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diff --git a/_collections/_biblio/andoh_low-cost_2009.md b/_collections/_biblio/architecture/architecture_andoh_low-cost_2009.md
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diff --git a/_collections/_biblio/andoh_modulation_2006.md b/_collections/_biblio/architecture/architecture_andoh_modulation_2006.md
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diff --git a/_collections/_biblio/andoh_priming_2008.md b/_collections/_biblio/architecture/architecture_andoh_priming_2008.md
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diff --git a/_collections/_biblio/andrade_detection_2001.md b/_collections/_biblio/architecture/architecture_andrade_detection_2001.md
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diff --git a/_collections/_biblio/auzias_disco:_2009.md b/_collections/_biblio/architecture/architecture_auzias_disco:_2009.md
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diff --git a/_collections/_biblio/auzias_multi-scale_2008.md b/_collections/_biblio/architecture/architecture_auzias_multi-scale_2008.md
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index 0000000..4800309
--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Nicole Avila et al.
+title: Inference of an Extended Short Fiber Bundle Atlas Using Sulcus-Based Constraints for a Diffeomorphic Inter-subject Alignment
+year: 2019
+type: inproceedings
+doi: 10.1007/978-3-030-05831-9_25
+booktitle: Computational Diffusion MRI
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/balzeau_what_2021.md b/_collections/_biblio/architecture/architecture_balzeau_what_2021.md
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index 0000000..439b97e
--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Justine Beaujoin et al.
+title: Post-mortem inference of the human hippocampal connectivity and microstructure using ultra-high field diffusion MRI at 11.7 T
+journal: Brain Structure and Function
+year: 2018
+type: article
+url: https -//doi.org/10.1007/s00429-018-1617-1
+doi: 10.1007/s00429-018-1617-1
+---
\ No newline at end of file
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index 0000000..132e8a3
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Audrey Bénézit et al.
+title: Organising white matter in a brain without corpus callosum fibres
+journal: Cortex; a Journal Devoted to the Study of the Nervous System and Behavior
+year: 2015
+type: article
+doi: 10.1016/j.cortex.2014.08.022
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/borne_patch-based_2018.md b/_collections/_biblio/architecture/architecture_borne_patch-based_2018.md
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diff --git a/_collections/_biblio/borst_folding_2014.md b/_collections/_biblio/architecture/architecture_borst_folding_2014.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Florence Bouhali et al.
+title: Anatomical connections of the visual word form area
+journal: The Journal of Neuroscience - The Official Journal of the Society for Neuroscience
+year: 2014
+type: article
+doi: 10.1523/JNEUROSCI.4918-13.2014
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/bouteloup_p2-277_2018.md b/_collections/_biblio/architecture/architecture_bouteloup_p2-277_2018.md
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diff --git a/_collections/_biblio/bouyeure_three-dimensional_2018.md b/_collections/_biblio/architecture/architecture_bouyeure_three-dimensional_2018.md
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Véronique Brion et al.
+title: Noise correction for HARDI and HYDI data obtained with multi-channel coils and sum of squares reconstruction - an anisotropic extension of the LMMSE
+journal: Magnetic Resonance Imaging
+year: 2013
+type: article
+doi: 10.1016/j.mri.2013.04.002
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/cachia_how_2018.md b/_collections/_biblio/architecture/architecture_cachia_how_2018.md
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diff --git a/_collections/_biblio/chabriat_clinical_1999.md b/_collections/_biblio/architecture/architecture_chabriat_clinical_1999.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Maëlig Chauvel et al.
+title: In vivo mapping of the deep and superficial white matter connectivity in the chimpanzee brain
+journal: NeuroImage
+year: 2023
+type: article
+url: https -//linkinghub.elsevier.com/retrieve/pii/S105381192300513X
+doi: 10.1016/j.neuroimage.2023.120362
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/coulon_quasi-isometric_2015.md b/_collections/_biblio/architecture/architecture_coulon_quasi-isometric_2015.md
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diff --git a/_collections/_biblio/coyle_cortical_2006.md b/_collections/_biblio/architecture/architecture_coyle_cortical_2006.md
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index 0000000..6559b00
--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Claire Cury et al.
+title: Incomplete Hippocampal Inversion - A Comprehensive MRI Study of Over 2000 Subjects
+journal: FRONTIERS IN NEUROANATOMY
+year: 2015
+type: article
+doi: 10.3389/fnana.2015.00160
+---
\ No newline at end of file
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+---
+cat: gaia
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+bestof: false
+author: Marc-Antoine d'Albis et al.
+title: Local structural connectivity is associated with social cognition in autism spectrum disorder
+journal: Brain - A Journal of Neurology
+year: 2018
+type: article
+doi: 10.1093/brain/awy275
+---
\ No newline at end of file
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: J. Dauguet et al.
+title: Three-dimensional reconstruction of stained histological slices and 3D non-linear registration with in-vivo MRI for whole baboon brain
+journal: J Neurosci Methods
+year: 2007
+type: article
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/de_vareilles_development_2023.md b/_collections/_biblio/architecture/architecture_de_vareilles_development_2023.md
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diff --git a/_collections/_biblio/de_vareilles_folding_2019.md b/_collections/_biblio/architecture/architecture_de_vareilles_folding_2019.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Jessica Dubois et al.
+title: Exploring the successive waves of cortical folding in the developing brain using MRI and spectral analysis of gyrification
+year: 2016
+type: inproceedings
+doi: 10.1109/ISBI.2016.7493259
+booktitle: 13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016
+---
\ No newline at end of file
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+---
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+subcat: architecture
+bestof: false
+author: Matthieu Gilson et al.
+title: Network analysis of whole-brain fMRI dynamics - A new framework based on dynamic communicability
+journal: NeuroImage
+year: 2019
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811919305889
+doi: 10.1016/j.neuroimage.2019.116007
+---
\ No newline at end of file
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+author: Kévin Ginsburger et al.
+title: Improving the Realism of White Matter Numerical Phantoms - A Step toward a Better Understanding of the Influence of Structural Disorders in Diffusion MRI
+journal: Frontiers in Physics
+year: 2018
+type: article
+url: https -//www.frontiersin.org/articles/10.3389/fphy.2018.00012
+doi: 10.3389/fphy.2018.00012
+---
\ No newline at end of file
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Kévin Ginsburger et al.
