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_pkgdown.yml
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/
_pkgdown.yml
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url: https://mrc-ide.github.io/monty
template:
bootstrap: 5
reference:
- title: Models
contents:
- monty_model
- monty_model_combine
- monty_model_split
- monty_model_function
- monty_model_properties
- subtitle: Functions for working with models
contents:
- monty_model_density
- monty_model_gradient
- monty_model_direct_sample
- subtitle: Example
contents:
- monty_example
- title: Domain specific language
contents:
- monty_dsl
- monty_dsl_error_explain
- monty_differentiation
- subtitle: Advanced
contents:
- monty_dsl_distributions
- monty_dsl_parse_distribution
- title: Draw samples from a model
contents:
- monty_sample
- monty_sample_continue
- subtitle: Samplers
contents:
- monty_sampler_random_walk
- monty_sampler_adaptive
- monty_sampler_hmc
- monty_sampler_nested_random_walk
- monty_sampler_nested_adaptive
- subtitle: Chain runners
contents:
- monty_runner_serial
- monty_runner_parallel
- monty_runner_simultaneous
- monty_runner_callr
- subtitle: Manually run chains
contents:
- monty_sample_manual_prepare
- monty_sample_manual_run
- monty_sample_manual_info
- monty_sample_manual_collect
- monty_sample_manual_cleanup
- monty_sample_manual_prepare_continue
- subtitle: Tools
contents:
- monty_observer
- monty_packer
- monty_packer_grouped
- monty_domain_expand
- monty_samples_thin
- with_trace_random
- title: Random numbers
- subsection: Create and manage random number state
contents:
- monty_rng_create
- monty_rng_state
- monty_rng_set_state
- monty_rng_jump
- monty_rng_long_jump
- subsection: Distribution functions
contents:
- monty_random_real
- monty_random_n_real
- monty_random_exponential_rate
- monty_random_n_exponential_rate
- monty_random_exponential_mean
- monty_random_n_exponential_mean
- monty_random_poisson
- monty_random_n_poisson
- monty_random_beta
- monty_random_n_beta
- monty_random_binomial
- monty_random_n_binomial
- monty_random_cauchy
- monty_random_n_cauchy
- monty_random_gamma_scale
- monty_random_n_gamma_scale
- monty_random_gamma_rate
- monty_random_n_gamma_rate
- monty_random_negative_binomial_prob
- monty_random_n_negative_binomial_prob
- monty_random_negative_binomial_mu
- monty_random_n_negative_binomial_mu
- monty_random_normal
- monty_random_n_normal
- monty_random_uniform
- monty_random_n_uniform
- monty_random_beta_binomial_prob
- monty_random_n_beta_binomial_prob
- monty_random_beta_binomial_ab
- monty_random_n_beta_binomial_ab
- monty_random_hypergeometric
- monty_random_n_hypergeometric
- monty_random_truncated_normal
- monty_random_n_truncated_normal
- monty_random_log_normal
- monty_random_n_log_normal
- monty_random_weibull
- monty_random_n_weibull
articles:
- title: Basics
navbar: Basics
contents:
- dsl
- samples
- title: Details
navbar: Details
contents:
- dsl-errors
- samplers
- migration