide_index()\n" ] }, @@ -972,126 +956,302 @@ "text/html": [ "\n", - "source geneset | \n", - "geneset_size | \n", + "source geneset | \n", + "geneset_size | \n", "
---|---|---|---|
EDS | \n", - "19 | \n", + "EDS | \n", + "19 | \n", + "
FA | \n", + "19 | \n", + "||
HALLMARK_ADIPOGENESIS | \n", + "200 | \n", + "||
HALLMARK_ALLOGRAFT_REJECTION | \n", + "200 | \n", + "||
HALLMARK_ANDROGEN_RESPONSE | \n", + "101 | \n", + "||
HALLMARK_ANGIOGENESIS | \n", + "36 | \n", + "||
HALLMARK_APICAL_JUNCTION | \n", + "200 | \n", + "||
HALLMARK_APICAL_SURFACE | \n", + "44 | \n", + "||
HALLMARK_APOPTOSIS | \n", + "161 | \n", + "||
HALLMARK_BILE_ACID_METABOLISM | \n", + "112 | \n", + "||
HALLMARK_CHOLESTEROL_HOMEOSTASIS | \n", + "74 | \n", + "||
HALLMARK_COAGULATION | \n", + "138 | \n", + "||
HALLMARK_COMPLEMENT | \n", + "200 | \n", "||
FA | \n", - "19 | \n", + "HALLMARK_DNA_REPAIR | \n", + "150 | \n", "
HALLMARK_APICAL_JUNCTION | \n", - "200 | \n", + "HALLMARK_E2F_TARGETS | \n", + "200 | \n", "
HALLMARK_GLYCOLYSIS | \n", - "200 | \n", + "HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION | \n", + "200 | \n", "
HALLMARK_HEDGEHOG_SIGNALING | \n", - "36 | \n", + "HALLMARK_ESTROGEN_RESPONSE_EARLY | \n", + "200 | \n", "
HALLMARK_INTERFERON_GAMMA_RESPONSE | \n", - "200 | \n", + "HALLMARK_ESTROGEN_RESPONSE_LATE | \n", + "200 | \n", "
HALLMARK_MTORC1_SIGNALING | \n", - "200 | \n", + "HALLMARK_FATTY_ACID_METABOLISM | \n", + "158 | \n", "
T cell proliferation | \n", - "72 | \n", + "HALLMARK_G2M_CHECKPOINT | \n", + "200 | \n", "
Yamanaka-TFs | \n", - "4 | \n", + "HALLMARK_GLYCOLYSIS | \n", + "200 | \n", "
amigo-example | \n", - "36 | \n", + "HALLMARK_HEDGEHOG_SIGNALING | \n", + "36 | \n", "
bicluster_RNAseqDB_0 | \n", - "158 | \n", + "HALLMARK_HEME_METABOLISM | \n", + "200 | \n", "
bicluster_RNAseqDB_1002 | \n", - "52 | \n", + "HALLMARK_HYPOXIA | \n", + "200 | \n", "
term-GO:0007212 | \n", - "28 | \n", + "HALLMARK_IL2_STAT5_SIGNALING | \n", + "199 | \n", "
endocytosis | \n", - "16 | \n", + "HALLMARK_IL6_JAK_STAT3_SIGNALING | \n", + "87 | \n", "
go-postsynapse-calcium-transmembrane | \n", - "33 | \n", + "HALLMARK_INFLAMMATORY_RESPONSE | \n", + "200 | \n", "
go-reg-autophagy-pkra | \n", - "17 | \n", + "HALLMARK_INTERFERON_ALPHA_RESPONSE | \n", + "97 | \n", "
hydrolase activity, hydrolyzing O-glycosyl compounds | \n", - "91 | \n", + "HALLMARK_INTERFERON_GAMMA_RESPONSE | \n", + "200 | \n", "
ig-receptor-binding-2022 | \n", - "91 | \n", + "HALLMARK_KRAS_SIGNALING_DN | \n", + "200 | \n", "
meiosis I | \n", - "54 | \n", + "HALLMARK_KRAS_SIGNALING_UP | \n", + "200 | \n", "
molecular sequestering | \n", - "30 | \n", + "HALLMARK_MITOTIC_SPINDLE | \n", + "199 | \n", "
mtorc1 | \n", - "200 | \n", + "HALLMARK_MTORC1_SIGNALING | \n", + "200 | \n", "
peroxisome | \n", - "8 | \n", + "HALLMARK_MYC_TARGETS_V1 | \n", + "200 | \n", "
progeria | \n", - "4 | \n", + "HALLMARK_MYC_TARGETS_V2 | \n", + "58 | \n", "
regulation of presynaptic membrane potential | \n", - "30 | \n", + "HALLMARK_MYOGENESIS | \n", + "200 | \n", "
sensory ataxia | \n", - "15 | \n", + "HALLMARK_NOTCH_SIGNALING | \n", + "32 | \n", "
tf-downreg-colorectal | \n", - "51 | \n", + "HALLMARK_P53_PATHWAY | \n", + "200 | \n", + "
HALLMARK_PANCREAS_BETA_CELLS | \n", + "40 | \n", + "||
HALLMARK_PEROXISOME | \n", + "104 | \n", + "||
HALLMARK_PI3K_AKT_MTOR_SIGNALING | \n", + "105 | \n", + "||
HALLMARK_PROTEIN_SECRETION | \n", + "96 | \n", + "||
HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY | \n", + "49 | \n", + "||
HALLMARK_SPERMATOGENESIS | \n", + "135 | \n", + "||
HALLMARK_TGF_BETA_SIGNALING | \n", + "54 | \n", + "||
HALLMARK_TNFA_SIGNALING_VIA_NFKB | \n", + "200 | \n", + "||
HALLMARK_UNFOLDED_PROTEIN_RESPONSE | \n", + "113 | \n", + "||
HALLMARK_UV_RESPONSE_DN | \n", + "144 | \n", + "||
HALLMARK_UV_RESPONSE_UP | \n", + "158 | \n", + "||
HALLMARK_WNT_BETA_CATENIN_SIGNALING | \n", + "42 | \n", + "||
T cell proliferation | \n", + "72 | \n", + "||
Yamanaka-TFs | \n", + "4 | \n", + "||
amigo-example | \n", + "36 | \n", + "||
bicluster_RNAseqDB_0 | \n", + "158 | \n", + "||
bicluster_RNAseqDB_1002 | \n", + "52 | \n", + "||
glycolysis-gocam | \n", + "10 | \n", + "||
term-GO:0007212 | \n", + "28 | \n", + "||
endocytosis | \n", + "16 | \n", + "||
go-postsynapse-calcium-transmembrane | \n", + "33 | \n", + "||
go-reg-autophagy-pkra | \n", + "17 | \n", + "||
hydrolase activity, hydrolyzing O-glycosyl compounds | \n", + "91 | \n", + "||
ig-receptor-binding-2022 | \n", + "91 | \n", + "||
meiosis I | \n", + "54 | \n", + "||
molecular sequestering | \n", + "30 | \n", + "||
mtorc1 | \n", + "200 | \n", + "||
peroxisome | \n", + "8 | \n", + "||
progeria | \n", + "4 | \n", + "||
regulation of presynaptic membrane potential | \n", + "30 | \n", + "||
sensory ataxia | \n", + "15 | \n", + "||
tf-downreg-colorectal | \n", + "51 | \n", "
model | \n", - "method | \n", + "model | \n", + "method | \n", "
---|---|---|---|
gpt-3.5-turbo | \n", - "no_synopsis | \n", + "gpt-3.5-turbo | \n", + "no_synopsis | \n", "
gpt-3.5-turbo | \n", - "ontological_synopsis | \n", + "gpt-3.5-turbo | \n", + "ontological_synopsis | \n", "
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", "
text-davinci-003 | \n", - "no_synopsis | \n", + "text-davinci-003 | \n", + "no_synopsis | \n", "
text-davinci-003 | \n", - "ontological_synopsis | \n", + "text-davinci-003 | \n", + "ontological_synopsis | \n", "
text-davinci-003 | \n", - "narrative_synopsis | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", "
N/A | \n", - "standard | \n", + "N/A | \n", + "standard | \n", "
N/A | \n", - "standard_no_ontology | \n", + "N/A | \n", + "standard_no_ontology | \n", "
N/A | \n", - "random | \n", + "N/A | \n", + "random | \n", "
N/A | \n", - "rank_based | \n", + "N/A | \n", + "rank_based | \n", "
N/A | \n", - "closure | \n", + "N/A | \n", + "closure | \n", "
193074 rows × 36 columns
\n", + "775719 rows × 36 columns
\n", "" ], "text/plain": [ - " model method term \\\n", - "0 gpt-3.5-turbo no_synopsis GO:0030198 \n", - "1 gpt-3.5-turbo no_synopsis GO:0032963 \n", - "2 gpt-3.5-turbo no_synopsis GO:0033197 \n", - "3 gpt-3.5-turbo no_synopsis GO:0010710 \n", - "4 gpt-3.5-turbo no_synopsis GO:0030199 \n", - "... ... ... ... \n", - "193069 N/A closure GO:0032106 \n", - "193070 N/A closure GO:0032109 \n", - "193071 N/A closure GO:0045848 \n", - "193072 N/A closure GO:2001248 \n", - "193073 N/A closure GO:2001250 \n", + " model method term \\\n", + "0 gpt-3.5-turbo no_synopsis GO:0032964 \n", + "1 gpt-3.5-turbo no_synopsis GO:0030198 \n", + "2 gpt-3.5-turbo ontological_synopsis GO:0030199 \n", + "3 gpt-3.5-turbo ontological_synopsis GO:0030198 \n", + "4 gpt-3.5-turbo ontological_synopsis GO:0061448 \n", + "... ... ... ... \n", + "775714 N/A closure GO:1903580 \n", + "775715 N/A closure GO:2001169 \n", + "775716 N/A closure GO:2001171 \n", + "775717 N/A closure GO:2001198 \n", + "775718 N/A closure GO:2001200 \n", "\n", - " label \\\n", - "0 extracellular matrix organization \n", - "1 collagen metabolic process \n", - "2 response to vitamin E \n", - "3 regulation of collagen catabolic process \n", - "4 collagen fibril organization \n", - "... ... \n", - "193069 positive regulation of response to extracellular stimulus \n", - "193070 positive regulation of response to nutrient levels \n", - "193071 positive regulation of nitrogen utilization \n", - "193072 regulation of ammonia assimilation cycle \n", - "193073 positive regulation of ammonia assimilation cycle \n", + " label goslim_chembl \\\n", + "0 collagen biosynthetic process NaN \n", + "1 extracellular matrix organization 1.0 \n", + "2 collagen fibril organization NaN \n", + "3 extracellular matrix organization 1.0 \n", + "4 connective tissue development NaN \n", + "... ... ... \n", + "775714 positive regulation of ATP metabolic process NaN \n", + "775715 regulation of ATP biosynthetic process NaN \n", + "775716 positive regulation of ATP biosynthetic process NaN \n", + "775717 regulation of dendritic cell differentiation NaN \n", + "775718 positive regulation of dendritic cell differen... NaN \n", "\n", - " goslim_chembl goslim_generic goslim_drosophila \\\n", - "0 1.0 1.0 1.0 \n", - "1 NaN NaN NaN \n", - "2 NaN NaN NaN \n", - "3 NaN NaN NaN \n", - "4 NaN NaN NaN \n", - "... ... ... ... \n", - "193069 NaN NaN NaN \n", - "193070 NaN NaN NaN \n", - "193071 NaN NaN NaN \n", - "193072 NaN NaN NaN \n", - "193073 NaN NaN NaN \n", + " goslim_generic goslim_drosophila goslim_yeast goslim_pir \\\n", + "0 NaN NaN NaN NaN \n", + "1 1.0 1.0 NaN NaN \n", + "2 NaN NaN NaN NaN \n", + "3 1.0 1.0 NaN NaN \n", + "4 NaN NaN NaN NaN \n", + "... ... ... ... ... \n", + "775714 NaN NaN NaN NaN \n", + "775715 NaN NaN NaN NaN \n", + "775716 NaN NaN NaN NaN \n", + "775717 NaN NaN NaN NaN \n", + "775718 NaN NaN NaN NaN \n", "\n", - " anc_of_goslim_synapse goslim_pir goslim_metagenomics ... \\\n", - "0 NaN NaN NaN ... \n", - "1 NaN NaN NaN ... \n", - "2 NaN NaN NaN ... \n", - "3 NaN NaN NaN ... \n", - "4 NaN NaN NaN ... \n", - "... ... ... ... ... \n", - "193069 NaN NaN NaN ... \n", - "193070 NaN NaN NaN ... \n", - "193071 NaN NaN NaN ... \n", - "193072 NaN NaN NaN ... \n", - "193073 NaN NaN NaN ... \n", + " goslim_metagenomics ... anc_of_goslim_flybase_ribbon \\\n", + "0 NaN ... NaN \n", + "1 NaN ... NaN \n", + "2 NaN ... NaN \n", + "3 NaN ... NaN \n", + "4 NaN ... NaN \n", + "... ... ... ... \n", + "775714 NaN ... NaN \n", + "775715 NaN ... NaN \n", + "775716 NaN ... NaN \n", + "775717 NaN ... NaN \n", + "775718 NaN ... NaN \n", "\n", - " goslim_flybase_ribbon anc_of_goslim_flybase_ribbon \\\n", - "0 NaN NaN \n", - "1 NaN NaN \n", - "2 NaN NaN \n", - "3 NaN NaN \n", - "4 NaN NaN \n", - "... ... ... \n", - "193069 NaN NaN \n", - "193070 NaN NaN \n", - "193071 NaN NaN \n", - "193072 NaN NaN \n", - "193073 NaN NaN \n", - "\n", - " anc_of_goslim_agr anc_of_goslim_pombe \\\n", - "0 NaN NaN \n", - "1 NaN NaN \n", - "2 NaN NaN \n", - "3 NaN NaN \n", - "4 NaN NaN \n", - "... ... ... \n", - "193069 NaN NaN \n", - "193070 NaN NaN \n", - "193071 NaN NaN \n", - "193072 NaN NaN \n", - "193073 NaN NaN \n", + " anc_of_goslim_agr goslim_mouse anc_of_goslim_pombe \\\n", + "0 NaN NaN NaN \n", + "1 NaN NaN NaN \n", + "2 NaN NaN NaN \n", + "3 NaN NaN NaN \n", + "4 NaN NaN NaN \n", + "... ... ... ... \n", + "775714 NaN NaN NaN \n", + "775715 NaN NaN NaN \n", + "775716 NaN NaN NaN \n", + "775717 NaN NaN NaN \n", + "775718 NaN NaN NaN \n", "\n", " anc_of_gocheck_do_not_manually_annotate anc_of_goslim_mouse \\\n", "0 NaN NaN \n", @@ -1630,11 +1777,11 @@ "3 NaN NaN \n", "4 NaN NaN \n", "... ... ... \n", - "193069 NaN NaN \n", - "193070 NaN NaN \n", - "193071 NaN NaN \n", - "193072 NaN NaN \n", - "193073 NaN NaN \n", + "775714 NaN NaN \n", + "775715 NaN NaN \n", + "775716 NaN NaN \n", + "775717 NaN NaN \n", + "775718 NaN NaN \n", "\n", " anc_of_goslim_plant gocheck_do_not_annotate \\\n", "0 NaN NaN \n", @@ -1643,11 +1790,11 @@ "3 NaN NaN \n", "4 NaN NaN \n", "... ... ... \n", - "193069 NaN NaN \n", - "193070 NaN NaN \n", - "193071 NaN NaN \n", - "193072 NaN NaN \n", - "193073 NaN NaN \n", + "775714 NaN NaN \n", + "775715 NaN NaN \n", + "775716 NaN NaN \n", + "775717 NaN NaN \n", + "775718 NaN NaN \n", "\n", " gocheck_do_not_manually_annotate goslim_synapse \n", "0 NaN NaN \n", @@ -1656,16 +1803,16 @@ "3 NaN NaN \n", "4 NaN NaN \n", "... ... ... \n", - "193069 NaN NaN \n", - "193070 NaN NaN \n", - "193071 NaN NaN \n", - "193072 NaN NaN \n", - "193073 NaN NaN \n", + "775714 NaN NaN \n", + "775715 NaN NaN \n", + "775716 NaN NaN \n", + "775717 NaN NaN \n", + "775718 NaN NaN \n", "\n", - "[193074 rows x 36 columns]" + "[775719 rows x 36 columns]" ] }, - "execution_count": 158, + "execution_count": 15, "metadata": {}, "output_type": "execute_result" } @@ -1686,7 +1833,7 @@ }, { "cell_type": "code", - "execution_count": 159, + "execution_count": 16, "id": "9745fa79", "metadata": {}, "outputs": [ @@ -1694,47 +1841,47 @@ "data": { "text/html": [ "\n", - "\n", " | \n", - " | goslim_chembl | \n", - "goslim_generic | \n", - "goslim_drosophila | \n", - "anc_of_goslim_synapse | \n", - "goslim_pir | \n", - "goslim_metagenomics | \n", - "goslim_pombe | \n", - "goslim_candida | \n", - "prokaryote_subset | \n", - "goslim_yeast | \n", - "anc_of_goslim_pir | \n", - "goslim_plant | \n", - "goslim_agr | \n", - "goslim_mouse | \n", - "anc_of_gocheck_do_not_annotate | \n", - "anc_of_goslim_chembl | \n", - "anc_of_goslim_generic | \n", - "anc_of_goslim_drosophila | \n", - "anc_of_goslim_candida | \n", - "anc_of_goslim_metagenomics | \n", - "anc_of_goslim_yeast | \n", - "anc_of_prokaryote_subset | \n", - "goslim_flybase_ribbon | \n", - "anc_of_goslim_flybase_ribbon | \n", - "anc_of_goslim_agr | \n", - "anc_of_goslim_pombe | \n", - "anc_of_gocheck_do_not_manually_annotate | \n", - "anc_of_goslim_mouse | \n", - "anc_of_goslim_plant | \n", - "gocheck_do_not_annotate | \n", - "gocheck_do_not_manually_annotate | \n", - "goslim_synapse | \n", + "goslim_chembl | \n", + "goslim_generic | \n", + "goslim_drosophila | \n", + "goslim_yeast | \n", + "goslim_pir | \n", + "goslim_metagenomics | \n", + "goslim_pombe | \n", + "goslim_candida | \n", + "prokaryote_subset | \n", + "anc_of_goslim_synapse | \n", + "anc_of_goslim_yeast | \n", + "anc_of_goslim_pir | \n", + "anc_of_goslim_chembl | \n", + "anc_of_goslim_generic | \n", + "anc_of_goslim_drosophila | \n", + "anc_of_goslim_candida | \n", + "goslim_plant | \n", + "anc_of_goslim_metagenomics | \n", + "anc_of_gocheck_do_not_annotate | \n", + "anc_of_prokaryote_subset | \n", + "goslim_flybase_ribbon | \n", + "goslim_agr | \n", + "anc_of_goslim_flybase_ribbon | \n", + "anc_of_goslim_agr | \n", + "goslim_mouse | \n", + "anc_of_goslim_pombe | \n", + "anc_of_gocheck_do_not_manually_annotate | \n", + "anc_of_goslim_mouse | \n", + "anc_of_goslim_plant | \n", + "gocheck_do_not_annotate | \n", + "gocheck_do_not_manually_annotate | \n", + "goslim_synapse | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -1775,401 +1922,401 @@ "||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
N/A | \n", - "closure | \n", - "0.056 | \n", - "0.031 | \n", - "0.039 | \n", - "0.114 | \n", - "0.058 | \n", - "0.021 | \n", - "0.010 | \n", - "0.022 | \n", - "0.020 | \n", - "0.033 | \n", - "0.091 | \n", - "0.028 | \n", - "0.019 | \n", - "0.016 | \n", - "0.053 | \n", - "0.067 | \n", - "0.058 | \n", - "0.068 | \n", - "0.039 | \n", - "0.044 | \n", - "0.064 | \n", - "0.041 | \n", - "0.016 | \n", - "0.017 | \n", - "0.027 | \n", - "0.048 | \n", - "0.041 | \n", - "0.028 | \n", - "0.034 | \n", - "0.010 | \n", - "0.010 | \n", - "0.013 | \n", - "|||||||||||||||||||||||||||||||||
random | \n", - "0.171 | \n", - "0.107 | \n", - "0.120 | \n", - "0.170 | \n", - "0.114 | \n", - "0.071 | \n", - "0.017 | \n", - "0.090 | \n", - "0.062 | \n", - "0.109 | \n", - "0.113 | \n", - "0.106 | \n", - "0.073 | \n", - "0.065 | \n", - "0.087 | \n", - "0.045 | \n", - "0.058 | \n", - "0.069 | \n", - "0.027 | \n", - "0.046 | \n", - "0.053 | \n", - "0.034 | \n", - "0.061 | \n", - "0.029 | \n", - "0.041 | \n", - "0.087 | \n", - "0.071 | \n", - "0.043 | \n", - "0.024 | \n", - "0.001 | \n", - "0.002 | \n", - "0.014 | \n", - "||||||||||||||||||||||||||||||||||
rank_based | \n", - "0.371 | \n", - "0.216 | \n", - "0.246 | \n", - "0.341 | \n", - "0.236 | \n", - "0.146 | \n", - "0.025 | \n", - "0.202 | \n", - "0.119 | \n", - "0.229 | \n", - "0.223 | \n", - "0.242 | \n", - "0.180 | \n", - "0.153 | \n", - "0.181 | \n", - "0.101 | \n", - "0.134 | \n", - "0.168 | \n", - "0.067 | \n", - "0.096 | \n", - "0.109 | \n", - "0.080 | \n", - "0.138 | \n", - "0.057 | \n", - "0.091 | \n", - "0.164 | \n", - "0.148 | \n", - "0.094 | \n", - "0.064 | \n", - "0.000 | \n", - "0.003 | \n", - "0.019 | \n", - "||||||||||||||||||||||||||||||||||
standard | \n", - "0.083 | \n", - "0.049 | \n", - "0.059 | \n", - "0.252 | \n", - "0.098 | \n", - "0.044 | \n", - "0.015 | \n", - "0.038 | \n", - "0.038 | \n", - "0.044 | \n", - "0.166 | \n", - "0.059 | \n", - "0.042 | \n", - "0.034 | \n", - "0.111 | \n", - "0.154 | \n", - "0.139 | \n", - "0.158 | \n", - "0.090 | \n", - "0.099 | \n", - "0.131 | \n", - "0.100 | \n", - "0.037 | \n", - "0.045 | \n", - "0.074 | \n", - "0.102 | \n", - "0.114 | \n", - "0.079 | \n", - "0.080 | \n", - "0.033 | \n", - "0.035 | \n", - "0.020 | \n", - "||||||||||||||||||||||||||||||||||
standard_no_ontology | \n", - "0.082 | \n", - "0.056 | \n", - "0.062 | \n", - "0.113 | \n", - "0.057 | \n", - "0.031 | \n", - "0.013 | \n", - "0.033 | \n", - "0.036 | \n", - "0.045 | \n", - "0.057 | \n", - "0.040 | \n", - "0.036 | \n", - "0.028 | \n", - "0.040 | \n", - "0.023 | \n", - "0.024 | \n", - "0.030 | \n", - "0.010 | \n", - "0.029 | \n", - "0.020 | \n", - "0.014 | \n", - "0.027 | \n", - "0.008 | \n", - "0.014 | \n", - "0.029 | \n", - "0.019 | \n", - "0.016 | \n", - "0.010 | \n", - "0.001 | \n", - "0.001 | \n", - "0.040 | \n", - "||||||||||||||||||||||||||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.250 | \n", - "0.209 | \n", - "0.214 | \n", - "0.306 | \n", - "0.184 | \n", - "0.117 | \n", - "0.092 | \n", - "0.148 | \n", - "0.158 | \n", - "0.148 | \n", - "0.168 | \n", - "0.133 | \n", - "0.071 | \n", - "0.056 | \n", - "0.173 | \n", - "0.077 | \n", - "0.122 | \n", - "0.138 | \n", - "0.051 | \n", - "0.066 | \n", - "0.112 | \n", - "0.097 | \n", - "0.046 | \n", - "0.036 | \n", - "0.066 | \n", - "0.107 | \n", - "0.077 | \n", - "0.071 | \n", - "0.020 | \n", - "0.010 | \n", - "0.026 | \n", - "0.020 | \n", - "|||||||||||||||||||||||||||||||||
no_synopsis | \n", - "0.167 | \n", - "0.160 | \n", - "0.203 | \n", - "0.227 | \n", - "0.170 | \n", - "0.090 | \n", - "0.087 | \n", - "0.103 | \n", - "0.110 | \n", - "0.147 | \n", - "0.160 | \n", - "0.067 | \n", - "0.030 | \n", - "0.017 | \n", - "0.123 | \n", - "0.070 | \n", - "0.103 | \n", - "0.093 | \n", - "0.043 | \n", - "0.087 | \n", - "0.090 | \n", - "0.090 | \n", - "0.013 | \n", - "0.007 | \n", - "0.063 | \n", - "0.073 | \n", - "0.050 | \n", - "0.067 | \n", - "0.053 | \n", - "0.027 | \n", - "0.010 | \n", - "0.017 | \n", - "||||||||||||||||||||||||||||||||||
ontological_synopsis | \n", - "0.212 | \n", - "0.168 | \n", - "0.216 | \n", - "0.224 | \n", - "0.156 | \n", - "0.104 | \n", - "0.076 | \n", - "0.136 | \n", - "0.124 | \n", - "0.156 | \n", - "0.144 | \n", - "0.112 | \n", - "0.068 | \n", - "0.060 | \n", - "0.112 | \n", - "0.056 | \n", - "0.072 | \n", - "0.080 | \n", - "0.040 | \n", - "0.076 | \n", - "0.080 | \n", - "0.056 | \n", - "0.044 | \n", - "0.032 | \n", - "0.052 | \n", - "0.032 | \n", - "0.044 | \n", - "0.056 | \n", - "0.028 | \n", - "0.008 | \n", - "0.008 | \n", - "0.016 | \n", - "||||||||||||||||||||||||||||||||||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.357 | \n", - "0.256 | \n", - "0.343 | \n", - "0.280 | \n", - "0.295 | \n", - "0.208 | \n", - "0.155 | \n", - "0.246 | \n", - "0.246 | \n", - "0.232 | \n", - "0.246 | \n", - "0.222 | \n", - "0.111 | \n", - "0.101 | \n", - "0.203 | \n", - "0.092 | \n", - "0.150 | \n", - "0.140 | \n", - "0.092 | \n", - "0.135 | \n", - "0.193 | \n", - "0.116 | \n", - "0.072 | \n", - "0.048 | \n", - "0.116 | \n", - "0.092 | \n", - "0.092 | \n", - "0.116 | \n", - "0.053 | \n", - "0.034 | \n", - "0.005 | \n", - "0.005 | \n", - "|||||||||||||||||||||||||||||||||
no_synopsis | \n", - "0.346 | \n", - "0.241 | \n", - "0.321 | \n", - "0.321 | \n", - "0.308 | \n", - "0.207 | \n", - "0.169 | \n", - "0.249 | \n", - "0.219 | \n", - "0.253 | \n", - "0.278 | \n", - "0.232 | \n", - "0.127 | \n", - "0.093 | \n", - "0.253 | \n", - "0.118 | \n", - "0.207 | \n", - "0.219 | \n", - "0.101 | \n", - "0.131 | \n", - "0.181 | \n", - "0.152 | \n", - "0.072 | \n", - "0.030 | \n", - "0.105 | \n", - "0.165 | \n", - "0.114 | \n", - "0.110 | \n", - "0.068 | \n", - "0.030 | \n", - "0.030 | \n", - "0.017 | \n", - "||||||||||||||||||||||||||||||||||
ontological_synopsis | \n", - "0.229 | \n", - "0.119 | \n", - "0.167 | \n", - "0.246 | \n", - "0.142 | \n", - "0.102 | \n", - "0.051 | \n", - "0.110 | \n", - "0.099 | \n", - "0.130 | \n", - "0.190 | \n", - "0.113 | \n", - "0.068 | \n", - "0.051 | \n", - "0.133 | \n", - "0.085 | \n", - "0.122 | \n", - "0.113 | \n", - "0.076 | \n", - "0.079 | \n", - "0.099 | \n", - "0.116 | \n", - "0.054 | \n", - "0.034 | \n", - "0.088 | \n", - "0.054 | \n", - "0.071 | \n", - "0.093 | \n", - "0.051 | \n", - "0.006 | \n", - "0.011 | \n", - "0.003 | \n", + "N/A | \n", + "closure | \n", + "0.049 | \n", + "0.027 | \n", + "0.034 | \n", + "0.029 | \n", + "0.050 | \n", + "0.018 | \n", + "0.009 | \n", + "0.017 | \n", + "0.017 | \n", + "0.093 | \n", + "0.050 | \n", + "0.078 | \n", + "0.054 | \n", + "0.045 | \n", + "0.053 | \n", + "0.030 | \n", + "0.022 | \n", + "0.035 | \n", + "0.042 | \n", + "0.032 | \n", + "0.012 | \n", + "0.015 | \n", + "0.012 | \n", + "0.019 | \n", + "0.012 | \n", + "0.037 | \n", + "0.031 | \n", + "0.020 | \n", + "0.026 | \n", + "0.008 | \n", + "0.007 | \n", + "0.012 | \n", + "
random | \n", + "0.165 | \n", + "0.100 | \n", + "0.109 | \n", + "0.106 | \n", + "0.108 | \n", + "0.066 | \n", + "0.014 | \n", + "0.084 | \n", + "0.056 | \n", + "0.161 | \n", + "0.052 | \n", + "0.106 | \n", + "0.046 | \n", + "0.058 | \n", + "0.069 | \n", + "0.028 | \n", + "0.102 | \n", + "0.040 | \n", + "0.086 | \n", + "0.034 | \n", + "0.060 | \n", + "0.075 | \n", + "0.025 | \n", + "0.037 | \n", + "0.066 | \n", + "0.077 | \n", + "0.066 | \n", + "0.038 | \n", + "0.027 | \n", + "0.001 | \n", + "0.001 | \n", + "0.017 | \n", + "||||||||||||||||||||||||||||||||||
rank_based | \n", + "0.334 | \n", + "0.183 | \n", + "0.220 | \n", + "0.202 | \n", + "0.221 | \n", + "0.120 | \n", + "0.026 | \n", + "0.164 | \n", + "0.102 | \n", + "0.314 | \n", + "0.112 | \n", + "0.207 | \n", + "0.107 | \n", + "0.129 | \n", + "0.161 | \n", + "0.071 | \n", + "0.199 | \n", + "0.096 | \n", + "0.161 | \n", + "0.081 | \n", + "0.111 | \n", + "0.151 | \n", + "0.045 | \n", + "0.079 | \n", + "0.125 | \n", + "0.142 | \n", + "0.122 | \n", + "0.082 | \n", + "0.066 | \n", + "0.000 | \n", + "0.004 | \n", + "0.022 | \n", + "||||||||||||||||||||||||||||||||||
standard | \n", + "0.088 | \n", + "0.048 | \n", + "0.055 | \n", + "0.044 | \n", + "0.094 | \n", + "0.042 | \n", + "0.013 | \n", + "0.037 | \n", + "0.034 | \n", + "0.219 | \n", + "0.140 | \n", + "0.170 | \n", + "0.166 | \n", + "0.144 | \n", + "0.163 | \n", + "0.099 | \n", + "0.061 | \n", + "0.104 | \n", + "0.117 | \n", + "0.108 | \n", + "0.031 | \n", + "0.036 | \n", + "0.046 | \n", + "0.079 | \n", + "0.032 | \n", + "0.103 | \n", + "0.121 | \n", + "0.086 | \n", + "0.088 | \n", + "0.036 | \n", + "0.038 | \n", + "0.007 | \n", + "||||||||||||||||||||||||||||||||||
standard_no_ontology | \n", + "0.108 | \n", + "0.063 | \n", + "0.064 | \n", + "0.060 | \n", + "0.066 | \n", + "0.033 | \n", + "0.013 | \n", + "0.042 | \n", + "0.035 | \n", + "0.096 | \n", + "0.028 | \n", + "0.073 | \n", + "0.029 | \n", + "0.035 | \n", + "0.037 | \n", + "0.012 | \n", + "0.050 | \n", + "0.032 | \n", + "0.051 | \n", + "0.022 | \n", + "0.030 | \n", + "0.036 | \n", + "0.008 | \n", + "0.013 | \n", + "0.033 | \n", + "0.043 | \n", + "0.032 | \n", + "0.013 | \n", + "0.011 | \n", + "0.001 | \n", + "0.001 | \n", + "0.014 | \n", + "||||||||||||||||||||||||||||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.251 | \n", + "0.212 | \n", + "0.233 | \n", + "0.187 | \n", + "0.226 | \n", + "0.125 | \n", + "0.110 | \n", + "0.148 | \n", + "0.132 | \n", + "0.242 | \n", + "0.109 | \n", + "0.167 | \n", + "0.071 | \n", + "0.112 | \n", + "0.121 | \n", + "0.053 | \n", + "0.117 | \n", + "0.087 | \n", + "0.174 | \n", + "0.098 | \n", + "0.041 | \n", + "0.068 | \n", + "0.027 | \n", + "0.060 | \n", + "0.048 | \n", + "0.080 | \n", + "0.091 | \n", + "0.069 | \n", + "0.030 | \n", + "0.020 | \n", + "0.021 | \n", + "0.004 | \n", + "|||||||||||||||||||||||||||||||||