+title: MEDUSA - A GPU-based tool to create realistic phantoms of the brain microstructure using tiny spheres
+journal: NeuroImage
+year: 2019
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S105381191930151X
+doi: 10.1016/j.neuroimage.2019.02.055
+---
\ No newline at end of file
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+author: Isaac Goicovich et al.
+title: Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism
+journal: Frontiers in Neuroinformatics
+year: 2021
+type: article
+url: https -//www.frontiersin.org/articles/10.3389/fninf.2021.727859
+doi: 10.3389/fninf.2021.727859
+---
\ No newline at end of file
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+author: M. Guevara et al.
+title: Automatic segmentation of short association bundles using a new multi-subject atlas of the left hemisphere fronto-parietal brain connections
+journal: Conference proceedings - ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
+year: 2015
+type: article
+doi: 10.1109/EMBC.2015.7318390
+---
\ No newline at end of file
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+---
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+author: M. Guevara et al.
+title: Creation of a whole brain short association bundle atlas using a hybrid approach.
+year: 2016
+type: inproceedings
+doi: 10.1109/EMBC.2016.7590899
+---
\ No newline at end of file
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+author: Miguel Guevara et al.
+title: Disentangling the variability of the superficial white matter organization using regional-tractogram-based population stratification
+journal: NeuroImage
+year: 2022
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811922003214
+doi: 10.1016/j.neuroimage.2022.119197
+---
\ No newline at end of file
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+type: article
+doi: 10.1016/j.neuroimage.2016.11.066
+---
\ No newline at end of file
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+title: Evaluation of amyloid status in a cohort of elderly individuals with memory complaints - validation of the method of quantification and determination of positivity thresholds
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+year: 2018
+type: article
+url: https -//doi.org/10.1007/s12149-017-1221-0
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+---
\ No newline at end of file
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+title: Imaging the aging brain - study design and baseline findings of the SENIOR cohort
+journal: Alzheimer's Research \& Therapy
+year: 2020
+type: article
+url: https -//alzres.biomedcentral.com/articles/10.1186/s13195-020-00642-1
+doi: 10.1186/s13195-020-00642-1
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/hanon_plasma_2022.md b/_collections/_biblio/architecture/architecture_hanon_plasma_2022.md
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diff --git a/_collections/_biblio/harvey_increased_2021.md b/_collections/_biblio/architecture/architecture_harvey_increased_2021.md
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diff --git a/_collections/_biblio/he_fiveyear_2021.md b/_collections/_biblio/architecture/architecture_he_fiveyear_2021.md
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diff --git a/_collections/_biblio/herve_shape_2005.md b/_collections/_biblio/architecture/architecture_herve_shape_2005.md
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diff --git a/_collections/_biblio/hozer_lithium_2021.md b/_collections/_biblio/architecture/architecture_hozer_lithium_2021.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Isaías Huerta et al.
+title: Inter-Subject Clustering of Brain Fibers from Whole-Brain Tractography
+year: 2020
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/9175342
+doi: 10.1109/EMBC44109.2020.9175342
+booktitle: 2020 42nd Annual International Conference of the IEEE Engineering in Medicine \& Biology Society (EMBC)
+---
\ No newline at end of file
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--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Ellen Ji et al.
+title: Increased and Decreased Superficial White Matter Structural Connectivity in Schizophrenia and Bipolar Disorder
+journal: Schizophrenia Bulletin
+year: 2019
+type: article
+url: https -//doi.org/10.1093/schbul/sbz015
+doi: 10.1093/schbul/sbz015
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/jouvent_longitudinal_2012.md b/_collections/_biblio/architecture/architecture_jouvent_longitudinal_2012.md
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diff --git a/_collections/_biblio/jouvent_prediction_2016.md b/_collections/_biblio/architecture/architecture_jouvent_prediction_2016.md
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diff --git a/_collections/_biblio/jouvent_shape_2016.md b/_collections/_biblio/architecture/architecture_jouvent_shape_2016.md
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Slim Karkar et al.
+title: Genome-wide haplotype association study in imaging genetics using whole-brain sulcal openings of 16,304 UK Biobank subjects
+journal: European Journal of Human Genetics
+year: 2021
+type: article
+url: https -//www.nature.com/articles/s41431-021-00827-8
+doi: 10.1038/s41431-021-00827-8
+---
\ No newline at end of file
diff --git a/_collections/_biblio/katz_similar_2016-1.md b/_collections/_biblio/architecture/architecture_katz_similar_2016-1.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: J. Katz et al.
+title: Similar white matter but opposite grey matter changes in schizophrenia and high-functioning autism
+journal: Acta Psychiatrica Scandinavica
+year: 2016
+type: article
+doi: 10.1111/acps.12579
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/kezele_importance_2009.md b/_collections/_biblio/architecture/architecture_kezele_importance_2009.md
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diff --git a/_collections/_biblio/kezele_mean_2008.md b/_collections/_biblio/architecture/architecture_kezele_mean_2008.md
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diff --git a/_collections/_biblio/kochunov_genetic_2007.md b/_collections/_biblio/architecture/architecture_kochunov_genetic_2007.md
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diff --git a/_collections/_biblio/kochunov_relationship_2007.md b/_collections/_biblio/architecture/architecture_kochunov_relationship_2007.md
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diff --git a/_collections/_biblio/labra_comparative_2023.md b/_collections/_biblio/architecture/architecture_labra_comparative_2023.md
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Nicole Labra et al.
+title: Fast Automatic Segmentation of White Matter Streamlines Based on a Multi-Subject Bundle Atlas
+journal: Neuroinformatics
+year: 2017
+type: article
+doi: 10.1007/s12021-016-9316-7
+---
\ No newline at end of file
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Nicole Labra et al.
+title: GPU-based acceleration of an automatic white matter segmentation algorithm using CUDA
+journal: Conference proceedings - ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
+year: 2013
+type: article
+doi: 10.1109/EMBC.2013.6609444
+---
\ No newline at end of file
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Yann Le Guen et al.
+title: Enhancer Locus in ch14q23.1 Modulates Brain Asymmetric Temporal Regions Involved in Language Processing
+journal: Cerebral Cortex
+year: 2020
+type: article
+url: https -//doi.org/10.1093/cercor/bhaa112
+doi: 10.1093/cercor/bhaa112
+---
\ No newline at end of file
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+cat: gaia
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+bestof: false
+author: Yann Le Guen et al.
