diff --git a/.github/workflows/coverage.yaml b/.github/workflows/coverage.yaml new file mode 100644 index 0000000..eb047a0 --- /dev/null +++ b/.github/workflows/coverage.yaml @@ -0,0 +1,37 @@ +name: CI + +on: + push: + branches: + - main + pull_request: + workflow_dispatch: + +jobs: + build-and-test: + runs-on: ubuntu-latest + steps: + - name: Checkout + uses: actions/checkout@v4 + - name: Set up Node.js environment + uses: actions/setup-node@v4.0.0 + with: + node-version: 16 + - name: Create .env file + run: | + echo -e "API_QUERY_URL=${{ vars.API_QUERY_URL }}\nIS_FEDERATION_API=${{ vars.IS_FEDERATION_API }}" > .env + - name: Install Dependencies + run: npm install + - name: Build the project + run: npm run build + - name: Run E2E and Component tests with coverage + run: npm run test:all + - name: Collect Coverage + run: npx nyc report --reporter=json + - name: Upload Coverage to Codecov + uses: codecov/codecov-action@v3 + with: + files: ./coverage/*.json + flags: e2e,component + fail_ci_if_error: true + verbose: true \ No newline at end of file diff --git a/cypress/downloads/dataset-level-results.tsv b/cypress/downloads/dataset-level-results.tsv new file mode 100644 index 0000000..615a771 --- /dev/null +++ b/cypress/downloads/dataset-level-results.tsv @@ -0,0 +1,3 @@ +DatasetID DatasetName PortalURI NumMatchingSubjects AvailableImageModalities +https://someportal.org/datasets/ds0001 some name 3 http://purl.org/nidash/nidm#FlowWeighted, http://purl.org/nidash/nidm#T1Weighted +https://someportal.org/datasets/ds0002 some coolname 5 http://purl.org/nidash/nidm#FlowWeighted, http://purl.org/nidash/nidm#T1Weighted \ No newline at end of file diff --git a/cypress/downloads/participant-level-results.tsv b/cypress/downloads/participant-level-results.tsv new file mode 100644 index 0000000..fdb2d6b --- /dev/null +++ b/cypress/downloads/participant-level-results.tsv @@ -0,0 +1,3 @@ +DatasetID SubjectID Age Sex Diagnosis Assessment SessionID SessionPath NumSessions Modality +https://someportal.org/datasets/ds0001 protected protected protected protected protected protected protected protected protected +https://someportal.org/datasets/ds0002 sub-04 35.0 http://purl.bioontology.org/ontology/SNOMEDCT/248153007 , , ses-nb04 /ds000011/sub-04 1 http://purl.org/nidash/nidm#T2Weighted, http://purl.org/nidash/nidm#T1Weighted, http://purl.org/nidash/nidm#FlowWeighted \ No newline at end of file diff --git a/cypress/plugins/index.js b/cypress/plugins/index.js new file mode 100644 index 0000000..907022a --- /dev/null +++ b/cypress/plugins/index.js @@ -0,0 +1,5 @@ +/* eslint-disable global-require */ +module.exports = (on, config) => { + require('@cypress/code-coverage/task')(on, config); + return config; +}; diff --git a/cypress/support/index.js b/cypress/support/index.js new file mode 100644 index 0000000..f568da8 --- /dev/null +++ b/cypress/support/index.js @@ -0,0 +1 @@ +import '@cypress/code-coverage/support'; diff --git a/nuxt.config.js b/nuxt.config.js index 56d055c..59e8894 100644 --- a/nuxt.config.js +++ b/nuxt.config.js @@ -41,7 +41,13 @@ export default { buildModules: [ // https://go.nuxtjs.dev/eslint '@nuxtjs/eslint-module', + '@nuxtjs/istanbul', ], + istanbul: { + // Only enable coverage for development to avoid impact on production build + // You can use environment variables to control this behavior as needed + enabled: true, + }, // Modules: https://go.nuxtjs.dev/config-modules modules: [ diff --git a/package-lock.json b/package-lock.json index 6e85954..badd5dc 100644 --- a/package-lock.json +++ b/package-lock.json @@ -22,6 +22,7 @@ }, "devDependencies": { "@babel/eslint-parser": "^7.23.3", + "@cypress/code-coverage": "^3.12.14", "@nuxtjs/eslint-config": "^12.0.0", "@nuxtjs/eslint-module": "^4.1.0", "cypress": "^13.6.1", @@ -2662,6 +2663,147 @@ "postcss-selector-parser": "^6.0.13" } }, + "node_modules/@cypress/code-coverage": { + "version": "3.12.14", + "resolved": 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"node": ">=8" + }, + "funding": { + "url": "https://github.com/chalk/ansi-styles?sponsor=1" + } + }, + "node_modules/@cypress/code-coverage/node_modules/chalk": { + "version": "4.1.2", + "resolved": "https://registry.npmjs.org/chalk/-/chalk-4.1.2.tgz", + "integrity": "sha512-oKnbhFyRIXpUuez8iBMmyEa4nbj4IOQyuhc/wy9kY7/WVPcwIO9VA668Pu8RkO7+0G76SLROeyw9CpQ061i4mA==", + "dev": true, + "dependencies": { + "ansi-styles": "^4.1.0", + "supports-color": "^7.1.0" + }, + "engines": { + "node": ">=10" + }, + "funding": { + "url": "https://github.com/chalk/chalk?sponsor=1" + } + }, + "node_modules/@cypress/code-coverage/node_modules/color-convert": { + "version": "2.0.1", + "resolved": "https://registry.npmjs.org/color-convert/-/color-convert-2.0.1.tgz", + "integrity": "sha512-RRECPsj7iu/xb5oKYcsFHSppFNnsj/52OVTRKb4zP5onXwVF3zVmmToNcOfGC+CRDpfK/U584fMg38ZHCaElKQ==", + "dev": true, + "dependencies": { + "color-name": "~1.1.4" + }, + "engines": { + "node": ">=7.0.0" + } + }, + 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"@nuxtjs/axios": "^5.13.6", "@nuxtjs/dotenv": "^1.4.1", "bootstrap": "^5.3.2",