no_synopsis | \n", + "0.194 | \n", + "0.181 | \n", + "0.216 | \n", + "0.147 | \n", + "0.212 | \n", + "0.102 | \n", + "0.112 | \n", + "0.104 | \n", + "0.115 | \n", + "0.183 | \n", + "0.110 | \n", + "0.133 | \n", + "0.085 | \n", + "0.121 | \n", + "0.119 | \n", + "0.054 | \n", + "0.091 | \n", + "0.073 | \n", + "0.164 | \n", + "0.099 | \n", + "0.036 | \n", + "0.059 | \n", + "0.019 | \n", + "0.051 | \n", + "0.037 | \n", + "0.091 | \n", + "0.074 | \n", + "0.060 | \n", + "0.036 | \n", + "0.017 | \n", + "0.033 | \n", + "0.006 | \n", + "||||||||||||||||||||||||||||||||||
ontological_synopsis | \n", + "0.278 | \n", + "0.145 | \n", + "0.170 | \n", + "0.163 | \n", + "0.148 | \n", + "0.106 | \n", + "0.044 | \n", + "0.115 | \n", + "0.093 | \n", + "0.190 | \n", + "0.088 | \n", + "0.154 | \n", + "0.071 | \n", + "0.084 | \n", + "0.115 | \n", + "0.048 | \n", + "0.117 | \n", + "0.073 | \n", + "0.134 | \n", + "0.082 | \n", + "0.064 | \n", + "0.088 | \n", + "0.031 | \n", + "0.057 | \n", + "0.066 | \n", + "0.040 | \n", + "0.060 | \n", + "0.066 | \n", + "0.026 | \n", + "0.020 | \n", + "0.002 | \n", + "0.007 | \n", + "||||||||||||||||||||||||||||||||||
text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.383 | \n", + "0.232 | \n", + "0.291 | \n", + "0.235 | \n", + "0.280 | \n", + "0.233 | \n", + "0.117 | \n", + "0.261 | \n", + "0.221 | \n", + "0.285 | \n", + "0.191 | \n", + "0.257 | \n", + "0.114 | \n", + "0.193 | \n", + "0.204 | \n", + "0.100 | \n", + "0.263 | \n", + "0.103 | \n", + "0.243 | \n", + "0.138 | \n", + "0.128 | \n", + "0.151 | \n", + "0.084 | \n", + "0.137 | \n", + "0.121 | \n", + "0.126 | \n", + "0.124 | \n", + "0.143 | \n", + "0.067 | \n", + "0.028 | \n", + "0.025 | \n", + "0.003 | \n", + "|||||||||||||||||||||||||||||||||
no_synopsis | \n", + "0.350 | \n", + "0.262 | \n", + "0.316 | \n", + "0.213 | \n", + "0.338 | \n", + "0.201 | \n", + "0.175 | \n", + "0.231 | \n", + "0.217 | \n", + "0.342 | \n", + "0.235 | \n", + "0.296 | \n", + "0.163 | \n", + "0.221 | \n", + "0.247 | \n", + "0.153 | \n", + "0.217 | \n", + "0.149 | \n", + "0.322 | \n", + "0.163 | \n", + "0.082 | \n", + "0.127 | \n", + "0.038 | \n", + "0.117 | \n", + "0.091 | \n", + "0.229 | \n", + "0.179 | \n", + "0.139 | \n", + "0.087 | \n", + "0.024 | \n", + "0.026 | \n", + "0.008 | \n", + "||||||||||||||||||||||||||||||||||
ontological_synopsis | \n", + "0.332 | \n", + "0.142 | \n", + "0.182 | \n", + "0.143 | \n", + "0.139 | \n", + "0.142 | \n", + "0.036 | \n", + "0.148 | \n", + "0.120 | \n", + "0.221 | \n", + "0.123 | \n", + "0.205 | \n", + "0.094 | \n", + "0.114 | \n", + "0.139 | \n", + "0.090 | \n", + "0.127 | \n", + "0.087 | \n", + "0.123 | \n", + "0.103 | \n", + "0.067 | \n", + "0.077 | \n", + "0.033 | \n", + "0.068 | \n", + "0.067 | \n", + "0.038 | \n", + "0.094 | \n", + "0.080 | \n", + "0.039 | \n", + "0.016 | \n", + "0.005 | \n", + "0.005 | \n", "
\n", " | \n", - " | goslim_generic | \n", - "anc_of_goslim_generic | \n", - "goslim_agr | \n", - "anc_of_goslim_agr | \n", - "closure_of_goslim_generic | \n", - "closure_of_goslim_agr | \n", + "goslim_generic | \n", + "anc_of_goslim_generic | \n", + "goslim_agr | \n", + "anc_of_goslim_agr | \n", + "closure_of_goslim_generic | \n", + "closure_of_goslim_agr | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -2217,115 +2364,115 @@ "||||||||||||||
N/A | \n", - "closure | \n", - "0.031 | \n", - "0.058 | \n", - "0.019 | \n", - "0.027 | \n", - "0.089 | \n", - "0.046 | \n", - "|||||||
random | \n", - "0.107 | \n", - "0.058 | \n", - "0.073 | \n", - "0.041 | \n", - "0.166 | \n", - "0.114 | \n", - "||||||||
rank_based | \n", - "0.216 | \n", - "0.134 | \n", - "0.180 | \n", - "0.091 | \n", - "0.350 | \n", - "0.271 | \n", - "||||||||
standard | \n", - "0.049 | \n", - "0.139 | \n", - "0.042 | \n", - "0.074 | \n", - "0.189 | \n", - "0.116 | \n", - "||||||||
standard_no_ontology | \n", - "0.056 | \n", - "0.024 | \n", - "0.036 | \n", - "0.014 | \n", - "0.080 | \n", - "0.050 | \n", - "||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.209 | \n", - "0.122 | \n", - "0.071 | \n", - "0.066 | \n", - "0.332 | \n", - "0.138 | \n", - "|||||||
no_synopsis | \n", - "0.160 | \n", - "0.103 | \n", - "0.030 | \n", - "0.063 | \n", - "0.263 | \n", - "0.093 | \n", - "||||||||
ontological_synopsis | \n", - "0.168 | \n", - "0.072 | \n", - "0.068 | \n", - "0.052 | \n", - "0.240 | \n", - "0.120 | \n", - "||||||||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.256 | \n", - "0.150 | \n", - "0.111 | \n", - "0.116 | \n", - "0.406 | \n", - "0.227 | \n", - "|||||||
no_synopsis | \n", - "0.241 | \n", - "0.207 | \n", - "0.127 | \n", - "0.105 | \n", - "0.447 | \n", - "0.232 | \n", - "||||||||
ontological_synopsis | \n", - "0.119 | \n", - "0.122 | \n", - "0.068 | \n", - "0.088 | \n", - "0.241 | \n", - "0.156 | \n", + "N/A | \n", + "closure | \n", + "0.027 | \n", + "0.045 | \n", + "0.015 | \n", + "0.019 | \n", + "0.072 | \n", + "0.034 | \n", + "
random | \n", + "0.100 | \n", + "0.058 | \n", + "0.075 | \n", + "0.037 | \n", + "0.158 | \n", + "0.112 | \n", + "||||||||
rank_based | \n", + "0.183 | \n", + "0.129 | \n", + "0.151 | \n", + "0.079 | \n", + "0.312 | \n", + "0.230 | \n", + "||||||||
standard | \n", + "0.048 | \n", + "0.144 | \n", + "0.036 | \n", + "0.079 | \n", + "0.192 | \n", + "0.115 | \n", + "||||||||
standard_no_ontology | \n", + "0.063 | \n", + "0.035 | \n", + "0.036 | \n", + "0.013 | \n", + "0.098 | \n", + "0.049 | \n", + "||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.212 | \n", + "0.112 | \n", + "0.068 | \n", + "0.060 | \n", + "0.324 | \n", + "0.128 | \n", + "|||||||
no_synopsis | \n", + "0.181 | \n", + "0.121 | \n", + "0.059 | \n", + "0.051 | \n", + "0.302 | \n", + "0.110 | \n", + "||||||||
ontological_synopsis | \n", + "0.145 | \n", + "0.084 | \n", + "0.088 | \n", + "0.057 | \n", + "0.229 | \n", + "0.145 | \n", + "||||||||
text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.232 | \n", + "0.193 | \n", + "0.151 | \n", + "0.137 | \n", + "0.425 | \n", + "0.288 | \n", + "|||||||
no_synopsis | \n", + "0.262 | \n", + "0.221 | \n", + "0.127 | \n", + "0.117 | \n", + "0.483 | \n", + "0.243 | \n", + "||||||||
ontological_synopsis | \n", + "0.142 | \n", + "0.114 | \n", + "0.077 | \n", + "0.068 | \n", + "0.256 | \n", + "0.145 | \n", "
\n", " | \n", - " | goslim_generic | \n", - "anc_of_goslim_generic | \n", - "goslim_agr | \n", - "anc_of_goslim_agr | \n", - "closure_of_goslim_generic | \n", - "closure_of_goslim_agr | \n", + "goslim_generic | \n", + "anc_of_goslim_generic | \n", + "goslim_agr | \n", + "anc_of_goslim_agr | \n", + "closure_of_goslim_generic | \n", + "closure_of_goslim_agr | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -2380,118 +2527,119 @@ "||||||||||||||
text-davinci-003 | \n", - "no_synopsis | \n", - "0.241 | \n", - "0.207 | \n", - "0.127 | \n", - "0.105 | \n", - "0.447 | \n", - "0.232 | \n", - "|||||||
narrative_synopsis | \n", - "0.256 | \n", - "0.150 | \n", - "0.111 | \n", - "0.116 | \n", - "0.406 | \n", - "0.227 | \n", - "||||||||
N/A | \n", - "rank_based | \n", - "0.216 | \n", - "0.134 | \n", - "0.180 | \n", - "0.091 | \n", - "0.350 | \n", - "0.271 | \n", - "|||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.209 | \n", - "0.122 | \n", - "0.071 | \n", - "0.066 | \n", - "0.332 | \n", - "0.138 | \n", - "|||||||
no_synopsis | \n", - "0.160 | \n", - "0.103 | \n", - "0.030 | \n", - "0.063 | \n", - "0.263 | \n", - "0.093 | \n", - "||||||||
text-davinci-003 | \n", - "ontological_synopsis | \n", - "0.119 | \n", - "0.122 | \n", - "0.068 | \n", - "0.088 | \n", - "0.241 | \n", - "0.156 | \n", - "|||||||
gpt-3.5-turbo | \n", - "ontological_synopsis | \n", - "0.168 | \n", - "0.072 | \n", - "0.068 | \n", - "0.052 | \n", - "0.240 | \n", - "0.120 | \n", - "|||||||
N/A | \n", - "standard | \n", - "0.049 | \n", - "0.139 | \n", - "0.042 | \n", - "0.074 | \n", - "0.189 | \n", - "0.116 | \n", - "|||||||
random | \n", - "0.107 | \n", - "0.058 | \n", - "0.073 | \n", - "0.041 | \n", - "0.166 | \n", - "0.114 | \n", - "||||||||
closure | \n", - "0.031 | \n", - "0.058 | \n", - "0.019 | \n", - "0.027 | \n", - "0.089 | \n", - "0.046 | \n", - "||||||||
standard_no_ontology | \n", - "0.056 | \n", - "0.024 | \n", - "0.036 | \n", - "0.014 | \n", - "0.080 | \n", - "0.050 | \n", + "text-davinci-003 | \n", + "no_synopsis | \n", + "0.262 | \n", + "0.221 | \n", + "0.127 | \n", + "0.117 | \n", + "0.483 | \n", + "0.243 | \n", + "
narrative_synopsis | \n", + "0.232 | \n", + "0.193 | \n", + "0.151 | \n", + "0.137 | \n", + "0.425 | \n", + "0.288 | \n", + "||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.212 | \n", + "0.112 | \n", + "0.068 | \n", + "0.060 | \n", + "0.324 | \n", + "0.128 | \n", + "|||||||
N/A | \n", + "rank_based | \n", + "0.183 | \n", + "0.129 | \n", + "0.151 | \n", + "0.079 | \n", + "0.312 | \n", + "0.230 | \n", + "|||||||
gpt-3.5-turbo | \n", + "no_synopsis | \n", + "0.181 | \n", + "0.121 | \n", + "0.059 | \n", + "0.051 | \n", + "0.302 | \n", + "0.110 | \n", + "|||||||
text-davinci-003 | \n", + "ontological_synopsis | \n", + "0.142 | \n", + "0.114 | \n", + "0.077 | \n", + "0.068 | \n", + "0.256 | \n", + "0.145 | \n", + "|||||||
gpt-3.5-turbo | \n", + "ontological_synopsis | \n", + "0.145 | \n", + "0.084 | \n", + "0.088 | \n", + "0.057 | \n", + "0.229 | \n", + "0.145 | \n", + "|||||||
N/A | \n", + "standard | \n", + "0.048 | \n", + "0.144 | \n", + "0.036 | \n", + "0.079 | \n", + "0.192 | \n", + "0.115 | \n", + "|||||||
random | \n", + "0.100 | \n", + "0.058 | \n", + "0.075 | \n", + "0.037 | \n", + "0.158 | \n", + "0.112 | \n", + "||||||||
standard_no_ontology | \n", + "0.063 | \n", + "0.035 | \n", + "0.036 | \n", + "0.013 | \n", + "0.098 | \n", + "0.049 | \n", + "||||||||
closure | \n", + "0.027 | \n", + "0.045 | \n", + "0.015 | \n", + "0.019 | \n", + "0.072 | \n", + "0.034 | \n", "
\n", " | \n", - " | num GO terms | \n", - "size overlap | \n", - "nr size overlap | \n", + "num GO terms | \n", + "size overlap | \n", + "nr size overlap | \n", "||
---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -2533,76 +2699,76 @@ "|||||||||
N/A | \n", - "closure | \n", - "3339.519 | \n", - "161.577 | \n", - "2.692 | \n", + "N/A | \n", + "closure | \n", + "5015.814 | \n", + "229.364 | \n", + "2.214 | \n", "
random | \n", - "64.019 | \n", - "3.885 | \n", - "0.308 | \n", + "random | \n", + "99.721 | \n", + "7.607 | \n", + "0.564 | \n", "||
rank_based | \n", - "71.692 | \n", - "8.212 | \n", - "0.308 | \n", + "rank_based | \n", + "113.714 | \n", + "15.950 | \n", + "0.814 | \n", "||
standard_no_ontology | \n", - "46.481 | \n", - "37.846 | \n", - "5.288 | \n", + "standard_no_ontology | \n", + "54.986 | \n", + "45.771 | \n", + "4.779 | \n", "||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "3.769 | \n", - "2.115 | \n", - "0.462 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "4.014 | \n", + "2.407 | \n", + "0.521 | \n", "
no_synopsis | \n", - "5.769 | \n", - "3.115 | \n", - "0.558 | \n", + "no_synopsis | \n", + "4.607 | \n", + "3.071 | \n", + "0.529 | \n", "||
ontological_synopsis | \n", - "4.808 | \n", - "2.846 | \n", - "0.577 | \n", + "ontological_synopsis | \n", + "3.900 | \n", + "2.186 | \n", + "0.471 | \n", "||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "3.981 | \n", - "1.308 | \n", - "0.346 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", + "4.593 | \n", + "1.593 | \n", + "0.343 | \n", "
no_synopsis | \n", - "4.558 | \n", - "1.615 | \n", - "0.346 | \n", + "no_synopsis | \n", + "3.550 | \n", + "1.464 | \n", + "0.293 | \n", "||
ontological_synopsis | \n", - "6.788 | \n", - "2.250 | \n", - "0.462 | \n", + "ontological_synopsis | \n", + "6.586 | \n", + "1.829 | \n", + "0.393 | \n", "
\n", " | \n", - " | anc_of_goslim_generic | \n", - "anc_of_goslim_agr | \n", + "anc_of_goslim_generic | \n", + "anc_of_goslim_agr | \n", "||
---|---|---|---|---|---|---|---|
model | \n", @@ -2642,74 +2808,73 @@ "|||||||
N/A | \n", - "standard_no_ontology | \n", - "0.024 | \n", - "0.014 | \n", + "N/A | \n", + "standard_no_ontology | \n", + "0.035 | \n", + "0.013 | \n", "
closure | \n", - "0.058 | \n", - "0.027 | \n", + "closure | \n", + "0.045 | \n", + "0.019 | \n", "||
random | \n", - "0.058 | \n", - "0.041 | \n", + "random | \n", + "0.058 | \n", + "0.037 | \n", "||
gpt-3.5-turbo | \n", - "ontological_synopsis | \n", - "0.072 | \n", - "0.052 | \n", + "gpt-3.5-turbo | \n", + "no_synopsis | \n", + "0.121 | \n", + "0.051 | \n", "
no_synopsis | \n", - "0.103 | \n", - "0.063 | \n", + "ontological_synopsis | \n", + "0.084 | \n", + "0.057 | \n", "||
narrative_synopsis | \n", - "0.122 | \n", - "0.066 | \n", + "narrative_synopsis | \n", + "0.112 | \n", + "0.060 | \n", "||
N/A | \n", - "standard | \n", - "0.139 | \n", - "0.074 | \n", + "text-davinci-003 | \n", + "ontological_synopsis | \n", + "0.114 | \n", + "0.068 | \n", "
text-davinci-003 | \n", - "ontological_synopsis | \n", - "0.122 | \n", - "0.088 | \n", + "N/A | \n", + "standard | \n", + "0.144 | \n", + "0.079 | \n", "
N/A | \n", - "rank_based | \n", - "0.134 | \n", - "0.091 | \n", + "rank_based | \n", + "0.129 | \n", + "0.079 | \n", "|
text-davinci-003 | \n", - "no_synopsis | \n", - "0.207 | \n", - "0.105 | \n", + "text-davinci-003 | \n", + "no_synopsis | \n", + "0.221 | \n", + "0.117 | \n", "
narrative_synopsis | \n", - "0.150 | \n", - "0.116 | \n", + "narrative_synopsis | \n", + "0.193 | \n", + "0.137 | \n", "
\n", " | \n", - " | has top hit | \n", - "in top 5 | \n", - "in top 10 | \n", - "size overlap | \n", - "similarity | \n", - "num terms | \n", - "num GO terms | \n", - "nr size overlap | \n", - "nr similarity | \n", - "mean p value | \n", - "min p value | \n", - "max p value | \n", - "proportion significant | \n", - "num novel | \n", + "has top hit | \n", + "in top 5 | \n", + "in top 10 | \n", + "size overlap | \n", + "similarity | \n", + "num terms | \n", + "num GO terms | \n", + "nr size overlap | \n", + "nr similarity | \n", + "mean p value | \n", + "min p value | \n", + "max p value | \n", + "proportion significant | \n", + "num novel | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -2823,203 +2970,203 @@ "||||||||||||||||||||||||||||||
N/A | \n", - "closure | \n", - "1.000 | \n", - "0.000 | \n", - "0.000 | \n", - "161.577 | \n", - "0.076 | \n", - "3388.462 | \n", - "3339.519 | \n", - "2.692 | \n", - "0.018 | \n", - "0.918 | \n", - "0.000 | \n", - "1.000 | \n", - "0.082 | \n", - "0.000 | \n", - "|||||||||||||||
random | \n", - "0.038 | \n", - "0.019 | \n", - "0.019 | \n", - "3.885 | \n", - "0.011 | \n", - "64.019 | \n", - "64.019 | \n", - "0.308 | \n", - "0.004 | \n", - "0.960 | \n", - "0.385 | \n", - "1.000 | \n", - "0.040 | \n", - "30.423 | \n", - "||||||||||||||||
rank_based | \n", - "0.038 | \n", - "0.000 | \n", - "0.000 | \n", - "8.212 | \n", - "0.024 | \n", - "71.692 | \n", - "71.692 | \n", - "0.308 | \n", - "0.009 | \n", - "0.915 | \n", - "0.251 | \n", - "1.000 | \n", - "0.086 | \n", - "7.385 | \n", - "||||||||||||||||
standard | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "161.577 | \n", - "0.970 | \n", - "167.731 | \n", - "161.577 | \n", - "14.673 | \n", - "0.974 | \n", - "0.008 | \n", - "0.000 | \n", - "0.046 | \n", - "1.000 | \n", - "0.000 | \n", - "||||||||||||||||
standard_no_ontology | \n", - "0.596 | \n", - "0.462 | \n", - "0.481 | \n", - "37.846 | \n", - "0.244 | \n", - "46.481 | \n", - "46.481 | \n", - "5.288 | \n", - "0.205 | \n", - "0.232 | \n", - "0.000 | \n", - "0.981 | \n", - "0.773 | \n", - "0.000 | \n", - "||||||||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.154 | \n", - "0.154 | \n", - "0.154 | \n", - "2.115 | \n", - "0.018 | \n", - "5.404 | \n", - "3.769 | \n", - "0.462 | \n", - "0.035 | \n", - "0.438 | \n", - "0.171 | \n", - "0.745 | \n", - "0.564 | \n", - "0.212 | \n", - "|||||||||||||||
no_synopsis | \n", - "0.154 | \n", - "0.135 | \n", - "0.154 | \n", - "3.115 | \n", - "0.027 | \n", - "7.288 | \n", - "5.769 | \n", - "0.558 | \n", - "0.033 | \n", - "0.428 | \n", - "0.103 | \n", - "0.736 | \n", - "0.573 | \n", - "0.481 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "0.269 | \n", - "0.250 | \n", - "0.269 | \n", - "2.846 | \n", - "0.031 | \n", - "6.212 | \n", - "4.808 | \n", - "0.577 | \n", - "0.039 | \n", - "0.386 | \n", - "0.116 | \n", - "0.675 | \n", - "0.615 | \n", - "0.077 | \n", - "||||||||||||||||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.077 | \n", - "0.077 | \n", - "0.077 | \n", - "1.308 | \n", - "0.010 | \n", - "10.635 | \n", - "3.981 | \n", - "0.346 | \n", - "0.021 | \n", - "0.642 | \n", - "0.284 | \n", - "0.891 | \n", - "0.360 | \n", - "0.327 | \n", - "|||||||||||||||
no_synopsis | \n", - "0.135 | \n", - "0.115 | \n", - "0.135 | \n", - "1.615 | \n", - "0.009 | \n", - "8.846 | \n", - "4.558 | \n", - "0.346 | \n", - "0.017 | \n", - "0.650 | \n", - "0.346 | \n", - "0.885 | \n", - "0.351 | \n", - "0.673 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "0.135 | \n", - "0.077 | \n", - "0.135 | \n", - "2.250 | \n", - "0.018 | \n", - "11.442 | \n", - "6.788 | \n", - "0.462 | \n", - "0.024 | \n", - "0.646 | \n", - "0.232 | \n", - "0.943 | \n", - "0.355 | \n", - "0.442 | \n", + "N/A | \n", + "closure | \n", + "1.000 | \n", + "0.014 | \n", + "0.014 | \n", + "229.364 | \n", + "0.068 | \n", + "5078.164 | \n", + "5015.814 | \n", + "2.214 | \n", + "0.009 | \n", + "0.929 | \n", + "0.000 | \n", + "1.000 | \n", + "0.071 | \n", + "0.000 | \n", + "
random | \n", + "0.043 | \n", + "0.007 | \n", + "0.007 | \n", + "7.607 | \n", + "0.019 | \n", + "99.721 | \n", + "99.721 | \n", + "0.564 | \n", + "0.008 | \n", + "0.934 | \n", + "0.122 | \n", + "1.000 | \n", + "0.067 | \n", + "39.329 | \n", + "||||||||||||||||
rank_based | \n", + "0.157 | \n", + "0.014 | \n", + "0.014 | \n", + "15.950 | \n", + "0.038 | \n", + "113.714 | \n", + "113.714 | \n", + "0.814 | \n", + "0.014 | \n", + "0.877 | \n", + "0.087 | \n", + "1.000 | \n", + "0.124 | \n", + "7.543 | \n", + "||||||||||||||||
standard | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "229.364 | \n", + "0.966 | \n", + "236.457 | \n", + "229.364 | \n", + "17.843 | \n", + "0.965 | \n", + "0.007 | \n", + "0.000 | \n", + "0.047 | \n", + "1.000 | \n", + "0.000 | \n", + "||||||||||||||||
standard_no_ontology | \n", + "0.507 | \n", + "0.379 | \n", + "0.407 | \n", + "45.771 | \n", + "0.193 | \n", + "54.986 | \n", + "54.986 | \n", + "4.779 | \n", + "0.140 | \n", + "0.218 | \n", + "0.000 | \n", + "1.000 | \n", + "0.787 | \n", + "0.000 | \n", + "||||||||||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.150 | \n", + "0.143 | \n", + "0.150 | \n", + "2.407 | \n", + "0.014 | \n", + "5.721 | \n", + "4.014 | \n", + "0.521 | \n", + "0.026 | \n", + "0.382 | \n", + "0.135 | \n", + "0.672 | \n", + "0.619 | \n", + "0.193 | \n", + "|||||||||||||||
no_synopsis | \n", + "0.150 | \n", + "0.143 | \n", + "0.143 | \n", + "3.071 | \n", + "0.018 | \n", + "5.521 | \n", + "4.607 | \n", + "0.529 | \n", + "0.029 | \n", + "0.345 | \n", + "0.089 | \n", + "0.669 | \n", + "0.657 | \n", + "0.229 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "0.157 | \n", + "0.150 | \n", + "0.157 | \n", + "2.186 | \n", + "0.016 | \n", + "5.979 | \n", + "3.900 | \n", + "0.471 | \n", + "0.030 | \n", + "0.437 | \n", + "0.197 | \n", + "0.718 | \n", + "0.564 | \n", + "0.093 | \n", + "||||||||||||||||
text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.071 | \n", + "0.064 | \n", + "0.071 | \n", + "1.593 | \n", + "0.009 | \n", + "12.679 | \n", + "4.593 | \n", + "0.343 | \n", + "0.017 | \n", + "0.621 | \n", + "0.245 | \n", + "0.914 | \n", + "0.380 | \n", + "0.364 | \n", + "|||||||||||||||
no_synopsis | \n", + "0.064 | \n", + "0.057 | \n", + "0.064 | \n", + "1.464 | \n", + "0.008 | \n", + "11.686 | \n", + "3.550 | \n", + "0.293 | \n", + "0.013 | \n", + "0.555 | \n", + "0.261 | \n", + "0.822 | \n", + "0.447 | \n", + "0.350 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "0.121 | \n", + "0.050 | \n", + "0.093 | \n", + "1.829 | \n", + "0.011 | \n", + "13.157 | \n", + "6.586 | \n", + "0.393 | \n", + "0.018 | \n", + "0.695 | \n", + "0.303 | \n", + "0.971 | \n", + "0.306 | \n", + "0.279 | \n", "
\n", " | \n", - " | proportion significant | \n", - "num GO terms | \n", - "has top hit | \n", - "num novel | \n", + "proportion significant | \n", + "num GO terms | \n", + "has top hit | \n", + "num novel | \n", "||
---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -3064,77 +3211,69 @@ "|||||||||||
N/A | \n", - "closure | \n", - "0.082 | \n", - "3339.519 | \n", - "1.000 | \n", - "0.000 | \n", - "||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.564 | \n", - "3.769 | \n", - "0.154 | \n", - "0.212 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.619 | \n", + "4.014 | \n", + "0.150 | \n", + "0.193 | \n", "
no_synopsis | \n", - "0.573 | \n", - "5.769 | \n", - "0.154 | \n", - "0.481 | \n", + "no_synopsis | \n", + "0.657 | \n", + "4.607 | \n", + "0.150 | \n", + "0.229 | \n", "||
ontological_synopsis | \n", - "0.615 | \n", - "4.808 | \n", - "0.269 | \n", - "0.077 | \n", + "ontological_synopsis | \n", + "0.564 | \n", + "3.900 | \n", + "0.157 | \n", + "0.093 | \n", "||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.360 | \n", - "3.981 | \n", - "0.077 | \n", - "0.327 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.380 | \n", + "4.593 | \n", + "0.071 | \n", + "0.364 | \n", "
no_synopsis | \n", - "0.351 | \n", - "4.558 | \n", - "0.135 | \n", - "0.673 | \n", + "no_synopsis | \n", + "0.447 | \n", + "3.550 | \n", + "0.064 | \n", + "0.350 | \n", "||
ontological_synopsis | \n", - "0.355 | \n", - "6.788 | \n", - "0.135 | \n", - "0.442 | \n", + "ontological_synopsis | \n", + "0.306 | \n", + "6.586 | \n", + "0.121 | \n", + "0.279 | \n", "
\n", " | \n", - " | proportion significant | \n", - "num GO terms | \n", - "has top hit | \n", - "num novel | \n", + "proportion significant | \n", + "num GO terms | \n", + "has top hit | \n", + "num novel | \n", "||
---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -3167,57 +3306,57 @@ "|||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.567 | \n", - "3.346 | \n", - "0.154 | \n", - "0.269 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.617 | \n", + "3.871 | \n", + "0.100 | \n", + "0.171 | \n", "
no_synopsis | \n", - "0.565 | \n", - "6.115 | \n", - "0.115 | \n", - "0.462 | \n", + "no_synopsis | \n", + "0.669 | \n", + "4.614 | \n", + "0.129 | \n", + "0.257 | \n", "||
ontological_synopsis | \n", - "0.645 | \n", - "4.462 | \n", - "0.192 | \n", - "0.038 | \n", + "ontological_synopsis | \n", + "0.590 | \n", + "4.200 | \n", + "0.171 | \n", + "0.071 | \n", "||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.402 | \n", - "4.231 | \n", - "0.077 | \n", - "0.385 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.382 | \n", + "4.600 | \n", + "0.057 | \n", + "0.343 | \n", "
no_synopsis | \n", - "0.372 | \n", - "4.615 | \n", - "0.154 | \n", - "0.769 | \n", + "no_synopsis | \n", + "0.484 | \n", + "3.614 | \n", + "0.071 | \n", + "0.329 | \n", "||
ontological_synopsis | \n", - "0.353 | \n", - "6.962 | \n", - "0.115 | \n", - "0.462 | \n", + "ontological_synopsis | \n", + "0.311 | \n", + "5.943 | \n", + "0.100 | \n", + "0.271 | \n", "
