DESCRIPTION

Package: loosends
Title: Classifying loose ends in gGraphs
Version: 0.0.0.9000
Authors@R: 
	c(person("Julie", "Behr", email = "jbehr@nygenome.org", role = c("aut", "cre")),
	person("Marcin", "Imielinski", email = "mai9037@med.cornell.edu", role = c("aut"),
  ))
Description: What the package does (one paragraph).
Remotes: 
  bioc::3.10/GenomicRanges,
  bioc::3.10/rtracklayer,
  bioc::3.10/Rsamtools,
  bioc::3.10/Biostrings,
  github::mskilab/gUtils,
  github::mskilab/bamUtils,
  github::mskilab/RSeqLib,
  github::mskilab/gChain,
  github::mskilab/gTrack,
  github::mskilab/gGnome,
  github::mskilab/readsupport
Depends:
    R (>= 4.0.2),
    gUtils
Imports:
    data.table (>= 1.11),
    bamUtils,
    RSeqLib,
    gChain,
    gTrack,
    gGnome,
    readsupport,
    Biostrings,
    igraph,
    Matrix,
    reshape2,
    GenomicRanges,
    rtracklayer,
    Rsamtools,
    reshape2,
    BSgenome.Hsapiens.UCSC.hg19,
    stringr
License: GPL-3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Suggests: 
    testthat (>= 3.0.0)
Config/testthat/edition: 3