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Update README.md
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ndierckx committed Aug 1, 2023
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9 changes: 2 additions & 7 deletions README.md
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Expand Up @@ -6,7 +6,7 @@ NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short cir
- UPDATED CONFIG FILE!
- Included a new feature "Reduce ambigious N's", which will avoid ambigious nucleotides by always choosing the majority during consensus calling.
- Fixed assembly metrics in batch mode
- Included "Output path" as variable option in batch mode
- Included "Output path" as variable option in batch mode
**04/02/21**
- UPDATED CONFIG FILE!
- Added an output directory option to the config file
Expand All @@ -19,12 +19,7 @@ NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short cir
- UPDATED CONFIG FILE!
- Improved heteroplasmy calling
- Improved organelle assembly
- NEW FUNCTION: It is now possible to extend a seed directly, this will not correct the given seed, so it may not have mismatches
**24/04/19**
- UPDATED CONFIG FILE!
- New heteroplasmy function (can link heteroplasmic mutations by local assembly)
- New batch function
- Small improvements in assembly
- NEW FUNCTION: It is now possible to extend a seed directly, this will not correct the given seed, so it may not have mismatches

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