\n", " | \n", - " | has top hit | \n", - "in top 5 | \n", - "in top 10 | \n", - "size overlap | \n", - "similarity | \n", - "num terms | \n", - "num GO terms | \n", - "nr size overlap | \n", - "nr similarity | \n", - "mean p value | \n", - "min p value | \n", - "max p value | \n", - "proportion significant | \n", - "num novel | \n", + "has top hit | \n", + "in top 5 | \n", + "in top 10 | \n", + "size overlap | \n", + "similarity | \n", + "num terms | \n", + "num GO terms | \n", + "nr size overlap | \n", + "nr similarity | \n", + "mean p value | \n", + "min p value | \n", + "max p value | \n", + "proportion significant | \n", + "num novel | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -3290,186 +3429,203 @@ "||||||||||||||||||||||||||||||
N/A | \n", - "random | \n", - "True | \n", - "True | \n", - "True | \n", - "27 | \n", - "0.046 | \n", - "182 | \n", - "182 | \n", - "2 | \n", - "0.067 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "0.163 | \n", - "75 | \n", - "|||||||||||||||
rank_based | \n", - "True | \n", - "False | \n", - "False | \n", - "50 | \n", - "0.090 | \n", - "200 | \n", - "200 | \n", - "2 | \n", - "0.048 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "0.333 | \n", - "53 | \n", - "||||||||||||||||
standard | \n", - "True | \n", - "True | \n", - "True | \n", - "491 | \n", - "1.000 | \n", - "491 | \n", - "491 | \n", - "33 | \n", - "1.000 | \n", - "0.024 | \n", - "0.000 | \n", - "0.050 | \n", - "1.000 | \n", - "0 | \n", - "||||||||||||||||
standard_no_ontology | \n", - "True | \n", - "True | \n", - "True | \n", - "101 | \n", - "0.449 | \n", - "113 | \n", - "113 | \n", - "11 | \n", - "0.800 | \n", - "0.541 | \n", - "0.000 | \n", - "1.000 | \n", - "1.000 | \n", - "0 | \n", - "||||||||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "7 | \n", - "0.143 | \n", - "14 | \n", - "11 | \n", - "3 | \n", - "0.333 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "2 | \n", - "|||||||||||||||
no_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "9 | \n", - "0.125 | \n", - "40 | \n", - "19 | \n", - "3 | \n", - "0.250 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "3 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "9 | \n", - "0.182 | \n", - "11 | \n", - "10 | \n", - "2 | \n", - "0.286 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1 | \n", - "||||||||||||||||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "7 | \n", - "0.044 | \n", - "28 | \n", - "12 | \n", - "2 | \n", - "0.182 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "3 | \n", - "|||||||||||||||
no_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "9 | \n", - "0.060 | \n", - "20 | \n", - "12 | \n", - "3 | \n", - "0.158 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "4 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "9 | \n", - "0.116 | \n", - "28 | \n", - "20 | \n", - "3 | \n", - "0.188 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "1.000 | \n", - "3 | \n", + "N/A | \n", + "closure | \n", + "True | \n", + "True | \n", + "True | \n", + "872 | \n", + "0.235 | \n", + "9056 | \n", + "8977 | \n", + "12 | \n", + "0.135 | \n", + "0.996 | \n", + "0.002 | \n", + "1.000 | \n", + "0.261 | \n", + "0 | \n", + "
random | \n", + "True | \n", + "True | \n", + "True | \n", + "35 | \n", + "0.083 | \n", + "182 | \n", + "182 | \n", + "3 | \n", + "0.111 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "0.250 | \n", + "87 | \n", + "||||||||||||||||
rank_based | \n", + "True | \n", + "True | \n", + "True | \n", + "58 | \n", + "0.090 | \n", + "200 | \n", + "200 | \n", + "6 | \n", + "0.182 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "0.343 | \n", + "53 | \n", + "||||||||||||||||
standard | \n", + "True | \n", + "True | \n", + "True | \n", + "872 | \n", + "1.000 | \n", + "873 | \n", + "872 | \n", + "40 | \n", + "1.000 | \n", + "0.024 | \n", + "0.002 | \n", + "0.050 | \n", + "1.000 | \n", + "0 | \n", + "||||||||||||||||
standard_no_ontology | \n", + "True | \n", + "True | \n", + "True | \n", + "199 | \n", + "0.449 | \n", + "227 | \n", + "227 | \n", + "18 | \n", + "0.800 | \n", + "0.669 | \n", + "0.025 | \n", + "1.000 | \n", + "0.969 | \n", + "0 | \n", + "||||||||||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "8 | \n", + "0.100 | \n", + "17 | \n", + "11 | \n", + "4 | \n", + "0.200 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "3 | \n", + "|||||||||||||||
no_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "11 | \n", + "0.167 | \n", + "14 | \n", + "12 | \n", + "3 | \n", + "0.250 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "3 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "8 | \n", + "0.222 | \n", + "17 | \n", + "13 | \n", + "3 | \n", + "0.667 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1 | \n", + "||||||||||||||||
text-davinci-003 | \n", + "narrative_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "7 | \n", + "0.083 | \n", + "34 | \n", + "17 | \n", + "2 | \n", + "0.125 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "3 | \n", + "|||||||||||||||
no_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "7 | \n", + "0.078 | \n", + "61 | \n", + "11 | \n", + "2 | \n", + "0.118 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "4 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "True | \n", + "True | \n", + "True | \n", + "7 | \n", + "0.130 | \n", + "31 | \n", + "21 | \n", + "4 | \n", + "0.182 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "1.000 | \n", + "2 | \n", "
14 rows × 1 columns
\n", + "21 rows × 1 columns
\n", "" ], "text/plain": [ - " source geneset\n", - "0 EDS\n", - "22 FA\n", - "88 HALLMARK_HEDGEHOG_SIGNALING\n", - "176 Yamanaka-TFs\n", - "198 amigo-example\n", - ".. ...\n", - "418 molecular sequestering\n", - "462 peroxisome\n", - "484 progeria\n", - "506 regulation of presynaptic membrane potential\n", - "528 sensory ataxia\n", + " source geneset\n", + "0 EDS\n", + "22 FA\n", + "110 HALLMARK_ANGIOGENESIS\n", + "154 HALLMARK_APICAL_SURFACE\n", + "462 HALLMARK_HEDGEHOG_SIGNALING\n", + "... ...\n", + "1386 molecular sequestering\n", + "1430 peroxisome\n", + "1452 progeria\n", + "1474 regulation of presynaptic membrane potential\n", + "1496 sensory ataxia\n", "\n", - "[14 rows x 1 columns]" + "[21 rows x 1 columns]" ] }, - "execution_count": 28, + "execution_count": 29, "metadata": {}, "output_type": "execute_result" } @@ -3660,7 +3816,7 @@ }, { "cell_type": "code", - "execution_count": 29, + "execution_count": 30, "id": "2ab6ac9f", "metadata": {}, "outputs": [ @@ -3722,53 +3878,70 @@ " \n", " \n", "11 rows × 14 columns
\n", "" ], "text/plain": [ " has top hit in top 5 in top 10 \\\n", "model method \n", - "N/A random 0.00 0.00 0.00 \n", - " rank_based 0.00 0.00 0.00 \n", + "N/A closure 1.00 0.00 0.00 \n", + " random 0.00 0.00 0.00 \n", + " rank_based 0.05 0.00 0.00 \n", " standard 1.00 1.00 1.00 \n", - " standard_no_ontology 0.64 0.54 0.54 \n", - "gpt-3.5-turbo narrative_synopsis 0.18 0.18 0.18 \n", - " no_synopsis 0.18 0.14 0.18 \n", - " ontological_synopsis 0.39 0.39 0.39 \n", - "text-davinci-003 narrative_synopsis 0.07 0.07 0.07 \n", - " no_synopsis 0.14 0.14 0.14 \n", - " ontological_synopsis 0.25 0.14 0.25 \n", + " standard_no_ontology 0.64 0.57 0.57 \n", + "... ... ... ... \n", + "gpt-3.5-turbo no_synopsis 0.21 0.21 0.21 \n", + " ontological_synopsis 0.45 0.43 0.45 \n", + "text-davinci-003 narrative_synopsis 0.10 0.10 0.10 \n", + " no_synopsis 0.07 0.07 0.07 \n", + " ontological_synopsis 0.29 0.14 0.24 \n", "\n", " size overlap similarity num terms \\\n", "model method \n", - "N/A random 0.64 3.79e-03 20.43 \n", - " rank_based 1.43 8.44e-03 21.07 \n", - " standard 117.54 9.83e-01 120.82 \n", - " standard_no_ontology 29.11 2.53e-01 37.89 \n", - "gpt-3.5-turbo narrative_synopsis 1.50 1.92e-02 5.25 \n", - " no_synopsis 2.25 2.97e-02 6.07 \n", - " ontological_synopsis 2.82 4.49e-02 5.79 \n", - "text-davinci-003 narrative_synopsis 0.89 8.48e-03 8.54 \n", - " no_synopsis 0.96 7.69e-03 7.96 \n", - " ontological_synopsis 2.50 2.40e-02 10.57 \n", + "N/A closure 126.12 7.58e-02 2422.12 \n", + " random 1.07 8.70e-03 25.07 \n", + " rank_based 2.57 1.68e-02 26.10 \n", + " standard 126.12 9.83e-01 129.12 \n", + " standard_no_ontology 26.93 2.15e-01 36.05 \n", + "... ... ... ... \n", + "gpt-3.5-turbo no_synopsis 2.10 2.48e-02 4.88 \n", + " ontological_synopsis 2.74 3.29e-02 5.86 \n", + "text-davinci-003 narrative_synopsis 1.36 1.25e-02 9.55 \n", + " no_synopsis 1.07 1.10e-02 10.45 \n", + " ontological_synopsis 2.02 1.99e-02 11.55 \n", "\n", " num GO terms nr size overlap \\\n", "model method \n", - "N/A random 20.43 0.07 \n", - " rank_based 21.07 0.21 \n", - " standard 117.54 14.14 \n", - " standard_no_ontology 37.89 5.11 \n", - "gpt-3.5-turbo narrative_synopsis 3.00 0.43 \n", - " no_synopsis 5.18 0.54 \n", - " ontological_synopsis 4.86 0.75 \n", - "text-davinci-003 narrative_synopsis 2.68 0.32 \n", - " no_synopsis 3.96 0.32 \n", - " ontological_synopsis 7.43 0.54 \n", + "N/A closure 2378.76 3.31 \n", + " random 25.07 0.38 \n", + " rank_based 26.10 0.40 \n", + " standard 126.12 16.29 \n", + " standard_no_ontology 36.05 5.81 \n", + "... ... ... \n", + "gpt-3.5-turbo no_synopsis 4.07 0.69 \n", + " ontological_synopsis 4.76 0.93 \n", + "text-davinci-003 narrative_synopsis 3.17 0.38 \n", + " no_synopsis 3.00 0.19 \n", + " ontological_synopsis 7.19 0.74 \n", "\n", " nr similarity mean p value \\\n", "model method \n", - "N/A random 2.38e-03 9.77e-01 \n", - " rank_based 8.31e-03 9.47e-01 \n", - " standard 9.73e-01 9.09e-03 \n", - " standard_no_ontology 2.09e-01 2.75e-01 \n", - "gpt-3.5-turbo narrative_synopsis 3.82e-02 5.04e-01 \n", - " no_synopsis 3.63e-02 4.74e-01 \n", - " ontological_synopsis 5.51e-02 3.89e-01 \n", - "text-davinci-003 narrative_synopsis 1.75e-02 6.52e-01 \n", - " no_synopsis 1.44e-02 7.33e-01 \n", - " ontological_synopsis 2.82e-02 6.43e-01 \n", + "N/A closure 0.02 9.19e-01 \n", + " random 0.01 9.55e-01 \n", + " rank_based 0.02 9.17e-01 \n", + " standard 0.98 9.45e-03 \n", + " standard_no_ontology 0.21 2.85e-01 \n", + "... ... ... \n", + "gpt-3.5-turbo no_synopsis 0.04 4.73e-01 \n", + " ontological_synopsis 0.07 3.89e-01 \n", + "text-davinci-003 narrative_synopsis 0.02 5.81e-01 \n", + " no_synopsis 0.01 5.78e-01 \n", + " ontological_synopsis 0.04 6.71e-01 \n", "\n", " min p value max p value \\\n", "model method \n", - "N/A random 6.43e-01 1.00 \n", - " rank_based 3.95e-01 1.00 \n", - " standard 5.83e-06 0.05 \n", - " standard_no_ontology 2.89e-05 0.97 \n", - "gpt-3.5-turbo narrative_synopsis 2.62e-01 0.70 \n", - " no_synopsis 1.17e-01 0.69 \n", - " ontological_synopsis 7.30e-02 0.68 \n", - "text-davinci-003 narrative_synopsis 3.76e-01 0.83 \n", - " no_synopsis 4.64e-01 0.93 \n", - " ontological_synopsis 2.16e-01 1.00 \n", + "N/A closure 4.59e-05 1.00 \n", + " random 3.60e-01 1.00 \n", + " rank_based 2.41e-01 1.00 \n", + " standard 4.59e-05 0.05 \n", + " standard_no_ontology 6.19e-04 1.00 \n", + "... ... ... \n", + "gpt-3.5-turbo no_synopsis 1.47e-01 0.85 \n", + " ontological_synopsis 9.69e-02 0.74 \n", + "text-davinci-003 narrative_synopsis 3.44e-01 0.83 \n", + " no_synopsis 3.43e-01 0.79 \n", + " ontological_synopsis 2.70e-01 0.95 \n", "\n", " proportion significant num novel \n", "model method \n", - "N/A random 0.02 12.71 \n", - " rank_based 0.05 2.11 \n", + "N/A closure 0.08 0.00 \n", + " random 0.05 13.76 \n", + " rank_based 0.08 2.17 \n", " standard 1.00 0.00 \n", - " standard_no_ontology 0.73 0.00 \n", - "gpt-3.5-turbo narrative_synopsis 0.50 0.18 \n", - " no_synopsis 0.53 0.57 \n", - " ontological_synopsis 0.61 0.07 \n", - "text-davinci-003 narrative_synopsis 0.35 0.21 \n", - " no_synopsis 0.27 0.96 \n", - " ontological_synopsis 0.36 0.68 " + " standard_no_ontology 0.72 0.00 \n", + "... ... ... \n", + "gpt-3.5-turbo no_synopsis 0.53 0.21 \n", + " ontological_synopsis 0.61 0.10 \n", + "text-davinci-003 narrative_synopsis 0.42 0.26 \n", + " no_synopsis 0.42 0.38 \n", + " ontological_synopsis 0.33 0.21 \n", + "\n", + "[11 rows x 14 columns]" ] }, - "execution_count": 29, + "execution_count": 30, "metadata": {}, "output_type": "execute_result" } @@ -3991,7 +4174,7 @@ }, { "cell_type": "code", - "execution_count": 30, + "execution_count": 31, "id": "7ec9701c", "metadata": {}, "outputs": [ @@ -3999,29 +4182,29 @@ "data": { "text/html": [ "\n", - "\n", " | \n", - " | has top hit | \n", - "in top 5 | \n", - "in top 10 | \n", - "size overlap | \n", - "similarity | \n", - "num terms | \n", - "num GO terms | \n", - "nr size overlap | \n", - "nr similarity | \n", - "mean p value | \n", - "min p value | \n", - "max p value | \n", - "proportion significant | \n", - "num novel | \n", + "has top hit | \n", + "in top 5 | \n", + "in top 10 | \n", + "size overlap | \n", + "similarity | \n", + "num terms | \n", + "num GO terms | \n", + "nr size overlap | \n", + "nr similarity | \n", + "mean p value | \n", + "min p value | \n", + "max p value | \n", + "proportion significant | \n", + "num novel | \n", "|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -4044,169 +4227,186 @@ "||||||||||||||||||||||||||||||
N/A | \n", - "random | \n", - "0.000 | \n", - "0.000 | \n", - "0.000 | \n", - "0.643 | \n", - "0.004 | \n", - "20.429 | \n", - "20.429 | \n", - "0.071 | \n", - "0.002 | \n", - "0.977 | \n", - "0.643 | \n", - "1.000 | \n", - "0.023 | \n", - "12.714 | \n", - "|||||||||||||||
rank_based | \n", - "0.000 | \n", - "0.000 | \n", - "0.000 | \n", - "1.429 | \n", - "0.008 | \n", - "21.071 | \n", - "21.071 | \n", - "0.214 | \n", - "0.008 | \n", - "0.947 | \n", - "0.395 | \n", - "1.000 | \n", - "0.054 | \n", - "2.107 | \n", - "||||||||||||||||
standard_no_ontology | \n", - "0.643 | \n", - "0.536 | \n", - "0.536 | \n", - "29.107 | \n", - "0.253 | \n", - "37.893 | \n", - "37.893 | \n", - "5.107 | \n", - "0.209 | \n", - "0.275 | \n", - "0.000 | \n", - "0.965 | \n", - "0.730 | \n", - "0.000 | \n", - "||||||||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.179 | \n", - "0.179 | \n", - "0.179 | \n", - "1.500 | \n", - "0.019 | \n", - "5.250 | \n", - "3.000 | \n", - "0.429 | \n", - "0.038 | \n", - "0.504 | \n", - "0.262 | \n", - "0.697 | \n", - "0.498 | \n", - "0.179 | \n", - "|||||||||||||||
no_synopsis | \n", - "0.179 | \n", - "0.143 | \n", - "0.179 | \n", - "2.250 | \n", - "0.030 | \n", - "6.071 | \n", - "5.179 | \n", - "0.536 | \n", - "0.036 | \n", - "0.474 | \n", - "0.117 | \n", - "0.694 | \n", - "0.528 | \n", - "0.571 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "0.393 | \n", - "0.393 | \n", - "0.393 | \n", - "2.821 | \n", - "0.045 | \n", - "5.786 | \n", - "4.857 | \n", - "0.750 | \n", - "0.055 | \n", - "0.389 | \n", - "0.073 | \n", - "0.681 | \n", - "0.613 | \n", - "0.071 | \n", - "||||||||||||||||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.071 | \n", - "0.071 | \n", - "0.071 | \n", - "0.893 | \n", - "0.008 | \n", - "8.536 | \n", - "2.679 | \n", - "0.321 | \n", - "0.017 | \n", - "0.652 | \n", - "0.376 | \n", - "0.833 | \n", - "0.349 | \n", - "0.214 | \n", - "|||||||||||||||
no_synopsis | \n", - "0.143 | \n", - "0.143 | \n", - "0.143 | \n", - "0.964 | \n", - "0.008 | \n", - "7.964 | \n", - "3.964 | \n", - "0.321 | \n", - "0.014 | \n", - "0.733 | \n", - "0.464 | \n", - "0.929 | \n", - "0.267 | \n", - "0.964 | \n", - "||||||||||||||||
ontological_synopsis | \n", - "0.250 | \n", - "0.143 | \n", - "0.250 | \n", - "2.500 | \n", - "0.024 | \n", - "10.571 | \n", - "7.429 | \n", - "0.536 | \n", - "0.028 | \n", - "0.643 | \n", - "0.216 | \n", - "1.000 | \n", - "0.357 | \n", - "0.679 | \n", + "N/A | \n", + "closure | \n", + "1.000 | \n", + "0.000 | \n", + "0.000 | \n", + "126.119 | \n", + "0.076 | \n", + "2422.119 | \n", + "2378.762 | \n", + "3.310 | \n", + "0.021 | \n", + "0.919 | \n", + "0.000 | \n", + "1.000 | \n", + "0.081 | \n", + "0.000 | \n", + "
random | \n", + "0.000 | \n", + "0.000 | \n", + "0.000 | \n", + "1.071 | \n", + "0.009 | \n", + "25.071 | \n", + "25.071 | \n", + "0.381 | \n", + "0.013 | \n", + "0.955 | \n", + "0.360 | \n", + "1.000 | \n", + "0.045 | \n", + "13.762 | \n", + "||||||||||||||||
rank_based | \n", + "0.048 | \n", + "0.000 | \n", + "0.000 | \n", + "2.571 | \n", + "0.017 | \n", + "26.095 | \n", + "26.095 | \n", + "0.405 | \n", + "0.018 | \n", + "0.917 | \n", + "0.241 | \n", + "1.000 | \n", + "0.084 | \n", + "2.167 | \n", + "||||||||||||||||
standard_no_ontology | \n", + "0.643 | \n", + "0.571 | \n", + "0.571 | \n", + "26.929 | \n", + "0.215 | \n", + "36.048 | \n", + "36.048 | \n", + "5.810 | \n", + "0.211 | \n", + "0.285 | \n", + "0.001 | \n", + "1.000 | \n", + "0.722 | \n", + "0.000 | \n", + "||||||||||||||||
gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.190 | \n", + "0.190 | \n", + "0.190 | \n", + "1.810 | \n", + "0.019 | \n", + "5.548 | \n", + "3.524 | \n", + "0.548 | \n", + "0.029 | \n", + "0.516 | \n", + "0.245 | \n", + "0.812 | \n", + "0.486 | \n", + "0.190 | \n", + "|||||||||||||||
no_synopsis | \n", + "0.214 | \n", + "0.214 | \n", + "0.214 | \n", + "2.095 | \n", + "0.025 | \n", + "4.881 | \n", + "4.071 | \n", + "0.690 | \n", + "0.044 | \n", + "0.473 | \n", + "0.147 | \n", + "0.855 | \n", + "0.530 | \n", + "0.214 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "0.452 | \n", + "0.429 | \n", + "0.452 | \n", + "2.738 | \n", + "0.033 | \n", + "5.857 | \n", + "4.762 | \n", + "0.929 | \n", + "0.071 | \n", + "0.389 | \n", + "0.097 | \n", + "0.739 | \n", + "0.613 | \n", + "0.095 | \n", + "||||||||||||||||
text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.095 | \n", + "0.095 | \n", + "0.095 | \n", + "1.357 | \n", + "0.013 | \n", + "9.548 | \n", + "3.167 | \n", + "0.381 | \n", + "0.022 | \n", + "0.581 | \n", + "0.344 | \n", + "0.830 | \n", + "0.421 | \n", + "0.262 | \n", + "|||||||||||||||
no_synopsis | \n", + "0.071 | \n", + "0.071 | \n", + "0.071 | \n", + "1.071 | \n", + "0.011 | \n", + "10.452 | \n", + "3.000 | \n", + "0.190 | \n", + "0.011 | \n", + "0.578 | \n", + "0.343 | \n", + "0.790 | \n", + "0.424 | \n", + "0.381 | \n", + "||||||||||||||||
ontological_synopsis | \n", + "0.286 | \n", + "0.143 | \n", + "0.238 | \n", + "2.024 | \n", + "0.020 | \n", + "11.548 | \n", + "7.190 | \n", + "0.738 | \n", + "0.037 | \n", + "0.671 | \n", + "0.270 | \n", + "0.951 | \n", + "0.330 | \n", + "0.214 | \n", "
\n", " | \n", - " | proportion significant | \n", - "num GO terms | \n", - "has top hit | \n", - "num novel | \n", + "proportion significant | \n", + "num GO terms | \n", + "has top hit | \n", + "num novel | \n", "||
---|---|---|---|---|---|---|---|---|---|---|---|
model | \n", @@ -4250,63 +4450,63 @@ "|||||||||||
gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "0.498 | \n", - "3.000 | \n", - "0.179 | \n", - "0.179 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "0.486 | \n", + "3.524 | \n", + "0.190 | \n", + "0.190 | \n", "
no_synopsis | \n", - "0.528 | \n", - "5.179 | \n", - "0.179 | \n", - "0.571 | \n", + "no_synopsis | \n", + "0.530 | \n", + "4.071 | \n", + "0.214 | \n", + "0.214 | \n", "||
ontological_synopsis | \n", - "0.613 | \n", - "4.857 | \n", - "0.393 | \n", - "0.071 | \n", + "ontological_synopsis | \n", + "0.613 | \n", + "4.762 | \n", + "0.452 | \n", + "0.095 | \n", "||
text-davinci-003 | \n", - "narrative_synopsis | \n", - "0.349 | \n", - "2.679 | \n", - "0.071 | \n", - "0.214 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", + "0.421 | \n", + "3.167 | \n", + "0.095 | \n", + "0.262 | \n", "
no_synopsis | \n", - "0.267 | \n", - "3.964 | \n", - "0.143 | \n", - "0.964 | \n", + "no_synopsis | \n", + "0.424 | \n", + "3.000 | \n", + "0.071 | \n", + "0.381 | \n", "||
ontological_synopsis | \n", - "0.357 | \n", - "7.429 | \n", - "0.250 | \n", - "0.679 | \n", + "ontological_synopsis | \n", + "0.330 | \n", + "7.190 | \n", + "0.286 | \n", + "0.214 | \n", "
11 rows × 16 columns
\n", "" ], "text/plain": [ - " model method has top hit in top 5 in top 10 \\\n", - "468 N/A standard True True True \n", - "469 N/A standard_no_ontology True False False \n", - "472 N/A None True False False \n", - "466 text-davinci-003 ontological_synopsis True True True \n", - "462 gpt-3.5-turbo no_synopsis False False False \n", - "463 gpt-3.5-turbo ontological_synopsis False False False \n", - "464 gpt-3.5-turbo narrative_synopsis False False False \n", - "465 text-davinci-003 no_synopsis False False False \n", - "467 text-davinci-003 narrative_synopsis False False False \n", - "470 N/A random False False False \n", - "471 N/A rank_based False False False \n", + " model method has top hit in top 5 \\\n", + "1436 N/A standard True True \n", + "1437 N/A standard_no_ontology True False \n", + "1440 N/A closure True False \n", + "1431 gpt-3.5-turbo ontological_synopsis True True \n", + "1430 gpt-3.5-turbo no_synopsis False False \n", + "... ... ... ... ... \n", + "1433 text-davinci-003 no_synopsis False False \n", + "1434 text-davinci-003 ontological_synopsis False False \n", + "1435 text-davinci-003 narrative_synopsis False False \n", + "1438 N/A random False False \n", + "1439 N/A rank_based False False \n", "\n", - " size overlap similarity num terms num GO terms nr size overlap \\\n", - "468 62 1.00 62 62 10 \n", - "469 15 0.22 21 21 7 \n", - "472 62 0.19 419 391 6 \n", - "466 3 0.04 10 9 0 \n", - "462 1 0.02 3 1 0 \n", - "463 1 0.02 5 1 0 \n", - "464 0 0.00 4 0 0 \n", - "465 0 0.00 9 2 0 \n", - "467 0 0.00 4 0 0 \n", - "470 0 0.00 8 8 0 \n", - "471 0 0.00 8 8 0 \n", + " in top 10 size overlap similarity num terms num GO terms \\\n", + "1436 True 62 1.00 62 62 \n", + "1437 False 15 0.22 21 21 \n", + "1440 False 62 0.19 419 391 \n", + "1431 True 4 0.06 6 4 \n", + "1430 False 2 0.03 6 3 \n", + "... ... ... ... ... ... \n", + "1433 False 0 0.00 6 0 \n", + "1434 False 0 0.00 1 0 \n", + "1435 False 0 0.00 5 1 \n", + "1438 False 0 0.00 8 8 \n", + "1439 False 0 0.00 8 8 \n", "\n", - " nr similarity mean p value min p value max p value \\\n", - "468 1.00 5.64e-03 1.98e-16 4.11e-02 \n", - "469 0.41 2.89e-01 1.98e-16 1.00e+00 \n", - "472 0.12 8.02e-01 1.98e-16 1.00e+00 \n", - "466 0.00 6.70e-01 1.98e-16 1.00e+00 \n", - "462 0.00 6.88e-15 6.88e-15 6.88e-15 \n", - "463 0.00 6.88e-15 6.88e-15 6.88e-15 \n", - "464 0.00 NaN NaN NaN \n", - "465 0.00 1.00e+00 1.00e+00 1.00e+00 \n", - "467 0.00 NaN NaN NaN \n", - "470 0.00 1.00e+00 1.00e+00 1.00e+00 \n", - "471 0.00 1.00e+00 1.00e+00 1.00e+00 \n", + " nr size overlap nr similarity mean p value min p value max p value \\\n", + "1436 10 1.00 5.64e-03 1.98e-16 4.11e-02 \n", + "1437 7 0.41 2.89e-01 1.98e-16 1.00e+00 \n", + "1440 7 0.13 8.02e-01 1.98e-16 1.00e+00 \n", + "1431 2 0.18 1.08e-04 1.98e-16 4.30e-04 \n", + "1430 1 0.09 3.33e-01 6.88e-15 1.00e+00 \n", + "... ... ... ... ... ... \n", + "1433 0 0.00 NaN NaN NaN \n", + "1434 0 0.00 NaN NaN NaN \n", + "1435 0 0.00 1.00e+00 1.00e+00 1.00e+00 \n", + "1438 0 0.00 1.00e+00 1.00e+00 1.00e+00 \n", + "1439 0 0.00 1.00e+00 1.00e+00 1.00e+00 \n", "\n", - " proportion significant num novel \n", - "468 1.00 0 \n", - "469 0.71 0 \n", - "472 0.20 0 \n", - "466 0.33 3 \n", - "462 1.00 0 \n", - "463 1.00 0 \n", - "464 NaN 0 \n", - "465 0.00 0 \n", - "467 NaN 0 \n", - "470 0.00 8 \n", - "471 0.00 1 " + " proportion significant num novel \n", + "1436 1.00 0 \n", + "1437 0.71 0 \n", + "1440 0.20 0 \n", + "1431 1.00 0 \n", + "1430 0.67 1 \n", + "... ... ... \n", + "1433 NaN 0 \n", + "1434 NaN 0 \n", + "1435 0.00 1 \n", + "1438 0.00 7 \n", + "1439 0.00 1 \n", + "\n", + "[11 rows x 16 columns]" ] }, - "execution_count": 52, + "execution_count": 34, "metadata": {}, "output_type": "execute_result" } @@ -4693,7 +4896,7 @@ }, { "cell_type": "code", - "execution_count": 53, + "execution_count": 35, "id": "149cb60b", "metadata": {}, "outputs": [ @@ -4723,14 +4926,13 @@ "97 rows × 12 columns
