{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":521973469,"defaultBranch":"main","name":"KmerAperture","ownerLogin":"moorembioinfo","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-08-06T14:48:06.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/6642283?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1704573410.0","currentOid":""},"activityList":{"items":[{"before":"b24c5f064f9d07390fa79a60ba8235e9df64e26a","after":"653533567276e33e8dac5950723dcf9871020743","ref":"refs/heads/main","pushedAt":"2023-12-05T23:14:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Drop pct identity and reimplement indel filter","shortMessageHtmlLink":"Drop pct identity and reimplement indel filter"}},{"before":"42d0ea9c9b9711574a331bc213808268d0d0feb4","after":"b24c5f064f9d07390fa79a60ba8235e9df64e26a","ref":"refs/heads/main","pushedAt":"2023-12-04T23:27:00.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge pull request #8 from moorembioinfo/parser\n\nBugfix dense SNPs major bug in alignment","shortMessageHtmlLink":"Merge pull request #8 from moorembioinfo/parser"}},{"before":"c5e9c3a4a7f13c72c2209018e5df05c65368ad1b","after":"171d02080ae2e4d89128809bdde32225f4acd5ee","ref":"refs/heads/parser","pushedAt":"2023-12-04T23:26:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Bugfix dense SNPs major bug in alignment. Successive SNPs incorrectly input","shortMessageHtmlLink":"Bugfix dense SNPs major bug in alignment. Successive SNPs incorrectly…"}},{"before":"f07fba69f4c9d80b61d75f9fa8d11d875d82da58","after":"42d0ea9c9b9711574a331bc213808268d0d0feb4","ref":"refs/heads/main","pushedAt":"2023-11-27T11:44:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"0c4cad19b32b9dcbf2072afd05b0a874919b6f99","after":"f07fba69f4c9d80b61d75f9fa8d11d875d82da58","ref":"refs/heads/main","pushedAt":"2023-11-27T11:44:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"53bd26311febccfcb0bf3bec48ad86f3a0575887","after":"0c4cad19b32b9dcbf2072afd05b0a874919b6f99","ref":"refs/heads/main","pushedAt":"2023-09-30T17:21:55.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge pull request #7 from moorembioinfo/parser\n\nsmall parser speedup, changed canonicalisation logic","shortMessageHtmlLink":"Merge pull request #7 from moorembioinfo/parser"}},{"before":"ba72d0449ec1036bfb317cc4a4fdd608a6a626cc","after":"c5e9c3a4a7f13c72c2209018e5df05c65368ad1b","ref":"refs/heads/parser","pushedAt":"2023-09-09T14:00:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"bugfix","shortMessageHtmlLink":"bugfix"}},{"before":null,"after":"ba72d0449ec1036bfb317cc4a4fdd608a6a626cc","ref":"refs/heads/parser","pushedAt":"2023-09-09T13:51:32.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Small speedup of parser","shortMessageHtmlLink":"Small speedup of parser"}},{"before":"3e5f52f8db4b0b7378f442f4214f07fccb05d79b","after":"53bd26311febccfcb0bf3bec48ad86f3a0575887","ref":"refs/heads/main","pushedAt":"2023-09-01T14:00:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaoloRibeca","name":"Paolo Ribeca","path":"/PaoloRibeca","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3910287?s=80&v=4"},"commit":{"message":"Link to preprint in README.md is now version-independent","shortMessageHtmlLink":"Link to preprint in README.md is now version-independent"}},{"before":null,"after":"3e5f52f8db4b0b7378f442f4214f07fccb05d79b","ref":"refs/heads/indels","pushedAt":"2023-05-25T13:21:31.195Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"1c13b0512ef38da8a1f233206ad705378372acb1","after":"3e5f52f8db4b0b7378f442f4214f07fccb05d79b","ref":"refs/heads/main","pushedAt":"2023-05-05T11:51:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"03489df30f068a57bb26b9af3685049adef4fcad","after":"1c13b0512ef38da8a1f233206ad705378372acb1","ref":"refs/heads/main","pushedAt":"2023-05-05T11:49:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Temp remove snpsonly","shortMessageHtmlLink":"Temp remove snpsonly"}},{"before":"2162169ac839757f9309adbd9ce64efe8aba41e3","after":"03489df30f068a57bb26b9af3685049adef4fcad","ref":"refs/heads/main","pushedAt":"2023-03-16T19:57:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"bugfix accessory output","shortMessageHtmlLink":"bugfix accessory output"}},{"before":"e97f005c7271b40ab133e43681041bfba5cc14a1","after":"2162169ac839757f9309adbd9ce64efe8aba41e3","ref":"refs/heads/main","pushedAt":"2023-03-16T17:00:54.