+title: eQTL of KCNK2 regionally influences the brain sulcal widening - evidence from 15,597 UK Biobank participants with neuroimaging data
+journal: Brain Structure and Function
+year: 2019
+type: article
+url: https -//doi.org/10.1007/s00429-018-1808-9
+doi: 10.1007/s00429-018-1808-9
+---
\ No newline at end of file
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@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Yann Le Guen et al.
+title: Genetic Influence on the Sulcal Pits - On the Origin of the First Cortical Folds
+journal: Cerebral Cortex
+year: 2018
+type: article
+url: https -//doi.org/10.1093/cercor/bhx098
+doi: 10.1093/cercor/bhx098
+---
\ No newline at end of file
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Yann Le Guen et al.
+title: Heritability of surface area and cortical thickness - a comparison between the Human Connectome Project and the UK Biobank dataset
+year: 2019
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/8759539
+doi: 10.1109/ISBI.2019.8759539
+booktitle: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)
+---
\ No newline at end of file
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new file mode 100644
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+author: J. Lebenberg et al.
+title: A framework based on sulcal constraints to align preterm, infant and adult human brain images acquired in vivo and post mortem
+journal: Brain Structure and Function
+year: 2018
+type: article
+url: https -//doi.org/10.1007/s00429-018-1735-9
+doi: 10.1007/s00429-018-1735-9
+---
\ No newline at end of file
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+author: J. Lebenberg et al.
+title: Mapping the asynchrony of cortical maturation in the infant brain - A MRI multi-parametric clustering approach
+journal: NeuroImage
+year: 2019
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811918306372
+doi: 10.1016/j.neuroimage.2018.07.022
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/lefevre_surface_2013-1.md b/_collections/_biblio/architecture/architecture_lefevre_surface_2013-1.md
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diff --git a/_collections/_biblio/lefevre_surface_2013.md b/_collections/_biblio/architecture/architecture_lefevre_surface_2013.md
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diff --git a/_collections/_biblio/lefranc_concomitant_2015.md b/_collections/_biblio/architecture/architecture_lefranc_concomitant_2015.md
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+author: Sandrine Lefranc et al.
+title: Groupwise connectivity-based parcellation of the whole human cortical surface using watershed-driven dimension reduction
+journal: Medical Image Analysis
+year: 2016
+type: article
+doi: 10.1016/j.media.2016.01.003
+---
\ No newline at end of file
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+bestof: false
+author: Herve Lemaitre et al.
+title: Genetic variations within human gained enhancer elements affect human brain sulcal morphology
+journal: NeuroImage
+year: 2023
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811922008941
+doi: 10.1016/j.neuroimage.2022.119773
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/leroy_early_2011.md b/_collections/_biblio/architecture/architecture_leroy_early_2011.md
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+author: François Leroy et al.
+title: New human-specific brain landmark - the depth asymmetry of superior temporal sulcus
+journal: Proceedings of the National Academy of Sciences of the United States of America
+year: 2015
+type: article
+doi: 10.1073/pnas.1412389112
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/lizarazu_neural_2021.md b/_collections/_biblio/architecture/architecture_lizarazu_neural_2021.md
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diff --git a/_collections/_biblio/architecture/architecture_lopez-lopez_coarse_2020.md b/_collections/_biblio/architecture/architecture_lopez-lopez_coarse_2020.md
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index 0000000..8d1d74c
--- /dev/null
+++ b/_collections/_biblio/architecture/architecture_lopez-lopez_coarse_2020.md
@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Narciso López-López et al.
+title: From Coarse to Fine-Grained Parcellation of the Cortical Surface Using a Fiber-Bundle Atlas
+journal: Frontiers in Neuroinformatics
+year: 2020
+type: article
+url: https -//www.frontiersin.org/articles/10.3389/fninf.2020.00032
+doi: 10.3389/fninf.2020.00032
+---
\ No newline at end of file
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index 0000000..cdaaf8f
--- /dev/null
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@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Narciso Lopez-Lopez et al.
+title: GeoSP - A parallel method for a cortical surface parcellation based on geodesic distance
+year: 2020
+type: inproceedings
+url: https -//ieeexplore.ieee.org/document/9175779/
+doi: 10.1109/EMBC44109.2020.9175779
+booktitle: 2020 42nd Annual International Conference of the IEEE Engineering in Medicine \& Biology Society (EMBC)
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/lu_biological_2021.md b/_collections/_biblio/architecture/architecture_lu_biological_2021.md
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diff --git a/_collections/_biblio/lu_cross-sectional_2020.md b/_collections/_biblio/architecture/architecture_lu_cross-sectional_2020.md
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diff --git a/_collections/_biblio/maltais_prospective_2020-1.md b/_collections/_biblio/architecture/architecture_maltais_prospective_2020-1.md
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diff --git a/_collections/_biblio/mangin_analysing_2008.md b/_collections/_biblio/architecture/architecture_mangin_analysing_2008.md
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diff --git a/_collections/_biblio/mangin_framework_2004.md b/_collections/_biblio/architecture/architecture_mangin_framework_2004.md
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diff --git a/_collections/_biblio/mangin_hdr_2005.md b/_collections/_biblio/architecture/architecture_mangin_hdr_2005.md
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diff --git a/_collections/_biblio/mangin_image_2007.md b/_collections/_biblio/architecture/architecture_mangin_image_2007.md
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diff --git a/_collections/_biblio/mangin_machine_2007.md b/_collections/_biblio/architecture/architecture_mangin_machine_2007.md
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diff --git a/_collections/_biblio/mangin_modern_2009.md b/_collections/_biblio/architecture/architecture_mangin_modern_2009.md
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diff --git a/_collections/_biblio/mangin_morphometry_2007.md b/_collections/_biblio/architecture/architecture_mangin_morphometry_2007.md
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diff --git a/_collections/_biblio/mangin_notitle_2010.md b/_collections/_biblio/architecture/architecture_mangin_notitle_2010.md
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diff --git a/_collections/_biblio/mangin_plis_2019.md b/_collections/_biblio/architecture/architecture_mangin_plis_2019.md
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diff --git a/_collections/_biblio/mangin_signal_2007.md b/_collections/_biblio/architecture/architecture_mangin_signal_2007.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: J.-F. Mangin et al.