\n", + "" + ], + "text/plain": [ + " id label redundant \\\n", + "0 GO:0006625 protein targeting to peroxisome False \n", + "1 GO:0072663 establishment of protein localization to perox... True \n", + "2 GO:0072662 protein localization to peroxisome True \n", + "3 GO:0015919 peroxisomal membrane transport False \n", + "4 GO:0043574 peroxisomal transport True \n", + ".. ... ... ... \n", + "92 GO:0046872 metal ion binding False \n", + "93 GO:0016020 membrane False \n", + "94 GO:0070062 extracellular exosome False \n", + "95 GO:0005829 cytosol False \n", + "96 GO:0005737 cytoplasm False \n", + "\n", + " standard standard no ontology turbo ontological synopsis \\\n", + "0 0.0 10.0 4.0 \n", + "1 1.0 NaN NaN \n", + "2 2.0 NaN NaN \n", + "3 3.0 NaN NaN \n", + "4 4.0 NaN NaN \n", + ".. ... ... ... \n", + "92 NaN NaN NaN \n", + "93 NaN NaN NaN \n", + "94 NaN NaN NaN \n", + "95 NaN NaN NaN \n", + "96 NaN NaN NaN \n", + "\n", + " turbo no synopsis turbo narrative synopsis dav no synopsis \\\n", + "0 NaN NaN NaN \n", + "1 NaN NaN NaN \n", + "2 NaN NaN NaN \n", + "3 NaN NaN NaN \n", + "4 NaN NaN NaN \n", + ".. ... ... ... \n", + "92 NaN NaN NaN \n", + "93 NaN NaN NaN \n", + "94 NaN NaN NaN \n", + "95 NaN NaN NaN \n", + "96 NaN NaN NaN \n", + "\n", + " dav ontological synopsis dav narrative synopsis rank based \n", + "0 NaN NaN NaN \n", + "1 NaN NaN NaN \n", + "2 NaN NaN NaN \n", + "3 NaN NaN NaN \n", + "4 NaN NaN NaN \n", + ".. ... ... ... \n", + "92 NaN NaN 3.0 \n", + "93 NaN NaN 4.0 \n", + "94 NaN NaN 5.0 \n", + "95 NaN NaN 6.0 \n", + "96 NaN NaN 7.0 \n", + "\n", + "[97 rows x 12 columns]" + ] + }, + "execution_count": 35, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "# terms_summary(peroxisome).style.highlight_min(axis=1, props='font-weight:bold', numeric_only=True)\n", + "terms_summary(peroxisome)" + ] + }, + { + "cell_type": "markdown", + "id": "ccb68aa7", + "metadata": {}, + "source": [ + "## Sensory Ataxia" + ] + }, + { + "cell_type": "code", + "execution_count": 36, + "id": "8562caa4", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "\n", + " | model | \n", + "method | \n", + "has top hit | \n", + "in top 5 | \n", + "in top 10 | \n", + "size overlap | \n", + "similarity | \n", + "num terms | \n", + "num GO terms | \n", + "nr size overlap | \n", + "nr similarity | \n", + "mean p value | \n", + "min p value | \n", + "max p value | \n", + "proportion significant | \n", + "num novel | \n", "||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
15 | \n", - "GO:0006605 | \n", - "protein targeting | \n", + "1502 | \n", + "N/A | \n", + "standard | \n", "True | \n", - "15.0 | \n", - "NaN | \n", - "217.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "True | \n", + "True | \n", + "9 | \n", + "1.00e+00 | \n", + "9 | \n", + "9 | \n", + "3 | \n", + "1.00 | \n", + "1.25e-02 | \n", + "1.95e-05 | \n", + "4.26e-02 | \n", + "1.00 | \n", + "0 | \n", "|
16 | \n", - "GO:0001881 | \n", - "receptor recycling | \n", - "True | \n", - "16.0 | \n", - "NaN | \n", - "283.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "1503 | \n", + "N/A | \n", + "standard_no_ontology | \n", + "False | \n", + "False | \n", + "False | \n", + "3 | \n", + "3.00e-01 | \n", + "4 | \n", + "4 | \n", + "1 | \n", + "0.20 | \n", + "2.63e-01 | \n", + "3.13e-04 | \n", + "1.00e+00 | \n", + "0.75 | \n", + "0 | \n", "
17 | \n", - "GO:0072594 | \n", - "establishment of protein localization to organelle | \n", + "1497 | \n", + "gpt-3.5-turbo | \n", + "ontological_synopsis | \n", "True | \n", - "17.0 | \n", - "NaN | \n", - "234.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "True | \n", + "True | \n", + "2 | \n", + "2.22e-01 | \n", + "3 | \n", + "2 | \n", + "2 | \n", + "0.67 | \n", + "1.66e-04 | \n", + "1.95e-05 | \n", + "3.13e-04 | \n", + "1.00 | \n", + "0 | \n", "|
18 | \n", - "GO:0043112 | \n", - "receptor metabolic process | \n", + "1500 | \n", + "text-davinci-003 | \n", + "ontological_synopsis | \n", "True | \n", - "18.0 | \n", - "NaN | \n", - "285.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||||||||||
19 | \n", - "GO:0006886 | \n", - "intracellular protein transport | \n", - "True | \n", - "19.0 | \n", - "NaN | \n", - "220.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||||||||||||
20 | \n", - "GO:0033365 | \n", - "protein localization to organelle | \n", - "True | \n", - "20.0 | \n", - "NaN | \n", - "225.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||||||||||||
21 | \n", - "GO:0015031 | \n", - "protein transport | \n", - "True | \n", - "21.0 | \n", - "NaN | \n", - "223.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||||||||||||
22 | \n", - "GO:0045184 | \n", - "establishment of protein localization | \n", - "True | \n", - "22.0 | \n", - "NaN | \n", - "227.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "False | \n", + "False | \n", + "2 | \n", + "1.00e-01 | \n", + "17 | \n", + "13 | \n", + "2 | \n", + "0.18 | \n", + "8.48e-01 | \n", + "1.95e-05 | \n", + "1.00e+00 | \n", + "0.15 | \n", + "0 | \n", "||||
23 | \n", - "GO:0046907 | \n", - "intracellular transport | \n", + "1506 | \n", + "N/A | \n", + "closure | \n", "True | \n", - "23.0 | \n", - "NaN | \n", - "228.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||||||||||
24 | \n", - "GO:0140318 | \n", - "protein transporter activity | \n", "False | \n", - "24.0 | \n", - "11.0 | \n", - "265.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "False | \n", + "9 | \n", + "8.51e-03 | \n", + "1360 | \n", + "1314 | \n", + "0 | \n", + "0.00 | \n", + "9.89e-01 | \n", + "1.95e-05 | \n", + "1.00e+00 | \n", + "0.01 | \n", + "0 | \n", "|||||
25 | \n", - "GO:0071705 | \n", - "nitrogen compound transport | \n", - "True | \n", - "25.0 | \n", - "NaN | \n", - "232.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", + "... | \n", "
26 | \n", - "GO:0006635 | \n", - "fatty acid beta-oxidation | \n", + "1498 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", "False | \n", - "26.0 | \n", - "5.0 | \n", - "237.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||||||||||
27 | \n", - "GO:0051649 | \n", - "establishment of localization in cell | \n", - "True | \n", - "27.0 | \n", - "NaN | \n", - "230.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "False | \n", + "False | \n", + "0 | \n", + "0.00e+00 | \n", + "4 | \n", + "1 | \n", + "0 | \n", + "0.00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "0.00 | \n", + "0 | \n", "||||
28 | \n", - "GO:0044721 | \n", - "protein import into peroxisome matrix, substrate release | \n", - "True | \n", - "28.0 | \n", - "7.0 | \n", - "372.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "1499 | \n", + "text-davinci-003 | \n", + "no_synopsis | \n", + "False | \n", + "False | \n", + "False | \n", + "0 | \n", + "0.00e+00 | \n", + "17 | \n", + "9 | \n", + "0 | \n", + "0.00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "0.00 | \n", + "4 | \n", "
29 | \n", - "GO:0000268 | \n", - "peroxisome targeting sequence binding | \n", + "1501 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", "False | \n", - "29.0 | \n", - "NaN | \n", - "84.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "False | \n", + "False | \n", + "0 | \n", + "0.00e+00 | \n", + "6 | \n", + "2 | \n", + "0 | \n", + "0.00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "0.00 | \n", + "1 | \n", "|
30 | \n", - "GO:0043335 | \n", - "protein unfolding | \n", + "1504 | \n", + "N/A | \n", + "random | \n", "False | \n", - "30.0 | \n", - "6.0 | \n", - "367.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "False | \n", + "False | \n", + "0 | \n", + "0.00e+00 | \n", + "14 | \n", + "14 | \n", + "0 | \n", + "0.00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "0.00 | \n", + "7 | \n", "|
31 | \n", - "GO:0008104 | \n", - "protein localization | \n", - "True | \n", - "31.0 | \n", - "NaN | \n", - "212.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "1505 | \n", + "N/A | \n", + "rank_based | \n", + "False | \n", + "False | \n", + "False | \n", + "0 | \n", + "0.00e+00 | \n", + "15 | \n", + "15 | \n", + "0 | \n", + "0.00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "1.00e+00 | \n", + "0.00 | \n", + "0 | \n", + "
11 rows × 16 columns
\n", + "\n", + " | model | \n", + "method | \n", + "go term ids | \n", + "novel labels | \n", + "
---|---|---|---|---|
1502 | \n", + "N/A | \n", + "standard | \n", + "[GO:0042552, GO:0008366, GO:0007272, GO:0007422, GO:0014037, GO:0010001, GO:0032287, GO:0006264, GO:0042063] | \n", + "[] | \n", + "
1503 | \n", + "N/A | \n", + "standard_no_ontology | \n", + "[GO:0021680, GO:0032287, GO:0006264, GO:0007422] | \n", + "[] | \n", + "
1497 | \n", + "gpt-3.5-turbo | \n", + "ontological_synopsis | \n", + "[GO:0042552, GO:0007422] | \n", + "[] | \n", + "
1500 | \n", + "text-davinci-003 | \n", + "ontological_synopsis | \n", + "[GO:0007155, GO:0016567, GO:0050794, GO:0042981, GO:0006264, GO:0006839, GO:0015886, GO:0090304, GO:0034214, GO:0010595, GO:0002639, GO:0098743, GO:0042552] | \n", + "[] | \n", + "
1506 | \n", + "N/A | \n", + "closure | \n", + "[GO:0140018, GO:0008045, GO:0009612, GO:0006259, GO:0030534, GO:0075732, GO:0002639, GO:0006268, GO:0046872, GO:0003700, GO:0030218, GO:0043161, GO:0048168, GO:0032287, GO:0043139, GO:0008285, GO:0004860, GO:0051402, GO:0000978, GO:0031643, GO:0060170, GO:0018158, GO:1904390, GO:1901184, GO:0007028, GO:0003682, GO:0005261, GO:0071260, GO:0051603, GO:0014037, GO:0004347, GO:0021666, GO:0048029, GO:0006418, GO:0008033, GO:0004561, GO:0007599, GO:0061665, GO:0006915, GO:0061630, GO:0043005, GO:0008408, GO:0005654, GO:0007622, GO:0046686, GO:0006812, GO:0036494, GO:0030154, GO:0002196, GO:0003674, GO:0043657, GO:0021675, GO:0010595, GO:0008366, GO:0042982, GO:1903912, GO:0034285, GO:0006261, GO:0031410, GO:0006986, GO:0003220, GO:0035578, GO:0016485, GO:0010977, GO:0016887, GO:0034142, GO:0071310, GO:1990837, GO:0060323, GO:0005759, GO:0071897, GO:0016567, GO:1904389, GO:0071407, GO:0043524, GO:0060173, GO:0008270, GO:0005789, GO:0048704, GO:0032060, GO:0005829, GO:0055085, GO:0015232, GO:0019901, GO:0005975, GO:0042564, GO:0035640, GO:0007611, GO:0021665, GO:0007165, GO:0032288, GO:0035264, GO:0042474, GO:0005643, GO:0006801, GO:0043231, GO:0043154, GO:0042645, GO:0035284, GO:0001701, ...] | \n", + "[] | \n", + "
1496 | \n", + "gpt-3.5-turbo | \n", + "no_synopsis | \n", + "[GO:0031175, GO:0043209, GO:0005759] | \n", + "[] | \n", + "
1498 | \n", + "gpt-3.5-turbo | \n", + "narrative_synopsis | \n", + "[GO:0043209] | \n", + "[] | \n", + "
1499 | \n", + "text-davinci-003 | \n", + "no_synopsis | \n", + "[GO:0007399, GO:0006119, GO:0006626, GO:0051604, GO:0045056, GO:0016192, GO:0000902, GO:0007163, GO:0030182] | \n", + "[oxidative phosphorylation, protein targeting to mitochondrion, transcytosis, establishment or maintenance of cell polarity] | \n", + "
1501 | \n", + "text-davinci-003 | \n", + "narrative_synopsis | \n", + "[GO:0009117, GO:0007165] | \n", + "[nucleotide metabolic process] | \n", + "
1504 | \n", + "N/A | \n", + "random | \n", + "[GO:0021854, GO:0005654, GO:0007049, GO:0005737, GO:0005634, GO:0045087, GO:0071333, GO:0000139, GO:0033612, GO:0031982, GO:0019941, GO:0017018, GO:0000184, GO:0005743] | \n", + "[hypothalamus development, cell cycle, innate immune response, Golgi membrane, receptor serine/threonine kinase binding, myosin phosphatase activity, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay] | \n", + "
1505 | \n", + "N/A | \n", + "rank_based | \n", + "[GO:0070062, GO:0042802, GO:0005654, GO:0005576, GO:0005737, GO:0005886, GO:0005634, GO:0005739, GO:0005829, GO:0016020, GO:0005524, GO:0005615, GO:0003723, GO:0006357, GO:0046872] | \n", + "[] | \n", + "
\n", + " | id | \n", + "label | \n", + "redundant | \n", + "standard | \n", + "turbo ontological synopsis | \n", + "dav ontological synopsis | \n", + "standard no ontology | \n", + "turbo no synopsis | \n", + "turbo narrative synopsis | \n", + "dav no synopsis | \n", + "dav narrative synopsis | \n", + "rank based | \n", + "|||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | \n", + "GO:0042552 | \n", + "myelination | \n", + "False | \n", + "0.0 | \n", + "0.0 | \n", + "16.0 | \n", + "NaN | \n", + "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||||||
32 | \n", - "GO:0070727 | \n", - "cellular macromolecule localization | \n", + "1 | \n", + "GO:0008366 | \n", + "axon ensheathment | \n", "True | \n", - "32.0 | \n", + "1.0 | \n", "NaN | \n", - "216.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5263,13 +5755,12 @@ "NaN | \n", "|||||
33 | \n", - "GO:0045046 | \n", - "protein import into peroxisome membrane | \n", + "2 | \n", + "GO:0007272 | \n", + "ensheathment of neurons | \n", "True | \n", - "33.0 | \n", - "9.0 | \n", - "375.0 | \n", + "2.0 | \n", + "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5279,15 +5770,14 @@ "NaN | \n", "||||
34 | \n", - "GO:0000425 | \n", - "pexophagy | \n", + "3 | \n", + "GO:0007422 | \n", + "peripheral nervous system development | \n", "False | \n", - "34.0 | \n", - "8.0 | \n", - "90.0 | \n", - "NaN | \n", + "3.0 | \n", + "1.0 | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5295,13 +5785,12 @@ "NaN | \n", "|
35 | \n", - "GO:0019395 | \n", - "fatty acid oxidation | \n", + "4 | \n", + "GO:0014037 | \n", + "Schwann cell differentiation | \n", "True | \n", - "35.0 | \n", + "4.0 | \n", "NaN | \n", - "241.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5311,13 +5800,12 @@ "NaN | \n", "|||||
36 | \n", - "GO:0034440 | \n", - "lipid oxidation | \n", + "5 | \n", + "GO:0010001 | \n", + "glial cell differentiation | \n", "True | \n", - "36.0 | \n", + "5.0 | \n", "NaN | \n", - "243.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5327,15 +5815,14 @@ "NaN | \n", "|||||
37 | \n", - "GO:0098588 | \n", - "bounding membrane of organelle | \n", + "6 | \n", + "GO:0032287 | \n", + "peripheral nervous system myelin maintenance | \n", "True | \n", - "37.0 | \n", - "NaN | \n", - "194.0 | \n", + "6.0 | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5343,15 +5830,14 @@ "NaN | \n", "||
38 | \n", - "GO:0009062 | \n", - "fatty acid catabolic process | \n", - "True | \n", - "38.0 | \n", - "NaN | \n", - "238.0 | \n", - "NaN | \n", + "7 | \n", + "GO:0006264 | \n", + "mitochondrial DNA replication | \n", + "False | \n", + "7.0 | \n", "NaN | \n", + "6.0 | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5359,13 +5845,12 @@ "NaN | \n", "
39 | \n", - "GO:0071702 | \n", - "organic substance transport | \n", + "8 | \n", + "GO:0042063 | \n", + "gliogenesis | \n", "True | \n", - "39.0 | \n", + "8.0 | \n", "NaN | \n", - "231.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5375,15 +5860,14 @@ "NaN | \n", "|||||
40 | \n", - "GO:0033036 | \n", - "macromolecule localization | \n", - "True | \n", - "40.0 | \n", + "9 | \n", + "GO:0021680 | \n", + "cerebellar Purkinje cell layer development | \n", + "False | \n", "NaN | \n", - "213.0 | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5391,13 +5875,12 @@ "NaN | \n", "||
41 | \n", - "GO:0030242 | \n", - "autophagy of peroxisome | \n", - "True | \n", - "41.0 | \n", + "10 | \n", + "nerve impulse transmission | \n", + "None | \n", + "False | \n", "NaN | \n", - "94.0 | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5407,14 +5890,13 @@ "NaN | \n", "||||
42 | \n", - "GO:0072329 | \n", - "monocarboxylic acid catabolic process | \n", - "True | \n", - "42.0 | \n", + "11 | \n", + "GO:0007155 | \n", + "cell adhesion | \n", + "False | \n", "NaN | \n", - "247.0 | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5423,14 +5905,13 @@ "NaN | \n", "|||
43 | \n", - "GO:0051641 | \n", - "cellular localization | \n", - "True | \n", - "43.0 | \n", + "12 | \n", + "GO:0016567 | \n", + "protein ubiquitination | \n", + "False | \n", "NaN | \n", - "215.0 | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5439,14 +5920,13 @@ "NaN | \n", "|||
44 | \n", - "GO:0055085 | \n", - "transmembrane transport | \n", - "True | \n", - "44.0 | \n", + "13 | \n", + "neuronal development | \n", + "None | \n", + "False | \n", "NaN | \n", - "259.0 | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5455,15 +5935,14 @@ "NaN | \n", "|||
45 | \n", - "GO:0140036 | \n", - "ubiquitin-dependent protein binding | \n", + "14 | \n", + "GO:0050794 | \n", + "regulation of cellular process | \n", "False | \n", - "45.0 | \n", - "12.0 | \n", - "411.0 | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", + "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5471,14 +5950,13 @@ "NaN | \n", "||
46 | \n", - "GO:0006996 | \n", - "organelle organization | \n", - "True | \n", - "46.0 | \n", + "15 | \n", + "GO:0042981 | \n", + "regulation of apoptotic process | \n", + "False | \n", "NaN | \n", - "221.0 | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5487,14 +5965,13 @@ "NaN | \n", "|||
47 | \n", - "GO:0140035 | \n", - "ubiquitination-like modification-dependent protein binding | \n", - "True | \n", - "47.0 | \n", + "16 | \n", + "regulation of endoplasmic reticulum stress | \n", + "None | \n", + "False | \n", "NaN | \n", - "410.0 | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5503,14 +5980,13 @@ "NaN | \n", "|||
48 | \n", - "GO:0030258 | \n", - "lipid modification | \n", - "True | \n", - "48.0 | \n", + "17 | \n", + "GO:0006839 | \n", + "mitochondrial transport | \n", + "False | \n", "NaN | \n", - "242.0 | \n", "NaN | \n", + "7.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5519,14 +5995,13 @@ "NaN | \n", "|||
49 | \n", - "GO:0044242 | \n", - "cellular lipid catabolic process | \n", - "True | \n", - "49.0 | \n", + "18 | \n", + "GO:0015886 | \n", + "heme transport | \n", + "False | \n", "NaN | \n", - "244.0 | \n", "NaN | \n", + "8.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5535,14 +6010,13 @@ "NaN | \n", "|||
50 | \n", - "GO:0046395 | \n", - "carboxylic acid catabolic process | \n", - "True | \n", - "50.0 | \n", + "19 | \n", + "GO:0090304 | \n", + "nucleic acid metabolic process | \n", + "False | \n", "NaN | \n", - "246.0 | \n", "NaN | \n", + "9.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5551,14 +6025,13 @@ "NaN | \n", "|||
51 | \n", - "GO:0016054 | \n", - "organic acid catabolic process | \n", - "True | \n", - "51.0 | \n", + "20 | \n", + "GO:0034214 | \n", + "protein hexamerization | \n", + "False | \n", "NaN | \n", - "240.0 | \n", "NaN | \n", + "10.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5567,15 +6040,14 @@ "NaN | \n", "|||
52 | \n", - "GO:0000038 | \n", - "very long-chain fatty acid metabolic process | \n", + "21 | \n", + "glucose-6-phosphate metabolic process | \n", + "None | \n", "False | \n", - "52.0 | \n", - "13.0 | \n", - "69.0 | \n", "NaN | \n", "NaN | \n", + "11.0 | \n", + "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5583,14 +6055,13 @@ "NaN | \n", "||
53 | \n", - "GO:0031090 | \n", - "organelle membrane | \n", - "True | \n", - "53.0 | \n", + "22 | \n", + "GO:0010595 | \n", + "positive regulation of endothelial cell migration | \n", + "False | \n", "NaN | \n", - "192.0 | \n", "NaN | \n", + "12.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5599,14 +6070,13 @@ "NaN | \n", "|||
54 | \n", - "GO:0006810 | \n", - "transport | \n", - "True | \n", - "54.0 | \n", + "23 | \n", + "GO:0002639 | \n", + "positive regulation of immunoglobulin production | \n", + "False | \n", "NaN | \n", - "219.0 | \n", "NaN | \n", + "13.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5615,14 +6085,13 @@ "NaN | \n", "|||
55 | \n", - "GO:0016042 | \n", - "lipid catabolic process | \n", - "True | \n", - "55.0 | \n", + "24 | \n", + "positive regulation of transcription | \n", + "None | \n", + "False | \n", "NaN | \n", - "239.0 | \n", "NaN | \n", + "14.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5631,14 +6100,13 @@ "NaN | \n", "|||
56 | \n", - "GO:0051234 | \n", - "establishment of localization | \n", - "True | \n", - "56.0 | \n", + "25 | \n", + "GO:0098743 | \n", + "cell aggregation | \n", + "False | \n", "NaN | \n", - "229.0 | \n", "NaN | \n", + "15.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -5647,893 +6115,1247 @@ "NaN | \n", "|||
57 | \n", - "GO:0006631 | \n", - "fatty acid metabolic process | \n", - "True | \n", - "57.0 | \n", + "26 | \n", + "GO:0031175 | \n", + "neuron projection development | \n", + "False | \n", + "NaN | \n", "NaN | \n", - "72.0 | \n", - "8.0 | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "
58 | \n", - "GO:0005048 | \n", - "signal sequence binding | \n", - "True | \n", - "58.0 | \n", - "NaN | \n", - "86.0 | \n", + "27 | \n", + "GO:0043209 | \n", + "myelin sheath | \n", + "False | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "
59 | \n", - "GO:0005782 | \n", - "peroxisomal matrix | \n", - "True | \n", - "59.0 | \n", - "15.0 | \n", - "195.0 | \n", + "28 | \n", + "GO:0005759 | \n", + "mitochondrial matrix | \n", + "False | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", + "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "
60 | \n", - "GO:0031907 | \n", - "microbody lumen | \n", - "True | \n", - "60.0 | \n", + "29 | \n", + "mitochondrial respiratory chain complex | \n", + "None | \n", + "False | \n", "NaN | \n", - "196.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|
61 | \n", - "GO:0044282 | \n", - "small molecule catabolic process | \n", - "True | \n", - "61.0 | \n", + "30 | \n", + "mitochondrial metabolism | \n", + "None | \n", + "False | \n", "NaN | \n", - "245.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|
62 | \n", - "GO:0034614 | \n", - "cellular response to reactive oxygen species | \n", + "31 | \n", + "MONDO:0015626 | \n", + "None | \n", "False | \n", "NaN | \n", - "14.0 | \n", - "345.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||
63 | \n", - "GO:0001764 | \n", - "neuron migration | \n", + "32 | \n", + "MONDO:0007790 | \n", + "None | \n", "False | \n", "NaN | \n", - "16.0 | \n", - "146.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||
64 | \n", - "GO:0033328 | \n", - "peroxisome membrane targeting sequence binding | \n", + "33 | \n", + "MONDO:0005244 | \n", + "None | \n", "False | \n", "NaN | \n", - "17.0 | \n", - "339.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||
65 | \n", - "GO:0032994 | \n", - "protein-lipid complex | \n", + "34 | \n", + "membrane trafficking | \n", + "None | \n", "False | \n", "NaN | \n", - "18.0 | \n", - "338.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "||
66 | \n", - "GO:0005052 | \n", - "peroxisome matrix targeting signal-1 binding | \n", + "35 | \n", + "synthesis of proteins | \n", + "None | \n", "False | \n", "NaN | \n", - "19.0 | \n", - "160.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "||
67 | \n", - "GO:0060152 | \n", - "microtubule-based peroxisome localization | \n", + "36 | \n", + "GO:0007399 | \n", + "nervous system development | \n", "False | \n", "NaN | \n", - "20.0 | \n", - "393.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "||
68 | \n", - "GO:0005053 | \n", - "peroxisome matrix targeting signal-2 binding | \n", + "37 | \n", + "GO:0006119 | \n", + "oxidative phosphorylation | \n", "False | \n", "NaN | \n", "NaN | \n", - "161.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "||
