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Neuroconductor
2021-02-18
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Guides for Developers {#devguides}

  1. Preparing Your Package for Submission
  2. Changes to your Package

Frequently Asked Questions (FAQ)

Please visit the FAQ for information on how to begin.

Installation Guides {#install}

  1. Using the Windows Subsystem for Linux
  2. Installing devtools
  3. Installing ANTsR

Required/General Readings {#req}

  1. NIfTI Basics
  2. Viewing Data: Linked Viewers
  3. Resampling Images

Data

  1. Downloading Human Connectome Project Data
  2. Downloading Functional Connectomes Projects

General Tutorials {#tutorials}

Structural Imaging

  1. Brain Extraction
  2. Brain Extraction for CT
  3. Tissue-Class Segmentation
  4. Labeling Brain Structures
  5. Processing Within-Visit Structural MRI
  6. Hemorrhagic Stroke Segmentation in CT
  7. Cortical Thickness Estimation (NOT DONE)

fMRI

  1. Resting-State fMRI analysis using ANTsR
  2. Resting-State fMRI analysis using fslr
  3. Resting-State fMRI analysis using spm12r

DTI

  1. DTI analysis with fslr
  2. DTI analysis with Camino
  3. DTI analysis with Camino with HCP data

Disease-specific Tutorials

  1. Multiple Sclerosis Lesion Segmentation