+title: Spatial normalization of brain images and beyond
+journal: Medical Image Analysis
+year: 2016
+type: article
+doi: 10.1016/j.media.2016.06.008
+---
\ No newline at end of file
diff --git a/_collections/_biblio/mangin_statistical_2008.md b/_collections/_biblio/architecture/architecture_mangin_statistical_2008.md
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diff --git a/_collections/_biblio/mangin_structural_2007-1.md b/_collections/_biblio/architecture/architecture_mangin_structural_2007-1.md
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diff --git a/_collections/_biblio/mangin_structural_2007.md b/_collections/_biblio/architecture/architecture_mangin_structural_2007.md
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diff --git a/_collections/_biblio/mangin_structural_2010.md b/_collections/_biblio/architecture/architecture_mangin_structural_2010.md
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diff --git a/_collections/_biblio/mangin_sulci_2015.md b/_collections/_biblio/architecture/architecture_mangin_sulci_2015.md
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diff --git a/_collections/_biblio/mangin_sulcus_2015.md b/_collections/_biblio/architecture/architecture_mangin_sulcus_2015.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: J.-F. Mangin et al.
+title: Toward global tractography
+journal: Neuroimage
+year: 2013
+type: article
+doi: 10.1016/j.neuroimage.2013.04.009
+---
\ No newline at end of file
diff --git a/_collections/_biblio/mangin_variability_2007.md b/_collections/_biblio/architecture/architecture_mangin_variability_2007.md
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diff --git a/_collections/_biblio/mangin_variability_2008.md b/_collections/_biblio/architecture/architecture_mangin_variability_2008.md
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diff --git a/_collections/_biblio/mangin_variability_2010.md b/_collections/_biblio/architecture/architecture_mangin_variability_2010.md
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diff --git a/_collections/_biblio/mangin_vie_2011.md b/_collections/_biblio/architecture/architecture_mangin_vie_2011.md
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--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Linda Marrakchi-Kacem et al.
+title: Mapping cortico-striatal connectivity onto the cortical surface - a new tractography-based approach to study Huntington disease
+journal: PloS One
+year: 2013
+type: article
+doi: 10.1371/journal.pone.0053135
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/marrakchi-kacem_using_2009.md b/_collections/_biblio/architecture/architecture_marrakchi-kacem_using_2009.md
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diff --git a/_collections/_biblio/martinot_brain_2005-1.md b/_collections/_biblio/architecture/architecture_martinot_brain_2005-1.md
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diff --git a/_collections/_biblio/mendoza_convex_2023.md b/_collections/_biblio/architecture/architecture_mendoza_convex_2023.md
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: C. Mendoza et al.
+title: Enhanced Automatic Segmentation for Superficial White Matter Fiber Bundles for Probabilistic Tractography Datasets
+year: 2021
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/9630529
+doi: 10.1109/EMBC46164.2021.9630529
+booktitle: 2021 43rd Annual International Conference of the IEEE Engineering in Medicine \& Biology Society (EMBC)
+---
\ No newline at end of file
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Cristobal Mendoza et al.
+title: Superficial white matter shape characterization using hierarchical clustering and a multi-subject bundle atlas
+year: 2023
+type: inproceedings
+url: https -//www.spiedigitallibrary.org/conference-proceedings-of-spie/12567/2669738/Superficial-white-matter-shape-characterization-using-hierarchical-clustering-and-a/10.1117/12.2669738.full
+doi: 10.1117/12.2669738
+booktitle: 18th International Symposium on Medical Information Processing and Analysis
+---
\ No newline at end of file
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+---
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+author: Joaquín Molina et al.
+title: Group-wise cortical parcellation based on structural connectivity and hierarchical clustering
+year: 2023
+type: inproceedings
+url: https -//www.spiedigitallibrary.org/conference-proceedings-of-spie/12567/125670L/Group-wise-cortical-parcellation-based-on-structural-connectivity-and-hierarchical/10.1117/12.2670138.full
+doi: 10.1117/12.2670138
+booktitle: 18th International Symposium on Medical Information Processing and Analysis
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/molko_monitoring_2002.md b/_collections/_biblio/architecture/architecture_molko_monitoring_2002.md
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diff --git a/_collections/_biblio/moon_associations_2017.md b/_collections/_biblio/architecture/architecture_moon_associations_2017.md
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diff --git a/_collections/_biblio/moon_prospective_2018.md b/_collections/_biblio/architecture/architecture_moon_prospective_2018.md
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diff --git a/_collections/_biblio/muellner_altered_2015.md b/_collections/_biblio/architecture/architecture_muellner_altered_2015.md
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index 0000000..dedf18e
--- /dev/null
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@@ -0,0 +1,11 @@
+---
+cat: gaia
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+bestof: false
+author: Grégory Operto et al.
+title: CATI - A Large Distributed Infrastructure for the Neuroimaging of Cohorts
+journal: Neuroinformatics
+year: 2016
+type: article
+doi: 10.1007/s12021-016-9295-8
+---
\ No newline at end of file
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@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Ignacio Osorio et al.
+title: ABrainVis - an android brain image visualization tool
+journal: BioMedical Engineering OnLine
+year: 2021
+type: article
+url: https -//biomedical-engineering-online.biomedcentral.com/articles/10.1186/s12938-021-00909-0
+doi: 10.1186/s12938-021-00909-0
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/pappata_vivo_1996.md b/_collections/_biblio/architecture/architecture_pappata_vivo_1996.md
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diff --git a/_collections/_biblio/architecture/architecture_pardo_study_2013.md b/_collections/_biblio/architecture/architecture_pardo_study_2013.md
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index 0000000..da59de8
--- /dev/null
+++ b/_collections/_biblio/architecture/architecture_pardo_study_2013.md
@@ -0,0 +1,11 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Edison Pardo et al.