69 | \n", - "GO:0005829 | \n", - "cytosol | \n", + "38 | \n", + "GO:0006626 | \n", + "protein targeting to mitochondrion | \n", "False | \n", "NaN | \n", "NaN | \n", - "200.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "0.0 | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "||
70 | \n", - "GO:0032991 | \n", - "protein-containing complex | \n", + "39 | \n", + "GO:0051604 | \n", + "protein maturation | \n", "False | \n", "NaN | \n", "NaN | \n", - "289.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "NaN | \n", "||
71 | \n", - "GO:0050680 | \n", - "negative regulation of epithelial cell proliferation | \n", + "40 | \n", + "protein processing in endoplasmic reticulum | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "385.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "6.0 | \n", "NaN | \n", "NaN | \n", "||
72 | \n", - "GO:0031648 | \n", - "protein destabilization | \n", + "41 | \n", + "regulation of actin cytoskeleton | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "336.0 | \n", - "7.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "7.0 | \n", "NaN | \n", "NaN | \n", "||
73 | \n", - "GO:0019899 | \n", - "enzyme binding | \n", + "42 | \n", + "structural constituent of axon | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "307.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "8.0 | \n", "NaN | \n", "NaN | \n", "||
74 | \n", - "GO:0008611 | \n", - "ether lipid biosynthetic process | \n", + "43 | \n", + "axonal transport of mitochondrial protein | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "268.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "9.0 | \n", "NaN | \n", "NaN | \n", "||
75 | \n", - "GO:0048468 | \n", - "cell development | \n", + "44 | \n", + "GO:0045056 | \n", + "transcytosis | \n", "False | \n", "NaN | \n", "NaN | \n", - "383.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "10.0 | \n", "NaN | \n", "NaN | \n", "||
76 | \n", - "GO:0070062 | \n", - "extracellular exosome | \n", + "45 | \n", + "translocation of proteins | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "407.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "4.0 | \n", "NaN | \n", + "11.0 | \n", "NaN | \n", "NaN | \n", "||
77 | \n", - "GO:0044183 | \n", - "protein folding chaperone | \n", + "46 | \n", + "GO:0016192 | \n", + "vesicle-mediated transport | \n", "False | \n", "NaN | \n", "NaN | \n", - "368.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "12.0 | \n", "NaN | \n", "NaN | \n", "||
78 | \n", - "GO:0040018 | \n", - "positive regulation of multicellular organism growth | \n", + "47 | \n", + "GO:0000902 | \n", + "cell morphogenesis | \n", "False | \n", "NaN | \n", "NaN | \n", - "355.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "13.0 | \n", "NaN | \n", "NaN | \n", "||
79 | \n", - "GO:0140597 | \n", - "protein carrier chaperone | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "413.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
80 | \n", - "GO:0030674 | \n", - "protein-macromolecule adaptor activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "321.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
81 | \n", - "GO:0016561 | \n", - "protein import into peroxisome matrix, translocation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "282.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
82 | \n", - "GO:0005654 | \n", - "nucleoplasm | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "185.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
83 | \n", - "GO:0005737 | \n", - "cytoplasm | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "186.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
84 | \n", - "GO:0050821 | \n", - "protein stabilization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "386.0 | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
85 | \n", - "GO:0008289 | \n", - "lipid binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "258.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||||
86 | \n", - "GO:0021795 | \n", - "cerebral cortex cell migration | \n", + "48 | \n", + "GO:0007163 | \n", + "establishment or maintenance of cell polarity | \n", "False | \n", "NaN | \n", "NaN | \n", - "315.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "14.0 | \n", "NaN | \n", "NaN | \n", "||
87 | \n", - "GO:0031333 | \n", - "negative regulation of protein-containing complex assembly | \n", + "49 | \n", + "nervous system morphogenesis | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "325.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "15.0 | \n", "NaN | \n", "NaN | \n", "||
88 | \n", - "GO:0001958 | \n", - "endochondral ossification | \n", + "50 | \n", + "GO:0030182 | \n", + "neuron differentiation | \n", "False | \n", "NaN | \n", "NaN | \n", - "158.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "16.0 | \n", "NaN | \n", "NaN | \n", "||
89 | \n", - "GO:0016560 | \n", - "protein import into peroxisome matrix, docking | \n", + "51 | \n", + "neurodevelopment | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "281.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "||
90 | \n", - "GO:0005524 | \n", - "ATP binding | \n", + "52 | \n", + "nerve damage | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "163.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "||
91 | \n", - "GO:0061630 | \n", - "ubiquitin protein ligase activity | \n", + "53 | \n", + "MESH:M0352612 | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "399.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "||
92 | \n", - "GO:0016887 | \n", - "ATP hydrolysis activity | \n", + "54 | \n", + "GO:0009117 | \n", + "nucleotide metabolic process | \n", "False | \n", "NaN | \n", "NaN | \n", - "304.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "||
93 | \n", - "GO:0007006 | \n", - "mitochondrial membrane organization | \n", + "55 | \n", + "mitochondrial function | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "250.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "||
94 | \n", - "GO:0008270 | \n", - "zinc ion binding | \n", + "56 | \n", + "GO:0007165 | \n", + "signal transduction | \n", "False | \n", "NaN | \n", "NaN | \n", - "254.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "||
95 | \n", - "GO:0097733 | \n", - "photoreceptor cell cilium | \n", + "57 | \n", + "GO:0070062 | \n", + "extracellular exosome | \n", "False | \n", "NaN | \n", "NaN | \n", - "128.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "||
96 | \n", - "GO:0007029 | \n", - "endoplasmic reticulum organization | \n", + "58 | \n", + "GO:0042802 | \n", + "identical protein binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "253.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "||
97 | \n", - "GO:0005783 | \n", - "endoplasmic reticulum | \n", + "59 | \n", + "GO:0005654 | \n", + "nucleoplasm | \n", "False | \n", "NaN | \n", "NaN | \n", - "198.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "||
98 | \n", - "GO:1990928 | \n", - "response to amino acid starvation | \n", + "60 | \n", + "GO:0005576 | \n", + "extracellular region | \n", "False | \n", "NaN | \n", "NaN | \n", - "418.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "||
99 | \n", - "GO:0042803 | \n", - "protein homodimerization activity | \n", + "61 | \n", + "GO:0005737 | \n", + "cytoplasm | \n", "False | \n", "NaN | \n", "NaN | \n", - "365.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "||
100 | \n", - "GO:0016593 | \n", - "Cdc73/Paf1 complex | \n", + "62 | \n", + "GO:0005886 | \n", + "plasma membrane | \n", "False | \n", "NaN | \n", "NaN | \n", - "297.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "||
101 | \n", - "GO:0048147 | \n", - "negative regulation of fibroblast proliferation | \n", + "63 | \n", + "GO:0005634 | \n", + "nucleus | \n", "False | \n", "NaN | \n", "NaN | \n", - "382.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "6.0 | \n", "||
102 | \n", - "GO:0044877 | \n", - "protein-containing complex binding | \n", + "64 | \n", + "GO:0005739 | \n", + "mitochondrion | \n", "False | \n", "NaN | \n", "NaN | \n", - "373.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "7.0 | \n", "||
103 | \n", - "GO:0008320 | \n", - "protein transmembrane transporter activity | \n", + "65 | \n", + "GO:0005829 | \n", + "cytosol | \n", "False | \n", "NaN | \n", "NaN | \n", - "262.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "8.0 | \n", "||
104 | \n", - "GO:0005739 | \n", - "mitochondrion | \n", + "66 | \n", + "GO:0016020 | \n", + "membrane | \n", "False | \n", "NaN | \n", "NaN | \n", - "187.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "9.0 | \n", "||
105 | \n", - "GO:0005794 | \n", - "Golgi apparatus | \n", + "67 | \n", + "GO:0005524 | \n", + "ATP binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "199.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "10.0 | \n", "||
106 | \n", - "GO:0001750 | \n", - "photoreceptor outer segment | \n", + "68 | \n", + "GO:0005615 | \n", + "extracellular space | \n", "False | \n", "NaN | \n", "NaN | \n", - "135.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "11.0 | \n", "||
107 | \n", - "GO:0016020 | \n", - "membrane | \n", + "69 | \n", + "GO:0003723 | \n", + "RNA binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "191.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "7.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "12.0 | \n", "||
108 | \n", - "GO:0006513 | \n", - "protein monoubiquitination | \n", + "70 | \n", + "GO:0006357 | \n", + "regulation of transcription by RNA polymerase II | \n", "False | \n", "NaN | \n", "NaN | \n", - "202.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "13.0 | \n", "||
109 | \n", - "GO:0006457 | \n", - "protein folding | \n", + "71 | \n", + "GO:0046872 | \n", + "metal ion binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "201.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "14.0 | \n", "||
110 | \n", - "GO:0021895 | \n", - "cerebral cortex neuron differentiation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "318.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", + "
\n", + " | id | \n", + "label | \n", + "redundant | \n", + "standard | \n", + "standard no ontology | \n", + "turbo ontological synopsis | \n", + "turbo no synopsis | \n", + "turbo narrative synopsis | \n", + "dav narrative synopsis | \n", + "dav no synopsis | \n", + "rank based | \n", + "dav ontological synopsis | \n", "||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
111 | \n", - "GO:0050905 | \n", - "neuromuscular process | \n", + "0 | \n", + "GO:0006907 | \n", + "pinocytosis | \n", "False | \n", + "0.0 | \n", + "1.0 | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", - "389.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "||||
1 | \n", + "GO:0006897 | \n", + "endocytosis | \n", + "True | \n", + "1.0 | \n", + "6.0 | \n", + "0.0 | \n", + "0.0 | \n", + "0.0 | \n", + "20.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||||||||
112 | \n", - "GO:0031267 | \n", - "small GTPase binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "323.0 | \n", + "2 | \n", + "GO:0044351 | \n", + "macropinocytosis | \n", + "True | \n", + "2.0 | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6543,13 +7365,12 @@ "NaN | \n", "||||
113 | \n", - "BFO:0000003 | \n", - "occurrent | \n", - "False | \n", - "NaN | \n", + "3 | \n", + "GO:0016192 | \n", + "vesicle-mediated transport | \n", + "True | \n", + "3.0 | \n", "NaN | \n", - "67.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6559,14 +7380,13 @@ "NaN | \n", "|||||
114 | \n", - "BFO:0000015 | \n", - "process | \n", + "4 | \n", + "GO:0030100 | \n", + "regulation of endocytosis | \n", "False | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", - "68.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6575,13 +7395,12 @@ "NaN | \n", "|||||
115 | \n", - "GO:0006082 | \n", - "organic acid metabolic process | \n", - "False | \n", - "NaN | \n", + "5 | \n", + "GO:0006810 | \n", + "transport | \n", + "True | \n", + "5.0 | \n", "NaN | \n", - "70.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6591,29 +7410,27 @@ "NaN | \n", "|||||
116 | \n", - "GO:0006629 | \n", - "lipid metabolic process | \n", - "False | \n", + "6 | \n", + "GO:0051234 | \n", + "establishment of localization | \n", + "True | \n", + "6.0 | \n", "NaN | \n", "NaN | \n", - "71.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "1.0 | \n", "NaN | \n", "NaN | \n", "||
117 | \n", - "GO:0008150 | \n", - "biological_process | \n", - "False | \n", - "NaN | \n", + "7 | \n", + "GO:0045807 | \n", + "positive regulation of endocytosis | \n", + "True | \n", + "7.0 | \n", "NaN | \n", - "73.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6623,13 +7440,12 @@ "NaN | \n", "|||||
118 | \n", - "GO:0008152 | \n", - "metabolic process | \n", - "False | \n", - "NaN | \n", + "8 | \n", + "GO:0060627 | \n", + "regulation of vesicle-mediated transport | \n", + "True | \n", + "8.0 | \n", "NaN | \n", - "74.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6639,13 +7455,12 @@ "NaN | \n", "|||||
119 | \n", - "GO:0009987 | \n", - "cellular process | \n", - "False | \n", - "NaN | \n", + "9 | \n", + "GO:0051179 | \n", + "localization | \n", + "True | \n", + "9.0 | \n", "NaN | \n", - "75.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6655,14 +7470,13 @@ "NaN | \n", "|||||
120 | \n", - "GO:0019752 | \n", - "carboxylic acid metabolic process | \n", + "10 | \n", + "GO:0031410 | \n", + "cytoplasmic vesicle | \n", "False | \n", + "10.0 | \n", "NaN | \n", "NaN | \n", - "76.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6671,13 +7485,12 @@ "NaN | \n", "|||||
121 | \n", - "GO:0032787 | \n", - "monocarboxylic acid metabolic process | \n", - "False | \n", - "NaN | \n", + "11 | \n", + "GO:0097708 | \n", + "intracellular vesicle | \n", + "True | \n", + "11.0 | \n", "NaN | \n", - "77.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6687,13 +7500,12 @@ "NaN | \n", "|||||
122 | \n", - "GO:0043436 | \n", - "oxoacid metabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "78.0 | \n", + "12 | \n", + "GO:0050766 | \n", + "positive regulation of phagocytosis | \n", + "True | \n", + "12.0 | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6703,13 +7515,12 @@ "NaN | \n", "||||
123 | \n", - "GO:0044237 | \n", - "cellular metabolic process | \n", - "False | \n", - "NaN | \n", + "13 | \n", + "GO:0048518 | \n", + "positive regulation of biological process | \n", + "True | \n", + "13.0 | \n", "NaN | \n", - "79.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6719,13 +7530,12 @@ "NaN | \n", "|||||
124 | \n", - "GO:0044238 | \n", - "primary metabolic process | \n", - "False | \n", - "NaN | \n", + "14 | \n", + "GO:0050764 | \n", + "regulation of phagocytosis | \n", + "True | \n", + "14.0 | \n", "NaN | \n", - "80.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6735,13 +7545,12 @@ "NaN | \n", "|||||
125 | \n", - "GO:0044255 | \n", - "cellular lipid metabolic process | \n", - "False | \n", - "NaN | \n", + "15 | \n", + "GO:0051128 | \n", + "regulation of cellular component organization | \n", + "True | \n", + "15.0 | \n", "NaN | \n", - "81.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6751,13 +7560,12 @@ "NaN | \n", "|||||
126 | \n", - "GO:0044281 | \n", - "small molecule metabolic process | \n", - "False | \n", - "NaN | \n", + "16 | \n", + "GO:0031982 | \n", + "vesicle | \n", + "True | \n", + "16.0 | \n", "NaN | \n", - "82.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6767,13 +7575,12 @@ "NaN | \n", "|||||
127 | \n", - "GO:0071704 | \n", - "organic substance metabolic process | \n", + "17 | \n", + "GO:0150094 | \n", + "amyloid-beta clearance by cellular catabolic process | \n", "False | \n", - "NaN | \n", - "NaN | \n", - "83.0 | \n", + "17.0 | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6783,13 +7590,12 @@ "NaN | \n", "|||||
128 | \n", - "GO:0003674 | \n", - "molecular_function | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "85.0 | \n", + "18 | \n", + "GO:0006909 | \n", + "phagocytosis | \n", + "True | \n", + "18.0 | \n", + "17.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6799,13 +7605,12 @@ "NaN | \n", "||||
129 | \n", - "GO:0005488 | \n", - "binding | \n", - "False | \n", - "NaN | \n", + "19 | \n", + "GO:0051049 | \n", + "regulation of transport | \n", + "True | \n", + "19.0 | \n", "NaN | \n", - "87.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6815,15 +7620,14 @@ "NaN | \n", "|||||
130 | \n", - "GO:0033218 | \n", - "amide binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "88.0 | \n", - "NaN | \n", - "NaN | \n", + "20 | \n", + "GO:0006898 | \n", + "receptor-mediated endocytosis | \n", + "True | \n", + "20.0 | \n", + "2.0 | \n", + "4.0 | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6831,13 +7635,12 @@ "NaN | \n", "
131 | \n", - "GO:0042277 | \n", - "peptide binding | \n", - "False | \n", - "NaN | \n", + "21 | \n", + "GO:0051050 | \n", + "positive regulation of transport | \n", + "True | \n", + "21.0 | \n", "NaN | \n", - "89.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6847,13 +7650,12 @@ "NaN | \n", "|||||
132 | \n", - "GO:0006914 | \n", - "autophagy | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "91.0 | \n", + "22 | \n", + "GO:0005041 | \n", + "low-density lipoprotein particle receptor activity | \n", + "True | \n", + "22.0 | \n", + "5.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6863,13 +7665,12 @@ "NaN | \n", "||||
133 | \n", - "GO:0009056 | \n", - "catabolic process | \n", - "False | \n", - "NaN | \n", + "23 | \n", + "GO:0030139 | \n", + "endocytic vesicle | \n", + "True | \n", + "23.0 | \n", "NaN | \n", - "92.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6879,13 +7680,12 @@ "NaN | \n", "|||||
134 | \n", - "GO:0016236 | \n", - "macroautophagy | \n", - "False | \n", - "NaN | \n", + "24 | \n", + "GO:0030228 | \n", + "lipoprotein particle receptor activity | \n", + "True | \n", + "24.0 | \n", "NaN | \n", - "93.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6895,13 +7695,12 @@ "NaN | \n", "|||||
135 | \n", - "GO:0044248 | \n", - "cellular catabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "95.0 | \n", + "25 | \n", + "GO:0030666 | \n", + "endocytic vesicle membrane | \n", + "True | \n", + "25.0 | \n", + "18.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6911,13 +7710,12 @@ "NaN | \n", "||||
136 | \n", - "GO:0061912 | \n", - "selective autophagy | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "96.0 | \n", + "26 | \n", + "GO:0097242 | \n", + "amyloid-beta clearance | \n", + "True | \n", + "26.0 | \n", + "22.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6927,13 +7725,12 @@ "NaN | \n", "||||
137 | \n", - "GO:0061919 | \n", - "process utilizing autophagic mechanism | \n", - "False | \n", - "NaN | \n", + "27 | \n", + "GO:0051130 | \n", + "positive regulation of cellular component organization | \n", + "True | \n", + "27.0 | \n", "NaN | \n", - "97.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6943,13 +7740,12 @@ "NaN | \n", "|||||
138 | \n", - "BFO:0000002 | \n", - "continuant | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "98.0 | \n", + "28 | \n", + "GO:0060907 | \n", + "positive regulation of macrophage cytokine production | \n", + "True | \n", + "28.0 | \n", + "8.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6959,13 +7755,12 @@ "NaN | \n", "||||
139 | \n", - "BFO:0000004 | \n", - "independent continuant | \n", - "False | \n", - "NaN | \n", + "29 | \n", + "GO:0032879 | \n", + "regulation of localization | \n", + "True | \n", + "29.0 | \n", "NaN | \n", - "99.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6975,13 +7770,12 @@ "NaN | \n", "|||||
140 | \n", - "BFO:0000040 | \n", - "material entity | \n", - "False | \n", - "NaN | \n", + "30 | \n", + "GO:0048522 | \n", + "positive regulation of cellular process | \n", + "True | \n", + "30.0 | \n", "NaN | \n", - "100.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -6991,13 +7785,12 @@ "NaN | \n", "|||||
141 | \n", - "CARO:0000000 | \n", - "anatomical entity | \n", + "31 | \n", + "GO:0002277 | \n", + "myeloid dendritic cell activation involved in immune response | \n", "False | \n", - "NaN | \n", - "NaN | \n", - "101.0 | \n", + "31.0 | \n", + "9.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7007,13 +7800,12 @@ "NaN | \n", "|||||
142 | \n", - "CARO:0000003 | \n", - "connected anatomical structure | \n", - "False | \n", - "NaN | \n", + "32 | \n", + "GO:0030659 | \n", + "cytoplasmic vesicle membrane | \n", + "True | \n", + "32.0 | \n", "NaN | \n", - "102.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7023,13 +7815,12 @@ "NaN | \n", "|||||
143 | \n", - "CARO:0000006 | \n", - "material anatomical entity | \n", - "False | \n", - "NaN | \n", + "33 | \n", + "GO:0012506 | \n", + "vesicle membrane | \n", + "True | \n", + "33.0 | \n", "NaN | \n", - "103.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7039,13 +7830,12 @@ "NaN | \n", "|||||
144 | \n", - "CARO:0030000 | \n", - "biological entity | \n", - "False | \n", - "NaN | \n", + "34 | \n", + "GO:0061081 | \n", + "positive regulation of myeloid leukocyte cytokine production involved in immune response | \n", + "True | \n", + "34.0 | \n", "NaN | \n", - "104.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7055,13 +7845,12 @@ "NaN | \n", "|||||
145 | \n", - "CL:0000000 | \n", - "cell | \n", - "False | \n", - "NaN | \n", + "35 | \n", + "GO:0010935 | \n", + "regulation of macrophage cytokine production | \n", + "True | \n", + "35.0 | \n", "NaN | \n", - "105.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7071,14 +7860,13 @@ "NaN | \n", "|||||
146 | \n", - "CL:0000003 | \n", - "native cell | \n", + "36 | \n", + "GO:0048583 | \n", + "regulation of response to stimulus | \n", "False | \n", + "36.0 | \n", "NaN | \n", "NaN | \n", - "106.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7087,13 +7875,12 @@ "NaN | \n", "|||||
147 | \n", - "CL:0000006 | \n", - "neuronal receptor cell | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "107.0 | \n", + "37 | \n", + "GO:1905167 | \n", + "positive regulation of lysosomal protein catabolic process | \n", + "True | \n", + "37.0 | \n", + "10.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7103,13 +7890,12 @@ "NaN | \n", "||||
148 | \n", - "CL:0000101 | \n", - "sensory neuron | \n", - "False | \n", - "NaN | \n", + "38 | \n", + "GO:0009894 | \n", + "regulation of catabolic process | \n", + "True | \n", + "38.0 | \n", "NaN | \n", - "108.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7119,14 +7905,13 @@ "NaN | \n", "|||||
149 | \n", - "CL:0000197 | \n", - "sensory receptor cell | \n", + "39 | \n", + "GO:0023051 | \n", + "regulation of signaling | \n", "False | \n", + "39.0 | \n", "NaN | \n", "NaN | \n", - "109.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7135,13 +7920,12 @@ "NaN | \n", "|||||
150 | \n", - "CL:0000210 | \n", - "photoreceptor cell | \n", - "False | \n", - "NaN | \n", + "40 | \n", + "GO:0051641 | \n", + "cellular localization | \n", + "True | \n", + "40.0 | \n", "NaN | \n", - "110.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7151,13 +7935,12 @@ "NaN | \n", "|||||
151 | \n", - "CL:0000211 | \n", - "electrically active cell | \n", - "False | \n", - "NaN | \n", + "41 | \n", + "GO:1904352 | \n", + "positive regulation of protein catabolic process in the vacuole | \n", + "True | \n", + "41.0 | \n", "NaN | \n", - "111.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7167,13 +7950,12 @@ "NaN | \n", "|||||