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture …"}},{"before":"23604c33ad23d9210ff57e9991a1da5aa307527b","after":"e97f005c7271b40ab133e43681041bfba5cc14a1","ref":"refs/heads/main","pushedAt":"2023-03-14T17:45:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaoloRibeca","name":"Paolo Ribeca","path":"/PaoloRibeca","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3910287?s=80&v=4"},"commit":{"message":"In search of the Ground Truth","shortMessageHtmlLink":"In search of the Ground Truth"}},{"before":"9a58750eaa90854ddc1a416f6730df1eec9d03f9","after":"23604c33ad23d9210ff57e9991a1da5aa307527b","ref":"refs/heads/main","pushedAt":"2023-03-10T14:43:37.167Z","pushType":"push","commitsCount":2,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture …"}},{"before":"b2b4d0c3dd5c1681946b8f6d353793cd3d3e50c7","after":"9a58750eaa90854ddc1a416f6730df1eec9d03f9","ref":"refs/heads/main","pushedAt":"2023-03-10T14:40:18.299Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Filter dense sites","shortMessageHtmlLink":"Filter dense sites"}},{"before":"ce2af0c1968edac6ce4af65cadbb33b79e93953a","after":"b2b4d0c3dd5c1681946b8f6d353793cd3d3e50c7","ref":"refs/heads/main","pushedAt":"2023-03-09T20:36:48.105Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Major bugfix, counting SNPs after gaps inserted","shortMessageHtmlLink":"Major bugfix, counting SNPs after gaps inserted"}},{"before":"d14e6ee79ed83c480f746d76eb4208ad50e99bbe","after":"ce2af0c1968edac6ce4af65cadbb33b79e93953a","ref":"refs/heads/main","pushedAt":"2023-03-09T20:33:33.616Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Remove print statemnts","shortMessageHtmlLink":"Remove print statemnts"}},{"before":"89a7f5788137f09fb0373d3312c9214dffc84103","after":"d14e6ee79ed83c480f746d76eb4208ad50e99bbe","ref":"refs/heads/main","pushedAt":"2023-03-09T20:30:19.332Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Bugfix input","shortMessageHtmlLink":"Bugfix input"}},{"before":"cbf2a44e706333e9a10ef44ece10f8a5b7d720f4","after":"89a7f5788137f09fb0373d3312c9214dffc84103","ref":"refs/heads/main","pushedAt":"2023-03-09T20:19:07.358Z","pushType":"push","commitsCount":2,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture …"}},{"before":"cff5e67505b69977b04f06e66eca56ed5119a339","after":"cbf2a44e706333e9a10ef44ece10f8a5b7d720f4","ref":"refs/heads/main","pushedAt":"2023-03-09T11:16:25.909Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaoloRibeca","name":"Paolo Ribeca","path":"/PaoloRibeca","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3910287?s=80&v=4"},"commit":{"message":"Added parser option -c to concatenate sequences","shortMessageHtmlLink":"Added parser option -c to concatenate sequences"}},{"before":"447aaabd0dad83ee4459edf6333759e74ecc94aa","after":"cff5e67505b69977b04f06e66eca56ed5119a339","ref":"refs/heads/main","pushedAt":"2023-03-08T22:39:39.671Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"remove print","shortMessageHtmlLink":"remove print"}},{"before":"e454cf949e30ec6f17d04e4b365af596cd5a5b67","after":"447aaabd0dad83ee4459edf6333759e74ecc94aa","ref":"refs/heads/main","pushedAt":"2023-03-08T22:36:49.170Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Parallel output","shortMessageHtmlLink":"Parallel output"}},{"before":"d95a6321e2cc747521ab8aafe82b4bcaa96e82cf","after":null,"ref":"refs/heads/parallel","pushedAt":"2023-03-08T11:44:53.344Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"}},{"before":"22608c03a1011c6bda2a25760c4ddc3f8285f186","after":"e454cf949e30ec6f17d04e4b365af596cd5a5b67","ref":"refs/heads/main","pushedAt":"2023-03-08T11:42:00.881Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"0fcd00c9b3da91eacc4220e104779ef58e013b0d","after":"22608c03a1011c6bda2a25760c4ddc3f8285f186","ref":"refs/heads/main","pushedAt":"2023-03-08T11:40:38.819Z","pushType":"push","commitsCount":1,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Run main KmerAperture module in parallel","shortMessageHtmlLink":"Run main KmerAperture module in parallel"}},{"before":"fb6956f582bcaf8ecddbc0e073b57cff0fee81f1","after":"0fcd00c9b3da91eacc4220e104779ef58e013b0d","ref":"refs/heads/main","pushedAt":"2023-03-07T14:39:07.354Z","pushType":"push","commitsCount":3,"pusher":{"login":"moorembioinfo","name":"Matt Moore","path":"/moorembioinfo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6642283?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/moorembioinfo/KmerAperture …"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAADwhfN3gA","startCursor":null,"endCursor":null}},"title":"Activity · moorembioinfo/KmerAperture"}