+title: Study of the variability of short association bundles on a HARDI database
+journal: Conference proceedings - ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
+year: 2013
+type: article
+doi: 10.1109/EMBC.2013.6609441
+---
\ No newline at end of file
diff --git a/_collections/_biblio/patel_comparison_2005.md b/_collections/_biblio/architecture/architecture_patel_comparison_2005.md
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diff --git a/_collections/_biblio/penttila_cortical_2009-1.md b/_collections/_biblio/architecture/architecture_penttila_cortical_2009-1.md
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diff --git a/_collections/_biblio/penttila_global_2008.md b/_collections/_biblio/architecture/architecture_penttila_global_2008.md
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diff --git a/_collections/_biblio/pepe_spectral_2015.md b/_collections/_biblio/architecture/architecture_pepe_spectral_2015.md
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diff --git a/_collections/_biblio/perrin_connectivity-based_2008.md b/_collections/_biblio/architecture/architecture_perrin_connectivity-based_2008.md
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diff --git a/_collections/_biblio/perrin_fiber_2005.md b/_collections/_biblio/architecture/architecture_perrin_fiber_2005.md
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diff --git a/_collections/_biblio/perrin_q-ball_2006.md b/_collections/_biblio/architecture/architecture_perrin_q-ball_2006.md
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diff --git a/_collections/_biblio/perrot_identifying_2008.md b/_collections/_biblio/architecture/architecture_perrot_identifying_2008.md
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diff --git a/_collections/_biblio/perrot_joint_2009.md b/_collections/_biblio/architecture/architecture_perrot_joint_2009.md
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diff --git a/_collections/_biblio/perus_effects_2022.md b/_collections/_biblio/architecture/architecture_perus_effects_2022.md
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diff --git a/_collections/_biblio/perus_impact_2023.md b/_collections/_biblio/architecture/architecture_perus_impact_2023.md
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diff --git a/_collections/_biblio/pinel_modulation_2001.md b/_collections/_biblio/architecture/architecture_pinel_modulation_2001.md
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diff --git a/_collections/_biblio/pizzagalli_reliability_2020.md b/_collections/_biblio/architecture/architecture_pizzagalli_reliability_2020.md
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diff --git a/_collections/_biblio/pizzagalli_sulcal-based_2018.md b/_collections/_biblio/architecture/architecture_pizzagalli_sulcal-based_2018.md
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diff --git a/_collections/_biblio/planche_clinical_2021.md b/_collections/_biblio/architecture/architecture_planche_clinical_2021.md
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diff --git a/_collections/_biblio/plaze_brain_2009.md b/_collections/_biblio/architecture/architecture_plaze_brain_2009.md
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diff --git a/_collections/_biblio/plaze_who_2015.md b/_collections/_biblio/architecture/architecture_plaze_who_2015.md
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diff --git a/_collections/_biblio/poo_brain_2023.md b/_collections/_biblio/architecture/architecture_poo_brain_2023.md
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--- /dev/null
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@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Elida Poo et al.
+title: Fiber bundles simulator using exponential curves to validate fiber clustering algorithms
+year: 2023
+type: inproceedings
+url: https -//www.spiedigitallibrary.org/conference-proceedings-of-spie/12567/125670J/Fiber-bundles-simulator-using-exponential-curves-to-validate-fiber-clustering/10.1117/12.2669811.full
+doi: 10.1117/12.2669811
+booktitle: 18th International Symposium on Medical Information Processing and Analysis
+---
\ No newline at end of file
diff --git a/_collections/_biblio/poupon_atlas-based_2009.md b/_collections/_biblio/architecture/architecture_poupon_atlas-based_2009.md
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diff --git a/_collections/_biblio/poupon_database_2006.md b/_collections/_biblio/architecture/architecture_poupon_database_2006.md
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diff --git a/_collections/_biblio/poupon_diffusion_2007.md b/_collections/_biblio/architecture/architecture_poupon_diffusion_2007.md
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diff --git a/_collections/_biblio/poupon_millimeter_2009.md b/_collections/_biblio/architecture/architecture_poupon_millimeter_2009.md
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diff --git a/_collections/_biblio/poupon_new_2007.md b/_collections/_biblio/architecture/architecture_poupon_new_2007.md
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diff --git a/_collections/_biblio/poupon_new_2008.md b/_collections/_biblio/architecture/architecture_poupon_new_2008.md
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diff --git a/_collections/_biblio/poupon_real-time_2008-1.md b/_collections/_biblio/architecture/architecture_poupon_real-time_2008-1.md
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diff --git a/_collections/_biblio/poupon_real-time_2008.md b/_collections/_biblio/architecture/architecture_poupon_real-time_2008.md
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diff --git a/_collections/_biblio/poupon_validation_2005.md b/_collections/_biblio/architecture/architecture_poupon_validation_2005.md
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diff --git a/_collections/_biblio/prieto_multiscale_2023.md b/_collections/_biblio/architecture/architecture_prieto_multiscale_2023.md
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diff --git a/_collections/_biblio/raffin_cross-sectional_2021.md b/_collections/_biblio/architecture/architecture_raffin_cross-sectional_2021.md
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--- /dev/null
+++ b/_collections/_biblio/architecture/architecture_ragis_sulcal_2005.md
@@ -0,0 +1,10 @@
+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: J. Régis et al.
+title: Sulcal root generic model - a hypothesis to overcome the variability of the human cortex folding patterns
+journal: Neurol Med Chir (Tokyo)
+year: 2005
+type: article
+---
\ No newline at end of file
diff --git a/_collections/_biblio/redolfi_head--head_2015.md b/_collections/_biblio/architecture/architecture_redolfi_head--head_2015.md
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diff --git a/_collections/_biblio/regy_association_2022.md b/_collections/_biblio/architecture/architecture_regy_association_2022.md
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diff --git a/_collections/_biblio/reiner_sulcal_2012.md b/_collections/_biblio/architecture/architecture_reiner_sulcal_2012.md
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diff --git a/_collections/_biblio/ringuenet_cingulate_2005.md b/_collections/_biblio/architecture/architecture_ringuenet_cingulate_2005.md
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diff --git a/_collections/_biblio/riviere_anatomist:_2011.md b/_collections/_biblio/architecture/architecture_riviere_anatomist:_2011.md
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diff --git a/_collections/_biblio/riviere_brainvisa:_2009.md b/_collections/_biblio/architecture/architecture_riviere_brainvisa:_2009.md
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diff --git a/_collections/_biblio/riviere_browsing_2022.md b/_collections/_biblio/architecture/architecture_riviere_browsing_2022.md
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diff --git a/_collections/_biblio/roca_sulcus-based_2015.md b/_collections/_biblio/architecture/architecture_roca_sulcus-based_2015.md
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diff --git a/_collections/_biblio/rodrigo_human_2007.md b/_collections/_biblio/architecture/architecture_rodrigo_human_2007.md
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diff --git a/_collections/_biblio/rodrigo_uncinate_2007.md b/_collections/_biblio/architecture/architecture_rodrigo_uncinate_2007.md
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+---
+cat: gaia
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+bestof: false
+author: C. Rolland et al.