152 | \n", - "CL:0000255 | \n", - "eukaryotic cell | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "112.0 | \n", + "42 | \n", + "GO:0070508 | \n", + "cholesterol import | \n", + "True | \n", + "42.0 | \n", + "13.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7183,13 +7965,12 @@ "NaN | \n", "||||
153 | \n", - "CL:0000393 | \n", - "electrically responsive cell | \n", - "False | \n", - "NaN | \n", + "43 | \n", + "GO:0031347 | \n", + "regulation of defense response | \n", + "True | \n", + "43.0 | \n", "NaN | \n", - "113.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7199,13 +7980,12 @@ "NaN | \n", "|||||
154 | \n", - "CL:0000404 | \n", - "electrically signaling cell | \n", + "44 | \n", + "GO:0005794 | \n", + "Golgi apparatus | \n", "False | \n", - "NaN | \n", - "NaN | \n", - "114.0 | \n", + "44.0 | \n", + "14.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7215,14 +7995,13 @@ "NaN | \n", "|||||
155 | \n", - "CL:0000526 | \n", - "afferent neuron | \n", + "45 | \n", + "GO:1901700 | \n", + "response to oxygen-containing compound | \n", "False | \n", + "45.0 | \n", "NaN | \n", "NaN | \n", - "115.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7231,14 +8010,13 @@ "NaN | \n", "|||||
156 | \n", - "CL:0000540 | \n", - "neuron | \n", + "46 | \n", + "GO:0061024 | \n", + "membrane organization | \n", "False | \n", + "46.0 | \n", "NaN | \n", "NaN | \n", - "116.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7247,13 +8025,12 @@ "NaN | \n", "|||||
157 | \n", - "CL:0000548 | \n", - "animal cell | \n", - "False | \n", - "NaN | \n", + "47 | \n", + "GO:0009966 | \n", + "regulation of signal transduction | \n", + "True | \n", + "47.0 | \n", "NaN | \n", - "117.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7263,30 +8040,28 @@ "NaN | \n", "|||||
158 | \n", - "CL:0002319 | \n", - "neural cell | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "118.0 | \n", - "NaN | \n", + "48 | \n", + "GO:0015031 | \n", + "protein transport | \n", + "True | \n", + "48.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", + "18.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "
159 | \n", - "CL:0002371 | \n", - "somatic cell | \n", + "49 | \n", + "GO:0048523 | \n", + "negative regulation of cellular process | \n", "False | \n", + "49.0 | \n", "NaN | \n", "NaN | \n", - "119.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7295,13 +8070,12 @@ "NaN | \n", "|||||
160 | \n", - "GO:0005575 | \n", - "cellular_component | \n", + "50 | \n", + "GO:0032429 | \n", + "regulation of phospholipase A2 activity | \n", "False | \n", "NaN | \n", - "NaN | \n", - "120.0 | \n", + "7.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7311,13 +8085,12 @@ "NaN | \n", "||||||
161 | \n", - "GO:0005929 | \n", - "cilium | \n", + "51 | \n", + "GO:0034381 | \n", + "plasma lipoprotein particle clearance | \n", "False | \n", "NaN | \n", - "NaN | \n", - "121.0 | \n", + "11.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7327,13 +8100,12 @@ "NaN | \n", "||||||
162 | \n", - "GO:0042995 | \n", - "cell projection | \n", + "52 | \n", + "GO:0031623 | \n", + "receptor internalization | \n", "False | \n", "NaN | \n", - "NaN | \n", - "122.0 | \n", + "12.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7343,13 +8115,12 @@ "NaN | \n", "||||||
163 | \n", - "GO:0043005 | \n", - "neuron projection | \n", + "53 | \n", + "GO:0009931 | \n", + "calcium-dependent protein serine/threonine kinase activity | \n", "False | \n", "NaN | \n", - "NaN | \n", - "123.0 | \n", + "15.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7359,13 +8130,12 @@ "NaN | \n", "||||||
164 | \n", - "GO:0043226 | \n", - "organelle | \n", + "54 | \n", + "GO:0005905 | \n", + "clathrin-coated pit | \n", "False | \n", "NaN | \n", - "NaN | \n", - "124.0 | \n", + "16.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7375,13 +8145,12 @@ "NaN | \n", "||||||
165 | \n", - "GO:0043227 | \n", - "membrane-bounded organelle | \n", + "55 | \n", + "GO:0032050 | \n", + "clathrin heavy chain binding | \n", "False | \n", "NaN | \n", - "NaN | \n", - "125.0 | \n", + "19.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7391,13 +8160,12 @@ "NaN | \n", "||||||
166 | \n", - "GO:0097730 | \n", - "non-motile cilium | \n", + "56 | \n", + "GO:0030299 | \n", + "intestinal cholesterol absorption | \n", "False | \n", "NaN | \n", - "NaN | \n", - "126.0 | \n", + "20.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7407,13 +8175,12 @@ "NaN | \n", "||||||
167 | \n", - "GO:0097731 | \n", - "9+0 non-motile cilium | \n", + "57 | \n", + "GO:0001540 | \n", + "amyloid-beta binding | \n", "False | \n", "NaN | \n", - "NaN | \n", - "127.0 | \n", + "21.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7423,13 +8190,12 @@ "NaN | \n", "||||||
168 | \n", - "GO:0110165 | \n", - "cellular anatomical entity | \n", + "58 | \n", + "GO:0034383 | \n", + "low-density lipoprotein particle clearance | \n", "False | \n", "NaN | \n", - "NaN | \n", - "129.0 | \n", + "23.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7439,13 +8205,12 @@ "NaN | \n", "||||||
169 | \n", - "GO:0120025 | \n", - "plasma membrane bounded cell projection | \n", + "59 | \n", + "GO:0032760 | \n", + "positive regulation of tumor necrosis factor production | \n", "False | \n", "NaN | \n", - "NaN | \n", - "130.0 | \n", + "24.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7455,13 +8220,12 @@ "NaN | \n", "||||||
170 | \n", - "PR:000050567 | \n", - "protein-containing material entity | \n", + "60 | \n", + "GO:0042953 | \n", + "lipoprotein transport | \n", "False | \n", "NaN | \n", - "NaN | \n", - "131.0 | \n", + "25.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7471,13 +8235,12 @@ "NaN | \n", "||||||
171 | \n", - "UBERON:0000061 | \n", - "anatomical structure | \n", + "61 | \n", + "GO:0071404 | \n", + "cellular response to low-density lipoprotein particle stimulus | \n", "False | \n", "NaN | \n", - "NaN | \n", - "132.0 | \n", + "26.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7487,13 +8250,12 @@ "NaN | \n", "||||||
172 | \n", - "UBERON:0000465 | \n", - "material anatomical entity | \n", + "62 | \n", + "GO:0030169 | \n", + "low-density lipoprotein particle binding | \n", "False | \n", "NaN | \n", - "NaN | \n", - "133.0 | \n", + "27.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7503,14 +8265,13 @@ "NaN | \n", "||||||
173 | \n", - "UBERON:0001062 | \n", - "anatomical entity | \n", + "63 | \n", + "GO:0055085 | \n", + "transmembrane transport | \n", "False | \n", "NaN | \n", "NaN | \n", - "134.0 | \n", - "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7519,14 +8280,13 @@ "NaN | \n", "|||||
174 | \n", - "GO:0007275 | \n", - "multicellular organism development | \n", + "64 | \n", + "GO:0043001 | \n", + "Golgi to plasma membrane protein transport | \n", "False | \n", "NaN | \n", "NaN | \n", - "136.0 | \n", - "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7535,15 +8295,14 @@ "NaN | \n", "|||||
175 | \n", - "GO:0007399 | \n", - "nervous system development | \n", + "65 | \n", + "macromolecule transport | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "137.0 | \n", - "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7551,15 +8310,14 @@ "NaN | \n", "||||
176 | \n", - "GO:0022008 | \n", - "neurogenesis | \n", + "66 | \n", + "GO:0000165 | \n", + "MAPK cascade | \n", "False | \n", "NaN | \n", "NaN | \n", - "138.0 | \n", - "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7567,15 +8325,14 @@ "NaN | \n", "||||
177 | \n", - "GO:0030154 | \n", - "cell differentiation | \n", + "67 | \n", + "intracellular trafficking | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "139.0 | \n", - "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", @@ -7583,9030 +8340,1382 @@ "NaN | \n", "||||
178 | \n", - "GO:0032501 | \n", - "multicellular organismal process | \n", + "68 | \n", + "GO:0003924 | \n", + "GTPase activity | \n", "False | \n", "NaN | \n", "NaN | \n", - "140.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
179 | \n", - "GO:0032502 | \n", - "developmental process | \n", + "69 | \n", + "intracellular signaling | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "141.0 | \n", - "NaN | \n", - "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "NaN | \n", "||
180 | \n", - "GO:0048699 | \n", - "generation of neurons | \n", + "70 | \n", + "cytoskeletal reorganization | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "142.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
181 | \n", - "GO:0048731 | \n", - "system development | \n", + "71 | \n", + "GO:0055088 | \n", + "lipid homeostasis | \n", "False | \n", "NaN | \n", "NaN | \n", - "143.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
182 | \n", - "GO:0048856 | \n", - "anatomical structure development | \n", + "72 | \n", + "lysosomal degradation | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "144.0 | \n", - "NaN | \n", - "NaN | \n", "NaN | \n", "NaN | \n", + "6.0 | \n", + "19.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||
183 | \n", - "GO:0048869 | \n", - "cellular developmental process | \n", + "73 | \n", + "the results of the term enrichment test on the list of given genes indicate that the genes are predominately involved in cellular processes such as intracellular signaling | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "145.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
184 | \n", - "GO:0016477 | \n", - "cell migration | \n", + "74 | \n", + "cellular organization | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "147.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "22.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
185 | \n", - "GO:0048870 | \n", - "cell motility | \n", + "75 | \n", + "GO:0005515 | \n", + "protein binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "148.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "21.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
186 | \n", - "GO:0001501 | \n", - "skeletal system development | \n", + "76 | \n", + "GO:0051260 | \n", + "protein homooligomerization | \n", "False | \n", "NaN | \n", "NaN | \n", - "149.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
187 | \n", - "GO:0009653 | \n", - "anatomical structure morphogenesis | \n", + "77 | \n", + "and macropinocytosis. the predominant underlying pathway is protein transport | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "150.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "6.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
188 | \n", - "GO:0009887 | \n", - "animal organ morphogenesis | \n", + "78 | \n", + "from the endoplasmic reticulum to the golgi | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "151.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "7.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
189 | \n", - "GO:0048513 | \n", - "animal organ development | \n", + "79 | \n", + "the nucleus | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "152.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "||||
190 | \n", - "GO:0048705 | \n", - "skeletal system morphogenesis | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "153.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "8.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "||||||
191 | \n", - "GO:0060348 | \n", - "bone development | \n", + "80 | \n", + "and then the plasma membrane. the enriched terms include ‘protein transport’ | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "154.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "9.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
192 | \n", - "GO:0060349 | \n", - "bone morphogenesis | \n", + "81 | \n", + "'lysosomal degradation' | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "155.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "10.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
193 | \n", - "GO:0060350 | \n", - "endochondral bone morphogenesis | \n", + "82 | \n", + "'endocytosis' | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "156.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "11.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
194 | \n", - "GO:0001503 | \n", - "ossification | \n", + "83 | \n", + "'cellular organization' | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "157.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "12.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
195 | \n", - "GO:0036075 | \n", - "replacement ossification | \n", + "84 | \n", + "'protein binding' | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "159.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "13.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
196 | \n", - "GO:0000166 | \n", - "nucleotide binding | \n", + "85 | \n", + "‘cellular signaling’ | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "162.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "14.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
197 | \n", - "GO:0017076 | \n", - "purine nucleotide binding | \n", + "86 | \n", + "‘gtpase activity’ | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "164.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "15.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
198 | \n", - "GO:0030554 | \n", - "adenyl nucleotide binding | \n", + "87 | \n", + "‘macropinocytosis’ | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "165.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "16.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
199 | \n", - "GO:0032553 | \n", - "ribonucleotide binding | \n", + "88 | \n", + "and ‘protein homooligomerization’. \\n\\nsummary: genes are predominantly involved in cellular processes such as intracellular signaling | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "166.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "17.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
200 | \n", - "GO:0032555 | \n", - "purine ribonucleotide binding | \n", + "89 | \n", + "and macropinocytosis. \\n\\nmechanism: protein transport from the endoplasmic reticulum to the golgi | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "167.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "23.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
201 | \n", - "GO:0032559 | \n", - "adenyl ribonucleotide binding | \n", + "90 | \n", + "GO:0005634 | \n", + "nucleus | \n", "False | \n", "NaN | \n", "NaN | \n", - "168.0 | \n", - "NaN | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "24.0 | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "||
202 | \n", - "GO:0035639 | \n", - "purine ribonucleoside triphosphate binding | \n", + "91 | \n", + "then the plasma membrane. \\n\\nenriched | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "169.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "25.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "|||
203 | \n", - "GO:0036094 | \n", - "small molecule binding | \n", + "92 | \n", + "GO:0004672 | \n", + "protein kinase activity | \n", "False | \n", "NaN | \n", "NaN | \n", - "170.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "NaN | \n", "|||
204 | \n", - "GO:0043167 | \n", - "ion binding | \n", + "93 | \n", + "GO:0000902 | \n", + "cell morphogenesis | \n", "False | \n", "NaN | \n", "NaN | \n", - "171.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "NaN | \n", "|||
205 | \n", - "GO:0043168 | \n", - "anion binding | \n", + "94 | \n", + "GO:0048468 | \n", + "cell development | \n", "False | \n", "NaN | \n", "NaN | \n", - "172.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "NaN | \n", "|||
206 | \n", - "GO:0097159 | \n", - "organic cyclic compound binding | \n", + "95 | \n", + "GO:0007155 | \n", + "cell adhesion | \n", "False | \n", "NaN | \n", "NaN | \n", - "173.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "NaN | \n", "NaN | \n", "|||
207 | \n", - "GO:0097367 | \n", - "carbohydrate derivative binding | \n", + "96 | \n", + "GO:0010467 | \n", + "gene expression | \n", "False | \n", "NaN | \n", "NaN | \n", - "174.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "NaN | \n", "|||
208 | \n", - "GO:1901265 | \n", - "nucleoside phosphate binding | \n", + "97 | \n", + "protein-protein interaction | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "175.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "6.0 | \n", "NaN | \n", "NaN | \n", "|||
209 | \n", - "GO:1901363 | \n", - "heterocyclic compound binding | \n", + "98 | \n", + "gtp-dependent protein binding activity | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "176.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "|||
210 | \n", - "GO:0005622 | \n", - "intracellular anatomical structure | \n", + "99 | \n", + "GO:0004674 | \n", + "protein serine/threonine kinase activity | \n", "False | \n", "NaN | \n", "NaN | \n", - "177.0 | \n", - "NaN | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "||||
211 | \n", - "GO:0005634 | \n", - "nucleus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "178.0 | \n", - "NaN | \n", - "NaN | \n", "NaN | \n", "1.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", "|||||||
212 | \n", - "GO:0031974 | \n", - "membrane-enclosed lumen | \n", + "100 | \n", + "protein ubiquitin ligase activity | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "179.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "|||
213 | \n", - "GO:0031981 | \n", - "nuclear lumen | \n", + "101 | \n", + "GO:0032880 | \n", + "regulation of protein localization | \n", "False | \n", "NaN | \n", "NaN | \n", - "180.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "|||
214 | \n", - "GO:0043229 | \n", - "intracellular organelle | \n", + "102 | \n", + "signaling receptor binding activity | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "181.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "4.0 | \n", "|||
215 | \n", - "GO:0043231 | \n", - "intracellular membrane-bounded organelle | \n", + "103 | \n", + "t cell receptor binding activity | \n", + "None | \n", "False | \n", "NaN | \n", "NaN | \n", - "182.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "|||
216 | \n", - "GO:0043233 | \n", - "organelle lumen | \n", + "104 | \n", + "GO:0005739 | \n", + "mitochondrion | \n", "False | \n", "NaN | \n", "NaN | \n", - "183.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "0.0 | \n", "NaN | \n", "|||
217 | \n", - "GO:0070013 | \n", - "intracellular organelle lumen | \n", + "105 | \n", + "GO:0006357 | \n", + "regulation of transcription by RNA polymerase II | \n", "False | \n", "NaN | \n", "NaN | \n", - "184.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "1.0 | \n", "NaN | \n", "|||
218 | \n", - "GO:0012505 | \n", - "endomembrane system | \n", + "106 | \n", + "GO:0005615 | \n", + "extracellular space | \n", "False | \n", "NaN | \n", "NaN | \n", - "197.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "2.0 | \n", "NaN | \n", "|||
219 | \n", - "GO:0006807 | \n", - "nitrogen compound metabolic process | \n", + "107 | \n", + "GO:0003723 | \n", + "RNA binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "203.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "3.0 | \n", "NaN | \n", "|||
220 | \n", - "GO:0016567 | \n", - "protein ubiquitination | \n", + "108 | \n", + "GO:0070062 | \n", + "extracellular exosome | \n", "False | \n", "NaN | \n", "NaN | \n", - "204.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "5.0 | \n", "NaN | \n", "|||
221 | \n", - "GO:0019538 | \n", - "protein metabolic process | \n", + "109 | \n", + "GO:0005524 | \n", + "ATP binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "205.0 | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", - "3.0 | \n", "NaN | \n", + "6.0 | \n", "NaN | \n", "|||
222 | \n", - "GO:0032446 | \n", - "protein modification by small protein conjugation | \n", + "110 | \n", + "GO:0042802 | \n", + "identical protein binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "206.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "7.0 | \n", "NaN | \n", "|||
223 | \n", - "GO:0036211 | \n", - "protein modification process | \n", + "111 | \n", + "GO:0005829 | \n", + "cytosol | \n", "False | \n", "NaN | \n", "NaN | \n", - "207.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "8.0 | \n", "NaN | \n", "|||
224 | \n", - "GO:0043170 | \n", - "macromolecule metabolic process | \n", + "112 | \n", + "GO:0005654 | \n", + "nucleoplasm | \n", "False | \n", "NaN | \n", "NaN | \n", - "208.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "9.0 | \n", "NaN | \n", "|||
225 | \n", - "GO:0043412 | \n", - "macromolecule modification | \n", + "113 | \n", + "GO:0005737 | \n", + "cytoplasm | \n", "False | \n", "NaN | \n", "NaN | \n", - "209.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "10.0 | \n", "NaN | \n", "|||
226 | \n", - "GO:0070647 | \n", - "protein modification by small protein conjugation or removal | \n", + "114 | \n", + "GO:0016020 | \n", + "membrane | \n", "False | \n", "NaN | \n", "NaN | \n", - "210.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "11.0 | \n", "NaN | \n", "|||
227 | \n", - "GO:1901564 | \n", - "organonitrogen compound metabolic process | \n", + "115 | \n", + "GO:0005886 | \n", + "plasma membrane | \n", "False | \n", "NaN | \n", "NaN | \n", - "211.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "12.0 | \n", "NaN | \n", "|||
228 | \n", - "GO:0051179 | \n", - "localization | \n", + "116 | \n", + "GO:0005576 | \n", + "extracellular region | \n", "False | \n", "NaN | \n", "NaN | \n", - "214.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "13.0 | \n", "NaN | \n", "|||
229 | \n", - "GO:0016043 | \n", - "cellular component organization | \n", + "117 | \n", + "GO:0045944 | \n", + "positive regulation of transcription by RNA polymerase II | \n", "False | \n", "NaN | \n", "NaN | \n", - "224.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "14.0 | \n", "NaN | \n", "|||
230 | \n", - "GO:0071840 | \n", - "cellular component organization or biogenesis | \n", + "118 | \n", + "GO:0046872 | \n", + "metal ion binding | \n", "False | \n", "NaN | \n", "NaN | \n", - "233.0 | \n", - "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", "NaN | \n", + "15.0 | \n", "NaN | \n", "|||
231 | \n", - "GO:1901575 | \n", - "organic substance catabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "248.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
232 | \n", - "GO:0007005 | \n", - "mitochondrion organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "249.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
233 | \n", - "GO:0061024 | \n", - "membrane organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "251.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
234 | \n", - "GO:0010256 | \n", - "endomembrane system organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "252.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
235 | \n", - "GO:0043169 | \n", - "cation binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "255.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
236 | \n", - "GO:0046872 | \n", - "metal ion binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "256.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
237 | \n", - "GO:0046914 | \n", - "transition metal ion binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "257.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
238 | \n", - "GO:0005215 | \n", - "transporter activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "261.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
