BrainChop

BrainChop is a lightweight tool for brain segmentation that runs on pretty much everything.

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Installation

You can install BrainChop using pip:

pip install brainchop

Usage

To use BrainChop, run the following command:

brainchop input.nii.gz -o output.nii.gz

Where:

• input.nii.gz is your input NIfTI file
• output.nii.gz is the desired output file name

Requirements

• Python 3.6+
• tinygrad : our tiny and portable (but powerful) ML inference engine
• numpy : basic tensor operations
• nibabel : to read nifti files
• requests : to download models

License

This project is licensed under the MIT License.