+title: Exploring Microstructure Asymmetries in the Infant Brain Cortex - A Methodological Framework Combining Structural and Diffusion Mri
+year: 2019
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/8759421
+doi: 10.1109/ISBI.2019.8759421
+booktitle: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/roman_clustering_2017.md b/_collections/_biblio/architecture/architecture_roman_clustering_2017.md
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+---
+cat: gaia
+subcat: architecture
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+author: C. Roman et al.
+title: Short association bundle atlas based on inter-subject clustering from HARDI data
+year: 2016
+type: inproceedings
+doi: 10.1109/EMBC.2016.7591983
+booktitle: Conference proceedings - ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
+---
\ No newline at end of file
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@@ -0,0 +1,12 @@
+---
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+subcat: architecture
+bestof: false
+author: C. Román et al.
+title: Study Of Precentral-Postcentral Connections On Hcp Data Using Probabilistic Tractography And Fiber Clustering
+year: 2021
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/9434093
+doi: 10.1109/ISBI48211.2021.9434093
+booktitle: 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)
+---
\ No newline at end of file
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+---
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+bestof: false
+author: Claudio Román et al.
+title: Superficial white matter bundle atlas based on hierarchical fiber clustering over probabilistic tractography data
+journal: NeuroImage
+year: 2022
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811922006656
+doi: 10.1016/j.neuroimage.2022.119550
+---
\ No newline at end of file
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+author: Samuel Sarrazin et al.
+title: Corpus callosum area in patients with bipolar disorder with and without psychotic features - an international multicentre study
+journal: JOURNAL OF PSYCHIATRY \& NEUROSCIENCE
+year: 2015
+type: article
+doi: 10.1503/jpn.140262
+---
\ No newline at end of file
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@@ -0,0 +1,12 @@
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+author: Samuel Sarrazin et al.
+title: Higher in vivo Cortical Intracellular Volume Fraction Associated with Lithium Therapy in Bipolar Disorder - A Multicenter NODDI Study
+journal: Psychotherapy and Psychosomatics
+year: 2019
+type: article
+url: https -//doi.org/10.1159/000498854
+doi: 10.1159/000498854
+---
\ No newline at end of file
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+author: Samuel Sarrazin et al.
+title: A multicenter tractography study of deep white matter tracts in bipolar I disorder - psychotic features and interhemispheric disconnectivity
+journal: JAMA psychiatry
+year: 2014
+type: article
+doi: 10.1001/jamapsychiatry.2013.4513
+---
\ No newline at end of file
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+subcat: architecture
+bestof: false
+author: Samuel Sarrazin et al.
+title: Neuroimaging Evidence for Increased Neurite Density in Patients Taking Lithium - A Replication Study
+journal: Psychotherapy and Psychosomatics
+year: 2020
+type: article
+url: https -//doi.org/10.1159/000507556
+doi: 10.1159/000507556
+---
\ No newline at end of file
diff --git a/_collections/_biblio/architecture/architecture_schilling_tractography_2021.md b/_collections/_biblio/architecture/architecture_schilling_tractography_2021.md
new file mode 100644
index 0000000..59c628d
--- /dev/null
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+---
+cat: gaia
+subcat: architecture
+bestof: false
+author: Kurt Schilling et al.
+title: Tractography dissection variability - What happens when 42 groups dissect 14 white matter bundles on the same dataset?
+journal: NeuroImage
+year: 2021
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811921007758
+doi: 10.1016/j.neuroimage.2021.118502
+---
\ No newline at end of file
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similarity index 100%
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similarity index 100%
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similarity index 100%
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new file mode 100644
index 0000000..6952155
--- /dev/null
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+---
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+subcat: architecture
+bestof: false
+author: S. Senova et al.
+title: Optogenetic Tractography for anatomo-functional characterization of cortico-subcortical neural circuits in non-human primates
+journal: Scientific Reports
+year: 2018
+type: article
+doi: 10.1038/s41598-018-21486-8
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/simon_topographical_2002.md b/_collections/_biblio/architecture/architecture_simon_topographical_2002.md
similarity index 100%
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similarity index 100%
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diff --git a/_collections/_biblio/sun_defining_2008.md b/_collections/_biblio/architecture/architecture_sun_defining_2008.md
similarity index 100%
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diff --git a/_collections/_biblio/sun_effect_2012.md b/_collections/_biblio/architecture/architecture_sun_effect_2012.md
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--- /dev/null
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Zhong Sun et al.
+title: Shape analysis of the cingulum, uncinate and arcuate fasciculi in patients with bipolar disorder
+journal: Journal of psychiatry \& neuroscience - JPN
+year: 2017
+type: article
+---
\ No newline at end of file
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+cat: gaia
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+bestof: false
+author: Andrea Vázquez et al.
+title: Automatic group-wise whole-brain short association fiber bundle labeling based on clustering and cortical surface information
+journal: BioMedical Engineering OnLine
+year: 2020
+type: article
+url: https -//biomedical-engineering-online.biomedcentral.com/articles/10.1186/s12938-020-00786-z
+doi: 10.1186/s12938-020-00786-z
+---
\ No newline at end of file
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+bestof: false
+author: Andrea Vázquez et al.
+title: FFClust - Fast fiber clustering for large tractography datasets for a detailed study of brain connectivity
+journal: NeuroImage
+year: 2020
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811920305565
+doi: 10.1016/j.neuroimage.2020.117070
+---
\ No newline at end of file
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+cat: gaia
+subcat: architecture
+bestof: false
+author: Christopher Vergara et al.
+title: Group-Wise Cortical Surface Parcellation Based on Inter-Subject Fiber Clustering
+year: 2021
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/9631099
+doi: 10.1109/EMBC46164.2021.9631099
+booktitle: 2021 43rd Annual International Conference of the IEEE Engineering in Medicine \& Biology Society (EMBC)
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/wang_framework_2024.md b/_collections/_biblio/architecture/architecture_wang_framework_2024.md
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+cat: gaia
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+bestof: false
+author: Yulia Worbe et al.
+title: Altered structural connectivity of cortico-striato-pallido-thalamic networks in Gilles de la Tourette syndrome
+journal: BRAIN
+year: 2015
+type: article
+doi: 10.1093/brain/awu311
+---
\ No newline at end of file
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index 0000000..d09d5ee
--- /dev/null
+++ b/_collections/_biblio/ginkgo/ginkgo_assaf_connect_2013.md
@@ -0,0 +1,11 @@
+---
+cat: gaia
+subcat: ginkgo
+bestof: false
+author: Yaniv Assaf et al.