239 | \n", - "GO:0022857 | \n", - "transmembrane transporter activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "263.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
240 | \n", - "GO:0022884 | \n", - "macromolecule transmembrane transporter activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "264.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
241 | \n", - "GO:0006662 | \n", - "glycerol ether metabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "266.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
242 | \n", - "GO:0008610 | \n", - "lipid biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "267.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
243 | \n", - "GO:0009058 | \n", - "biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "269.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
244 | \n", - "GO:0018904 | \n", - "ether metabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "270.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
245 | \n", - "GO:0044249 | \n", - "cellular biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "271.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
246 | \n", - "GO:0046485 | \n", - "ether lipid metabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "272.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
247 | \n", - "GO:0046504 | \n", - "glycerol ether biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "273.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
248 | \n", - "GO:0097384 | \n", - "cellular lipid biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "274.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
249 | \n", - "GO:1901503 | \n", - "ether biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "275.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
250 | \n", - "GO:1901576 | \n", - "organic substance biosynthetic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "276.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
251 | \n", - "GO:0000428 | \n", - "DNA-directed RNA polymerase complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "286.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
252 | \n", - "GO:0016591 | \n", - "RNA polymerase II, holoenzyme | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "287.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
253 | \n", - "GO:0030880 | \n", - "RNA polymerase complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "288.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
254 | \n", - "GO:0055029 | \n", - "nuclear DNA-directed RNA polymerase complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "290.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
255 | \n", - "GO:0061695 | \n", - "transferase complex, transferring phosphorus-containing groups | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "291.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
256 | \n", - "GO:0140513 | \n", - "nuclear protein-containing complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "292.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
257 | \n", - "GO:0140535 | \n", - "intracellular protein-containing complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "293.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
258 | \n", - "GO:1902494 | \n", - "catalytic complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "294.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
259 | \n", - "GO:1990234 | \n", - "transferase complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "295.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
260 | \n", - "GO:0008023 | \n", - "transcription elongation factor complex | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "296.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
261 | \n", - "GO:0140657 | \n", - "ATP-dependent activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "298.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
262 | \n", - "GO:0003824 | \n", - "catalytic activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "299.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
263 | \n", - "GO:0016462 | \n", - "pyrophosphatase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "300.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
264 | \n", - "GO:0016787 | \n", - "hydrolase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "301.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
265 | \n", - "GO:0016817 | \n", - "hydrolase activity, acting on acid anhydrides | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "302.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
266 | \n", - "GO:0016818 | \n", - "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "303.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
267 | \n", - "GO:0017111 | \n", - "ribonucleoside triphosphate phosphatase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "305.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
268 | \n", - "GO:0005515 | \n", - "protein binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "306.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
269 | \n", - "GO:0007417 | \n", - "central nervous system development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "308.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
270 | \n", - "GO:0007420 | \n", - "brain development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "309.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
271 | \n", - "GO:0021537 | \n", - "telencephalon development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "310.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
272 | \n", - "GO:0021543 | \n", - "pallium development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "311.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
273 | \n", - "GO:0021987 | \n", - "cerebral cortex development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "312.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
274 | \n", - "GO:0030900 | \n", - "forebrain development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "313.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
275 | \n", - "GO:0060322 | \n", - "head development | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "314.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
276 | \n", - "GO:0021885 | \n", - "forebrain cell migration | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "316.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
277 | \n", - "GO:0022029 | \n", - "telencephalon cell migration | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "317.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
278 | \n", - "GO:0021953 | \n", - "central nervous system neuron differentiation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "319.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
279 | \n", - "GO:0030182 | \n", - "neuron differentiation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "320.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
280 | \n", - "GO:0060090 | \n", - "molecular adaptor activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "322.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
281 | \n", - "GO:0051020 | \n", - "GTPase binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "324.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
282 | \n", - "GO:0043254 | \n", - "regulation of protein-containing complex assembly | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "326.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
283 | \n", - "GO:0044087 | \n", - "regulation of cellular component biogenesis | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "327.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
284 | \n", - "GO:0048519 | \n", - "negative regulation of biological process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "328.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
285 | \n", - "GO:0048523 | \n", - "negative regulation of cellular process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "329.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
286 | \n", - "GO:0050789 | \n", - "regulation of biological process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "330.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
287 | \n", - "GO:0050794 | \n", - "regulation of cellular process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "331.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
288 | \n", - "GO:0051128 | \n", - "regulation of cellular component organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "332.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
289 | \n", - "GO:0051129 | \n", - "negative regulation of cellular component organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "333.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
290 | \n", - "GO:0065007 | \n", - "biological regulation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "334.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
291 | \n", - "GO:0031647 | \n", - "regulation of protein stability | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "335.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
292 | \n", - "GO:0065008 | \n", - "regulation of biological quality | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "337.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
293 | \n", - "GO:0000302 | \n", - "response to reactive oxygen species | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "340.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
294 | \n", - "GO:0006950 | \n", - "response to stress | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "341.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
295 | \n", - "GO:0006979 | \n", - "response to oxidative stress | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "342.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
296 | \n", - "GO:0033554 | \n", - "cellular response to stress | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "343.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
297 | \n", - "GO:0034599 | \n", - "cellular response to oxidative stress | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "344.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
298 | \n", - "GO:0042221 | \n", - "response to chemical | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "346.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
299 | \n", - "GO:0050896 | \n", - "response to stimulus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "347.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
300 | \n", - "GO:0051716 | \n", - "cellular response to stimulus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "348.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
301 | \n", - "GO:0062197 | \n", - "cellular response to chemical stress | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "349.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
302 | \n", - "GO:0070887 | \n", - "cellular response to chemical stimulus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "350.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
303 | \n", - "GO:1901700 | \n", - "response to oxygen-containing compound | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "351.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
304 | \n", - "GO:1901701 | \n", - "cellular response to oxygen-containing compound | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "352.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
305 | \n", - "GO:0040008 | \n", - "regulation of growth | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "353.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
306 | \n", - "GO:0040014 | \n", - "regulation of multicellular organism growth | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "354.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
307 | \n", - "GO:0045927 | \n", - "positive regulation of growth | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "356.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
308 | \n", - "GO:0048518 | \n", - "positive regulation of biological process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "357.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
309 | \n", - "GO:0048638 | \n", - "regulation of developmental growth | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "358.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
310 | \n", - "GO:0048639 | \n", - "positive regulation of developmental growth | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "359.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
311 | \n", - "GO:0050793 | \n", - "regulation of developmental process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "360.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
312 | \n", - "GO:0051094 | \n", - "positive regulation of developmental process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "361.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
313 | \n", - "GO:0051239 | \n", - "regulation of multicellular organismal process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "362.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
314 | \n", - "GO:0051240 | \n", - "positive regulation of multicellular organismal process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "363.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
315 | \n", - "GO:0042802 | \n", - "identical protein binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "364.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
316 | \n", - "GO:0046983 | \n", - "protein dimerization activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "366.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
317 | \n", - "GO:0022411 | \n", - "cellular component disassembly | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "369.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
318 | \n", - "GO:0032984 | \n", - "protein-containing complex disassembly | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "370.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
319 | \n", - "GO:0043933 | \n", - "protein-containing complex organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "371.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
320 | \n", - "GO:0006612 | \n", - "protein targeting to membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "374.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
321 | \n", - "GO:0051668 | \n", - "localization within membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "376.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
322 | \n", - "GO:0072657 | \n", - "protein localization to membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "377.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
323 | \n", - "GO:0090150 | \n", - "establishment of protein localization to membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "378.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
324 | \n", - "GO:0008285 | \n", - "negative regulation of cell population proliferation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "379.0 | \n", - "9.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
325 | \n", - "GO:0042127 | \n", - "regulation of cell population proliferation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "380.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
326 | \n", - "GO:0048145 | \n", - "regulation of fibroblast proliferation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "381.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
327 | \n", - "GO:0050678 | \n", - "regulation of epithelial cell proliferation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "384.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
328 | \n", - "GO:0003008 | \n", - "system process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "387.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
329 | \n", - "GO:0050877 | \n", - "nervous system process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "388.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
330 | \n", - "GO:0007017 | \n", - "microtubule-based process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "390.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
331 | \n", - "GO:0051640 | \n", - "organelle localization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "391.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
332 | \n", - "GO:0060151 | \n", - "peroxisome localization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "392.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
333 | \n", - "GO:0004842 | \n", - "ubiquitin-protein transferase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "394.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
334 | \n", - "GO:0016740 | \n", - "transferase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "395.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
335 | \n", - "GO:0016746 | \n", - "acyltransferase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "396.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
336 | \n", - "GO:0016755 | \n", - "aminoacyltransferase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "397.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
337 | \n", - "GO:0019787 | \n", - "ubiquitin-like protein transferase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "398.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
338 | \n", - "GO:0061659 | \n", - "ubiquitin-like protein ligase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "400.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
339 | \n", - "GO:0140096 | \n", - "catalytic activity, acting on a protein | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "401.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
340 | \n", - "GO:0005576 | \n", - "extracellular region | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "402.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
341 | \n", - "GO:0005615 | \n", - "extracellular space | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "403.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
342 | \n", - "GO:0031982 | \n", - "vesicle | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "404.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
343 | \n", - "GO:0043230 | \n", - "extracellular organelle | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "405.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
344 | \n", - "GO:0065010 | \n", - "extracellular membrane-bounded organelle | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "406.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
345 | \n", - "GO:1903561 | \n", - "extracellular vesicle | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "408.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
346 | \n", - "GO:0140030 | \n", - "modification-dependent protein binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "409.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
347 | \n", - "GO:0140104 | \n", - "molecular carrier activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "412.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
348 | \n", - "GO:0009605 | \n", - "response to external stimulus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "414.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
349 | \n", - "GO:0009991 | \n", - "response to extracellular stimulus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "415.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
350 | \n", - "GO:0031667 | \n", - "response to nutrient levels | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "416.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
351 | \n", - "GO:0042594 | \n", - "response to starvation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "417.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
352 | \n", - "peroxisome biogenesis | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "0.0 | \n", - "NaN | \n", - "|||||||
353 | \n", - "GO:0065005 | \n", - "protein-lipid complex assembly | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
354 | \n", - "GO:0065003 | \n", - "protein-containing complex assembly | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
355 | \n", - "GO:0051262 | \n", - "protein tetramerization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
356 | \n", - "peroxisome membrane organization | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
357 | \n", - "protein import into peroxisome | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
358 | \n", - "MONDO:0019234 | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
359 | \n", - "peroxisomal biogenesis | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "|||||||
360 | \n", - "protein-lipid complex formation | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "|||||||
361 | \n", - "peroxisomal targeting signal | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "|||||||
362 | \n", - "peroxins | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "|||||||
363 | \n", - "peroxisomal matrix proteins import | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "|||||||
364 | \n", - "mitochondrial metabolism | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
365 | \n", - "cellular transport | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
366 | \n", - "devlopment of membrane structures | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
367 | \n", - "cell membrane homeostasis | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
368 | \n", - "dna and rna processing | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "7.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
369 | \n", - "mitochondrial crop assembly | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "8.0 | \n", - "NaN | \n", - "NaN | \n", - "|||||||
370 | \n", - "peroxisomal protein import | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "|||||||
371 | \n", - "membrane vesicle assembly | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "|||||||
372 | \n", - "c-terminal tripeptide peroxisomal targeting signal binding | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "|||||||
373 | \n", - "GO:0005886 | \n", - "plasma membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
\n", - " | model | \n", - "method | \n", - "has top hit | \n", - "in top 5 | \n", - "in top 10 | \n", - "size overlap | \n", - "similarity | \n", - "num terms | \n", - "num GO terms | \n", - "nr size overlap | \n", - "nr similarity | \n", - "mean p value | \n", - "min p value | \n", - "max p value | \n", - "proportion significant | \n", - "num novel | \n", - "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
534 | \n", - "N/A | \n", - "standard | \n", - "True | \n", - "True | \n", - "True | \n", - "9 | \n", - "1.00e+00 | \n", - "9 | \n", - "9 | \n", - "3 | \n", - "1.00 | \n", - "0.01 | \n", - "1.95e-05 | \n", - "0.04 | \n", - "1.00 | \n", - "0 | \n", - "
535 | \n", - "N/A | \n", - "standard_no_ontology | \n", - "False | \n", - "False | \n", - "False | \n", - "3 | \n", - "3.00e-01 | \n", - "4 | \n", - "4 | \n", - "1 | \n", - "0.20 | \n", - "0.26 | \n", - "3.13e-04 | \n", - "1.00 | \n", - "0.75 | \n", - "0 | \n", - "
