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Warn about BIDS ID matching if dataset has imaging data #793

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alyssadai opened this issue Sep 26, 2024 · 1 comment
Open

Warn about BIDS ID matching if dataset has imaging data #793

alyssadai opened this issue Sep 26, 2024 · 1 comment
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documentation Changes only affect the documentation _flag:stale [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again

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@alyssadai
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At the moment, if a user annotates a non-BIDS ID column in their phenotypic TSV as the participant ID, but then wants to include BIDS data in their JSONLD at the CLI step, they will need to go back and 1) add a new column with BIDS IDs to their TSVs and 2) re-annotate the TSV. This is pretty annoying, so we should instead have a clear warning during annotation that if a dataset has BIDS data that needs to be harmonized (or maybe if the user knows they intend to BIDSify data?), they should first generate and add BIDS IDs to the TSV before proceeding w/ the annotation.

@alyssadai alyssadai added the documentation Changes only affect the documentation label Sep 26, 2024
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We want to keep our issues up to date and active. This issue hasn't seen any activity in the last 75 days.
We have applied the _flag:stale label to indicate that this issue should be reviewed again.
When you review, please reread the spec and then apply one of these three options:

  • prioritize: apply the flag:schedule label to suggest moving this issue into the backlog now
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  • archive: sometimes an issue has important information or ideas but we won't work on it soon. In this case
    apply the someday label to show that this won't be prioritized. The stalebot will ignore issues with this
    label in the future. Use sparingly!

@github-actions github-actions bot added the _flag:stale [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again label Dec 11, 2024
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