+title: The CONNECT project - Combining macro- and micro-structure
+journal: Neuroimage
+year: 2013
+type: article
+doi: 10.1016/j.neuroimage.2013.05.055
+---
\ No newline at end of file
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diff --git a/_collections/_biblio/gori_joint_2015.md b/_collections/_biblio/ginkgo/ginkgo_gori_joint_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/gori_parsimonious_2016.md b/_collections/_biblio/ginkgo/ginkgo_gori_parsimonious_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/gori_prototype_2014.md b/_collections/_biblio/ginkgo/ginkgo_gori_prototype_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/gramfort_denoising_2014.md b/_collections/_biblio/ginkgo/ginkgo_gramfort_denoising_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/guevara_automatic_2015.md b/_collections/_biblio/ginkgo/ginkgo_guevara_automatic_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/guevara_creation_2016.md b/_collections/_biblio/ginkgo/ginkgo_guevara_creation_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/guevara_disentangling_2022.md b/_collections/_biblio/ginkgo/ginkgo_guevara_disentangling_2022.md
similarity index 100%
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diff --git a/_collections/_biblio/guevara_reproducibility_2017.md b/_collections/_biblio/ginkgo/ginkgo_guevara_reproducibility_2017.md
similarity index 100%
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diff --git a/_collections/_biblio/haeger_imaging_2020.md b/_collections/_biblio/ginkgo/ginkgo_haeger_imaging_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/herlin_cross-subject_2023.md b/_collections/_biblio/ginkgo/ginkgo_herlin_cross-subject_2023.md
similarity index 100%
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diff --git a/_collections/_biblio/houenou_cytomegalovirus_2014.md b/_collections/_biblio/ginkgo/ginkgo_houenou_cytomegalovirus_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/houenou_multilevel_2017.md b/_collections/_biblio/ginkgo/ginkgo_houenou_multilevel_2017.md
similarity index 100%
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diff --git a/_collections/_biblio/huerta_inter-subject_2020.md b/_collections/_biblio/ginkgo/ginkgo_huerta_inter-subject_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/ji_alterations_2020.md b/_collections/_biblio/ginkgo/ginkgo_ji_alterations_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/ji_increased_2019.md b/_collections/_biblio/ginkgo/ginkgo_ji_increased_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/ji_t240_2018.md b/_collections/_biblio/ginkgo/ginkgo_ji_t240_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/kaden_diffeomorphic_2018.md b/_collections/_biblio/ginkgo/ginkgo_kaden_diffeomorphic_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/katz_similar_2016.md b/_collections/_biblio/ginkgo/ginkgo_katz_similar_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/kulikova_multi-parametric_2015.md b/_collections/_biblio/ginkgo/ginkgo_kulikova_multi-parametric_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/kulikova_new_2016.md b/_collections/_biblio/ginkgo/ginkgo_kulikova_new_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/labra_fast_2017.md b/_collections/_biblio/ginkgo/ginkgo_labra_fast_2017.md
similarity index 100%
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diff --git a/_collections/_biblio/labra_gpu-based_2013.md b/_collections/_biblio/ginkgo/ginkgo_labra_gpu-based_2013.md
similarity index 100%
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diff --git a/_collections/_biblio/labra_interactive_2014.md b/_collections/_biblio/ginkgo/ginkgo_labra_interactive_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/laidi_cerebellar_2015.md b/_collections/_biblio/ginkgo/ginkgo_laidi_cerebellar_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/lebenberg_framework_2018.md b/_collections/_biblio/ginkgo/ginkgo_lebenberg_framework_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/lebenberg_mapping_2019.md b/_collections/_biblio/ginkgo/ginkgo_lebenberg_mapping_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/lechanoine_wikibrainstem_2021.md b/_collections/_biblio/ginkgo/ginkgo_lechanoine_wikibrainstem_2021.md
similarity index 100%
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diff --git a/_collections/_biblio/lefranc_groupwise_2016.md b/_collections/_biblio/ginkgo/ginkgo_lefranc_groupwise_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/lehericy_7_2014.md b/_collections/_biblio/ginkgo/ginkgo_lehericy_7_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/lepore_identification_2019.md b/_collections/_biblio/ginkgo/ginkgo_lepore_identification_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/leroi_simultaneous_2018.md b/_collections/_biblio/ginkgo/ginkgo_leroi_simultaneous_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/leroy_new_2015.md b/_collections/_biblio/ginkgo/ginkgo_leroy_new_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/li_numerical_2014.md b/_collections/_biblio/ginkgo/ginkgo_li_numerical_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/linke_impaired_2013.md b/_collections/_biblio/ginkgo/ginkgo_linke_impaired_2013.md
similarity index 100%
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diff --git a/_collections/_biblio/lopez-lopez_coarse_2020.md b/_collections/_biblio/ginkgo/ginkgo_lopez-lopez_coarse_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/lopez-lopez_cortical_2019.md b/_collections/_biblio/ginkgo/ginkgo_lopez-lopez_cortical_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/lopez-lopez_geosp_2020.md b/_collections/_biblio/ginkgo/ginkgo_lopez-lopez_geosp_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/lyoubi-idrissi_diffusion_2017.md b/_collections/_biblio/ginkgo/ginkgo_lyoubi-idrissi_diffusion_2017.md
similarity index 100%
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diff --git a/_collections/_biblio/magalhaes_white_2017.md b/_collections/_biblio/ginkgo/ginkgo_magalhaes_white_2017.md
similarity index 100%
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diff --git a/_collections/_biblio/mangin_spatial_2016.md b/_collections/_biblio/ginkgo/ginkgo_mangin_spatial_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/mangin_toward_2013.md b/_collections/_biblio/ginkgo/ginkgo_mangin_toward_2013.md
similarity index 100%
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diff --git a/_collections/_biblio/marrakchi-kacem_mapping_2013.md b/_collections/_biblio/ginkgo/ginkgo_marrakchi-kacem_mapping_2013.md
similarity index 100%
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diff --git a/_collections/_biblio/marrakchi-kacem_robust_2016.md b/_collections/_biblio/ginkgo/ginkgo_marrakchi-kacem_robust_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/mendoza_enhanced_2021.md b/_collections/_biblio/ginkgo/ginkgo_mendoza_enhanced_2021.md
similarity index 100%
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diff --git a/_collections/_biblio/mendoza_superficial_2023.md b/_collections/_biblio/ginkgo/ginkgo_mendoza_superficial_2023.md