528 | \n", - "gpt-3.5-turbo | \n", - "no_synopsis | \n", - "False | \n", - "False | \n", - "False | \n", - "1 | \n", - "7.69e-02 | \n", - "6 | \n", - "5 | \n", - "0 | \n", - "0.00 | \n", - "0.80 | \n", - "2.24e-02 | \n", - "1.00 | \n", - "0.20 | \n", - "0 | \n", - "
529 | \n", - "gpt-3.5-turbo | \n", - "ontological_synopsis | \n", - "True | \n", - "True | \n", - "True | \n", - "1 | \n", - "7.69e-02 | \n", - "6 | \n", - "5 | \n", - "1 | \n", - "0.14 | \n", - "0.80 | \n", - "1.95e-05 | \n", - "1.00 | \n", - "0.20 | \n", - "0 | \n", - "
538 | \n", - "N/A | \n", - "None | \n", - "True | \n", - "False | \n", - "False | \n", - "9 | \n", - "8.51e-03 | \n", - "1360 | \n", - "1314 | \n", - "0 | \n", - "0.00 | \n", - "0.99 | \n", - "1.95e-05 | \n", - "1.00 | \n", - "0.01 | \n", - "0 | \n", - "
530 | \n", - "gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "3 | \n", - "1 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "0 | \n", - "
531 | \n", - "text-davinci-003 | \n", - "no_synopsis | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "7 | \n", - "5 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "1 | \n", - "
532 | \n", - "text-davinci-003 | \n", - "ontological_synopsis | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "5 | \n", - "4 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "1 | \n", - "
533 | \n", - "text-davinci-003 | \n", - "narrative_synopsis | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "8 | \n", - "1 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "0 | \n", - "
536 | \n", - "N/A | \n", - "random | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "15 | \n", - "15 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "9 | \n", - "
537 | \n", - "N/A | \n", - "rank_based | \n", - "False | \n", - "False | \n", - "False | \n", - "0 | \n", - "0.00e+00 | \n", - "15 | \n", - "15 | \n", - "0 | \n", - "0.00 | \n", - "1.00 | \n", - "1.00e+00 | \n", - "1.00 | \n", - "0.00 | \n", - "0 | \n", - "
\n", - " | model | \n", - "method | \n", - "go term ids | \n", - "novel labels | \n", - "
---|---|---|---|---|
534 | \n", - "N/A | \n", - "standard | \n", - "[GO:0042552, GO:0008366, GO:0007272, GO:0007422, GO:0014037, GO:0010001, GO:0032287, GO:0006264, GO:0042063] | \n", - "[] | \n", - "
535 | \n", - "N/A | \n", - "standard_no_ontology | \n", - "[GO:0021680, GO:0032287, GO:0006264, GO:0007422] | \n", - "[] | \n", - "
528 | \n", - "gpt-3.5-turbo | \n", - "no_synopsis | \n", - "[GO:0032287, GO:0006606, GO:0015031, GO:0007599, GO:0006826] | \n", - "[] | \n", - "
529 | \n", - "gpt-3.5-turbo | \n", - "ontological_synopsis | \n", - "[GO:0042552, GO:0007600, GO:0016567, GO:0006260, GO:0015886] | \n", - "[] | \n", - "
538 | \n", - "N/A | \n", - "None | \n", - "[GO:0021665, GO:0035284, GO:0014040, GO:0071837, GO:0006607, GO:0060170, GO:0005791, GO:0070417, GO:0008033, GO:0005739, GO:0043154, GO:0006096, GO:0005788, GO:0008139, GO:0060586, GO:0007165, GO:0051156, GO:0003677, GO:0000976, GO:0006839, GO:0075732, GO:0006268, GO:0045475, GO:0060173, GO:0006879, GO:0030200, GO:0007420, GO:0042391, GO:0050974, GO:0007028, GO:0003678, GO:0036494, GO:0043218, GO:0032991, GO:0048168, GO:0045444, GO:0001573, GO:0005790, GO:0032355, GO:0019901, GO:0098743, GO:0021612, GO:0034975, GO:0042564, GO:0048704, GO:0006986, GO:0098655, GO:0106074, GO:0043209, GO:0008381, GO:1904813, GO:0043005, GO:0003183, GO:0000981, GO:0030218, GO:0006801, GO:0034214, GO:0071333, GO:0034101, GO:0031410, GO:0099022, GO:0046686, GO:0065003, GO:0071260, GO:0032963, GO:0042982, GO:0061744, GO:0045893, GO:0034142, GO:0032287, GO:0005764, GO:0048143, GO:0002639, GO:0030154, GO:0140018, GO:0043231, GO:0007622, GO:0061629, GO:1904390, GO:0016887, GO:0001889, GO:0043524, GO:0002196, GO:0031069, GO:0005760, GO:0005634, GO:0032060, GO:0042474, GO:0006259, GO:0046718, GO:0003697, GO:0051087, GO:0034285, GO:0097577, GO:0042552, GO:0097367, GO:0014037, GO:0006419, GO:0048536, GO:0005789, ...] | \n", - "[] | \n", - "
530 | \n", - "gpt-3.5-turbo | \n", - "narrative_synopsis | \n", - "[GO:0030218] | \n", - "[] | \n", - "
531 | \n", - "text-davinci-003 | \n", - "no_synopsis | \n", - "[GO:0007165, GO:0016192, GO:0015031, GO:0005643, GO:0006836] | \n", - "[neurotransmitter transport] | \n", - "
532 | \n", - "text-davinci-003 | \n", - "ontological_synopsis | \n", - "[GO:0016567, GO:0015031, GO:0008380, GO:0006260] | \n", - "[RNA splicing] | \n", - "
533 | \n", - "text-davinci-003 | \n", - "narrative_synopsis | \n", - "[GO:0032288] | \n", - "[] | \n", - "
536 | \n", - "N/A | \n", - "random | \n", - "[GO:0031410, GO:0042060, GO:0042475, GO:0050896, GO:0030175, GO:0043014, GO:0004758, GO:0030071, GO:0005694, GO:0008378, GO:0005886, GO:0006672, GO:0031623, GO:0070584, GO:0043588] | \n", - "[wound healing, odontogenesis of dentin-containing tooth, filopodium, alpha-tubulin binding, serine C-palmitoyltransferase activity, regulation of mitotic metaphase/anaphase transition, galactosyltransferase activity, receptor internalization, mitochondrion morphogenesis] | \n", - "
537 | \n", - "N/A | \n", - "rank_based | \n", - "[GO:0016020, GO:0005737, GO:0070062, GO:0005524, GO:0046872, GO:0005634, GO:0005576, GO:0042802, GO:0005829, GO:0005654, GO:0005886, GO:0005739, GO:0006357, GO:0005615, GO:0003723] | \n", - "[] | \n", - "
\n", - " | id | \n", - "label | \n", - "redundant | \n", - "standard | \n", - "standard no ontology | \n", - "turbo gpt-3.5-turbo.ontological synopsis | \n", - "dav text-davinci-003.narrative synopsis | \n", - "dav text-davinci-003.ontological synopsis | \n", - "turbo gpt-3.5-turbo.narrative synopsis | \n", - "turbo gpt-3.5-turbo.no synopsis | \n", - "rank based | \n", - "dav text-davinci-003.no synopsis | \n", - "random | \n", - "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | \n", - "GO:0006907 | \n", - "pinocytosis | \n", - "False | \n", - "0.0 | \n", - "1.0 | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
1 | \n", - "GO:0006897 | \n", - "endocytosis | \n", - "True | \n", - "1.0 | \n", - "6.0 | \n", - "0.0 | \n", - "1.0 | \n", - "13.0 | \n", - "0.0 | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
2 | \n", - "GO:0044351 | \n", - "macropinocytosis | \n", - "True | \n", - "2.0 | \n", - "0.0 | \n", - "NaN | \n", - "5.0 | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
3 | \n", - "GO:0016192 | \n", - "vesicle-mediated transport | \n", - "True | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
4 | \n", - "GO:0030100 | \n", - "regulation of endocytosis | \n", - "False | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
5 | \n", - "GO:0006810 | \n", - "transport | \n", - "True | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
6 | \n", - "GO:0051234 | \n", - "establishment of localization | \n", - "True | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
7 | \n", - "GO:0045807 | \n", - "positive regulation of endocytosis | \n", - "True | \n", - "7.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
8 | \n", - "GO:0060627 | \n", - "regulation of vesicle-mediated transport | \n", - "True | \n", - "8.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
9 | \n", - "GO:0051179 | \n", - "localization | \n", - "True | \n", - "9.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
10 | \n", - "GO:0031410 | \n", - "cytoplasmic vesicle | \n", - "False | \n", - "10.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
11 | \n", - "GO:0097708 | \n", - "intracellular vesicle | \n", - "True | \n", - "11.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
12 | \n", - "GO:0050766 | \n", - "positive regulation of phagocytosis | \n", - "True | \n", - "12.0 | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
13 | \n", - "GO:0048518 | \n", - "positive regulation of biological process | \n", - "True | \n", - "13.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
14 | \n", - "GO:0050764 | \n", - "regulation of phagocytosis | \n", - "True | \n", - "14.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
15 | \n", - "GO:0051128 | \n", - "regulation of cellular component organization | \n", - "True | \n", - "15.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
16 | \n", - "GO:0031982 | \n", - "vesicle | \n", - "True | \n", - "16.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
17 | \n", - "GO:0150094 | \n", - "amyloid-beta clearance by cellular catabolic process | \n", - "False | \n", - "17.0 | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
18 | \n", - "GO:0006909 | \n", - "phagocytosis | \n", - "True | \n", - "18.0 | \n", - "17.0 | \n", - "4.0 | \n", - "NaN | \n", - "10.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
19 | \n", - "GO:0051049 | \n", - "regulation of transport | \n", - "True | \n", - "19.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
20 | \n", - "GO:0006898 | \n", - "receptor-mediated endocytosis | \n", - "True | \n", - "20.0 | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
21 | \n", - "GO:0051050 | \n", - "positive regulation of transport | \n", - "True | \n", - "21.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
22 | \n", - "GO:0005041 | \n", - "low-density lipoprotein particle receptor activity | \n", - "True | \n", - "22.0 | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
23 | \n", - "GO:0030139 | \n", - "endocytic vesicle | \n", - "True | \n", - "23.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
24 | \n", - "GO:0030228 | \n", - "lipoprotein particle receptor activity | \n", - "True | \n", - "24.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
25 | \n", - "GO:0030666 | \n", - "endocytic vesicle membrane | \n", - "True | \n", - "25.0 | \n", - "18.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
26 | \n", - "GO:0097242 | \n", - "amyloid-beta clearance | \n", - "True | \n", - "26.0 | \n", - "22.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
27 | \n", - "GO:0051130 | \n", - "positive regulation of cellular component organization | \n", - "True | \n", - "27.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
28 | \n", - "GO:0060907 | \n", - "positive regulation of macrophage cytokine production | \n", - "True | \n", - "28.0 | \n", - "8.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
29 | \n", - "GO:0032879 | \n", - "regulation of localization | \n", - "True | \n", - "29.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
30 | \n", - "GO:0048522 | \n", - "positive regulation of cellular process | \n", - "True | \n", - "30.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
31 | \n", - "GO:0002277 | \n", - "myeloid dendritic cell activation involved in immune response | \n", - "False | \n", - "31.0 | \n", - "9.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
32 | \n", - "GO:0030659 | \n", - "cytoplasmic vesicle membrane | \n", - "True | \n", - "32.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
33 | \n", - "GO:0012506 | \n", - "vesicle membrane | \n", - "True | \n", - "33.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
34 | \n", - "GO:0061081 | \n", - "positive regulation of myeloid leukocyte cytokine production involved in immune response | \n", - "True | \n", - "34.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
35 | \n", - "GO:0010935 | \n", - "regulation of macrophage cytokine production | \n", - "True | \n", - "35.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
36 | \n", - "GO:0048583 | \n", - "regulation of response to stimulus | \n", - "False | \n", - "36.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
37 | \n", - "GO:1905167 | \n", - "positive regulation of lysosomal protein catabolic process | \n", - "True | \n", - "37.0 | \n", - "11.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
38 | \n", - "GO:0009894 | \n", - "regulation of catabolic process | \n", - "True | \n", - "38.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
39 | \n", - "GO:0023051 | \n", - "regulation of signaling | \n", - "False | \n", - "39.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
40 | \n", - "GO:0051641 | \n", - "cellular localization | \n", - "True | \n", - "40.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
41 | \n", - "GO:1904352 | \n", - "positive regulation of protein catabolic process in the vacuole | \n", - "True | \n", - "41.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
42 | \n", - "GO:0070508 | \n", - "cholesterol import | \n", - "True | \n", - "42.0 | \n", - "13.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
43 | \n", - "GO:0031347 | \n", - "regulation of defense response | \n", - "True | \n", - "43.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
44 | \n", - "GO:0005794 | \n", - "Golgi apparatus | \n", - "False | \n", - "44.0 | \n", - "14.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
45 | \n", - "GO:1901700 | \n", - "response to oxygen-containing compound | \n", - "False | \n", - "45.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
46 | \n", - "GO:0061024 | \n", - "membrane organization | \n", - "False | \n", - "46.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
47 | \n", - "GO:0009966 | \n", - "regulation of signal transduction | \n", - "True | \n", - "47.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
48 | \n", - "GO:0015031 | \n", - "protein transport | \n", - "True | \n", - "48.0 | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
49 | \n", - "GO:0048523 | \n", - "negative regulation of cellular process | \n", - "False | \n", - "49.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
50 | \n", - "GO:0032429 | \n", - "regulation of phospholipase A2 activity | \n", - "False | \n", - "NaN | \n", - "7.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
51 | \n", - "GO:0034381 | \n", - "plasma lipoprotein particle clearance | \n", - "False | \n", - "NaN | \n", - "10.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
52 | \n", - "GO:0031623 | \n", - "receptor internalization | \n", - "False | \n", - "NaN | \n", - "12.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
53 | \n", - "GO:0009931 | \n", - "calcium-dependent protein serine/threonine kinase activity | \n", - "False | \n", - "NaN | \n", - "15.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
54 | \n", - "GO:0005905 | \n", - "clathrin-coated pit | \n", - "False | \n", - "NaN | \n", - "16.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
55 | \n", - "GO:0032050 | \n", - "clathrin heavy chain binding | \n", - "False | \n", - "NaN | \n", - "19.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
56 | \n", - "GO:0030299 | \n", - "intestinal cholesterol absorption | \n", - "False | \n", - "NaN | \n", - "20.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
57 | \n", - "GO:0001540 | \n", - "amyloid-beta binding | \n", - "False | \n", - "NaN | \n", - "21.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
58 | \n", - "GO:0034383 | \n", - "low-density lipoprotein particle clearance | \n", - "False | \n", - "NaN | \n", - "23.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
59 | \n", - "GO:0032760 | \n", - "positive regulation of tumor necrosis factor production | \n", - "False | \n", - "NaN | \n", - "24.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
60 | \n", - "GO:0042953 | \n", - "lipoprotein transport | \n", - "False | \n", - "NaN | \n", - "25.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
61 | \n", - "GO:0071404 | \n", - "cellular response to low-density lipoprotein particle stimulus | \n", - "False | \n", - "NaN | \n", - "26.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
62 | \n", - "GO:0030169 | \n", - "low-density lipoprotein particle binding | \n", - "False | \n", - "NaN | \n", - "27.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
63 | \n", - "actin filament formation | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
64 | \n", - "lipid and fatty acid metabolism | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
65 | \n", - "GO:0007155 | \n", - "cell adhesion | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
66 | \n", - "intracellular trafficking | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
67 | \n", - "GO:0005480 | \n", - "obsolete vesicle transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
68 | \n", - "GO:0055085 | \n", - "transmembrane transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
69 | \n", - "GO:0006893 | \n", - "Golgi to plasma membrane transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
70 | \n", - "protein binding activity | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
71 | \n", - "GO:0005886 | \n", - "plasma membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "11.0 | \n", - "NaN | \n", - "NaN | \n", - "
72 | \n", - "small gtpase binding activity | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
73 | \n", - "GO:0043001 | \n", - "Golgi to plasma membrane protein transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
74 | \n", - "tyrosine kinase activity | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
75 | \n", - "GO:0009986 | \n", - "cell surface | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
76 | \n", - "cytoskeletal protein binding activity | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "7.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
77 | \n", - "GO:0005783 | \n", - "endoplasmic reticulum | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "8.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
78 | \n", - "GO:0032456 | \n", - "endocytic recycling | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "9.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
79 | \n", - "GO:0051260 | \n", - "protein homooligomerization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "11.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
80 | \n", - "GO:0097320 | \n", - "plasma membrane tubulation | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "12.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
81 | \n", - "GO:0010468 | \n", - "regulation of gene expression | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "14.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
82 | \n", - "GO:0048010 | \n", - "vascular endothelial growth factor receptor signaling pathway | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "15.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
83 | \n", - "GO:0007010 | \n", - "cytoskeleton organization | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
84 | \n", - "GO:0016197 | \n", - "endosomal transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
85 | \n", - "GO:0007041 | \n", - "lysosomal transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "
86 | \n", - "g-protein signalling pathway | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "
87 | \n", - "mapk signalling pathway | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "
88 | \n", - "GO:0006631 | \n", - "fatty acid metabolic process | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "
89 | \n", - "calcium signalling pathway | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "
90 | \n", - "cell membrane composition and organization | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "
91 | \n", - "protein kinase signalling | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "
92 | \n", - "apoptosis regulation | \n", - "None | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "
93 | \n", - "GO:0140105 | \n", - "interleukin-10-mediated signaling pathway | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "
94 | \n", - "GO:0016363 | \n", - "nuclear matrix | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "
95 | \n", - "GO:0016579 | \n", - "protein deubiquitination | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "
96 | \n", - "GO:0007626 | \n", - "locomotory behavior | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "
97 | \n", - "GO:0008427 | \n", - "calcium-dependent protein kinase inhibitor activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "
98 | \n", - "GO:0050255 | \n", - "ribitol 2-dehydrogenase activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "
99 | \n", - "GO:0000228 | \n", - "nuclear chromosome | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "
100 | \n", - "GO:0001917 | \n", - "photoreceptor inner segment | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "7.0 | \n", - "
101 | \n", - "GO:0007165 | \n", - "signal transduction | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "8.0 | \n", - "
102 | \n", - "GO:0035578 | \n", - "azurophil granule lumen | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "9.0 | \n", - "
103 | \n", - "GO:0000976 | \n", - "transcription cis-regulatory region binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "10.0 | \n", - "
104 | \n", - "GO:0005576 | \n", - "extracellular region | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "13.0 | \n", - "NaN | \n", - "11.0 | \n", - "
105 | \n", - "GO:0009887 | \n", - "animal organ morphogenesis | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "12.0 | \n", - "
106 | \n", - "GO:0043085 | \n", - "positive regulation of catalytic activity | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "13.0 | \n", - "
107 | \n", - "GO:0042742 | \n", - "defense response to bacterium | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "14.0 | \n", - "
108 | \n", - "GO:0098655 | \n", - "monoatomic cation transmembrane transport | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "15.0 | \n", - "
109 | \n", - "GO:0006357 | \n", - "regulation of transcription by RNA polymerase II | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "0.0 | \n", - "NaN | \n", - "NaN | \n", - "
110 | \n", - "GO:0046872 | \n", - "metal ion binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "1.0 | \n", - "NaN | \n", - "NaN | \n", - "
111 | \n", - "GO:0016020 | \n", - "membrane | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "2.0 | \n", - "NaN | \n", - "NaN | \n", - "
112 | \n", - "GO:0005739 | \n", - "mitochondrion | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "3.0 | \n", - "NaN | \n", - "NaN | \n", - "
113 | \n", - "GO:0003723 | \n", - "RNA binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "4.0 | \n", - "NaN | \n", - "NaN | \n", - "
114 | \n", - "GO:0005615 | \n", - "extracellular space | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "5.0 | \n", - "NaN | \n", - "NaN | \n", - "
115 | \n", - "GO:0005829 | \n", - "cytosol | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "6.0 | \n", - "NaN | \n", - "NaN | \n", - "
116 | \n", - "GO:0042802 | \n", - "identical protein binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "7.0 | \n", - "NaN | \n", - "NaN | \n", - "
117 | \n", - "GO:0045944 | \n", - "positive regulation of transcription by RNA polymerase II | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "8.0 | \n", - "NaN | \n", - "NaN | \n", - "
118 | \n", - "GO:0005524 | \n", - "ATP binding | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "9.0 | \n", - "NaN | \n", - "NaN | \n", - "
119 | \n", - "GO:0070062 | \n", - "extracellular exosome | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "10.0 | \n", - "NaN | \n", - "NaN | \n", - "
120 | \n", - "GO:0005737 | \n", - "cytoplasm | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "12.0 | \n", - "NaN | \n", - "NaN | \n", - "
121 | \n", - "GO:0005634 | \n", - "nucleus | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "14.0 | \n", - "NaN | \n", - "NaN | \n", - "
122 | \n", - "GO:0005654 | \n", - "nucleoplasm | \n", - "False | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "NaN | \n", - "15.0 | \n", - "NaN | \n", - "NaN | \n", - "