similarity index 100%
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diff --git a/_collections/_biblio/mohammadi_probastem_2023.md b/_collections/_biblio/ginkgo/ginkgo_mohammadi_probastem_2023.md
similarity index 100%
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diff --git a/_collections/_biblio/molina_group-wise_2023.md b/_collections/_biblio/ginkgo/ginkgo_molina_group-wise_2023.md
similarity index 100%
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diff --git a/_collections/_biblio/moulton_connectivity_2019.md b/_collections/_biblio/ginkgo/ginkgo_moulton_connectivity_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/nabulsi_aberrant_2022.md b/_collections/_biblio/ginkgo/ginkgo_nabulsi_aberrant_2022.md
similarity index 100%
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diff --git a/_collections/_biblio/nguyen_parameter_2015.md b/_collections/_biblio/ginkgo/ginkgo_nguyen_parameter_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/operto_cati:_2016.md b/_collections/_biblio/ginkgo/ginkgo_operto_cati:_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/osorio_abrainvis_2021.md b/_collections/_biblio/ginkgo/ginkgo_osorio_abrainvis_2021.md
similarity index 100%
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diff --git a/_collections/_biblio/pagnamenta_defective_2019.md b/_collections/_biblio/ginkgo/ginkgo_pagnamenta_defective_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/pardo_study_2013.md b/_collections/_biblio/ginkgo/ginkgo_pardo_study_2013.md
similarity index 100%
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diff --git a/_collections/_biblio/pinel_functional_2019.md b/_collections/_biblio/ginkgo/ginkgo_pinel_functional_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/pinel_genetic_2015.md b/_collections/_biblio/ginkgo/ginkgo_pinel_genetic_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/pinto_stringent_2018.md b/_collections/_biblio/ginkgo/ginkgo_pinto_stringent_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/poo_fiber_2023.md b/_collections/_biblio/ginkgo/ginkgo_poo_fiber_2023.md
similarity index 100%
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diff --git a/_collections/_biblio/popov_length-dependent_nodate.md b/_collections/_biblio/ginkgo/ginkgo_popov_length-dependent_nodate.md
similarity index 100%
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diff --git a/_collections/_biblio/pyatigorskaya_comparative_2018.md b/_collections/_biblio/ginkgo/ginkgo_pyatigorskaya_comparative_2018.md
similarity index 100%
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diff --git a/_collections/_biblio/pyatigorskaya_medulla_2016.md b/_collections/_biblio/ginkgo/ginkgo_pyatigorskaya_medulla_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/pyatigorskaya_multimodal_2020.md b/_collections/_biblio/ginkgo/ginkgo_pyatigorskaya_multimodal_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/reuter_faconstructor_2019.md b/_collections/_biblio/ginkgo/ginkgo_reuter_faconstructor_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/rolland_exploring_2019.md b/_collections/_biblio/ginkgo/ginkgo_rolland_exploring_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/roman_effect_2019.md b/_collections/_biblio/ginkgo/ginkgo_roman_effect_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/roman_short_2016.md b/_collections/_biblio/ginkgo/ginkgo_roman_short_2016.md
similarity index 100%
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diff --git a/_collections/_biblio/roman_study_2021.md b/_collections/_biblio/ginkgo/ginkgo_roman_study_2021.md
similarity index 100%
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diff --git a/_collections/_biblio/roman_superficial_2022.md b/_collections/_biblio/ginkgo/ginkgo_roman_superficial_2022.md
similarity index 100%
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diff --git a/_collections/_biblio/sarrazin_corpus_2015.md b/_collections/_biblio/ginkgo/ginkgo_sarrazin_corpus_2015.md
similarity index 100%
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diff --git a/_collections/_biblio/sarrazin_higher_2019.md b/_collections/_biblio/ginkgo/ginkgo_sarrazin_higher_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/sarrazin_multicenter_2014.md b/_collections/_biblio/ginkgo/ginkgo_sarrazin_multicenter_2014.md
similarity index 100%
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diff --git a/_collections/_biblio/sarrazin_multicentric_2022.md b/_collections/_biblio/ginkgo/ginkgo_sarrazin_multicentric_2022.md
similarity index 100%
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diff --git a/_collections/_biblio/sarrazin_neuroimaging_2020.md b/_collections/_biblio/ginkgo/ginkgo_sarrazin_neuroimaging_2020.md
similarity index 100%
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diff --git a/_collections/_biblio/schilling_challenges_2019.md b/_collections/_biblio/ginkgo/ginkgo_schilling_challenges_2019.md
similarity index 100%
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diff --git a/_collections/_biblio/schilling_tractography_2021.md b/_collections/_biblio/ginkgo/ginkgo_schilling_tractography_2021.md
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\ No newline at end of file
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\ No newline at end of file
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+subcat: platform
+bestof: false
+author: Miguel Guevara et al.
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+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811922003214
+doi: 10.1016/j.neuroimage.2022.119197
+---
\ No newline at end of file
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+bestof: false
+author: Alexa Haeger et al.
+title: Imaging the aging brain - study design and baseline findings of the SENIOR cohort
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+type: article
+url: https -//alzres.biomedcentral.com/articles/10.1186/s13195-020-00642-1
+doi: 10.1186/s13195-020-00642-1
+---
\ No newline at end of file
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+cat: gaia
+subcat: platform
+bestof: false
+author: Ellen Ji et al.
+title: Alterations In Short-Range Structural Connectivity Across The Psychosis Spectrum - Findings From The B-Snip Study
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+type: article
+url: https -//academic.oup.com/schizophreniabulletin/article/46/Supplement_1/S97/5839281
+doi: 10.1093/schbul/sbaa031.226
+---
\ No newline at end of file
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+---
+cat: gaia
+subcat: platform
+bestof: false
+author: Ellen Ji et al.
+title: Increased and Decreased Superficial White Matter Structural Connectivity in Schizophrenia and Bipolar Disorder
+journal: Schizophrenia Bulletin
+year: 2019
+type: article
+url: https -//doi.org/10.1093/schbul/sbz015
+doi: 10.1093/schbul/sbz015
+---
\ No newline at end of file
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index 0000000..531b602
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+bestof: false
+author: Ellen Ji et al.
+title: T240. Relationship Between Cognitive Performance and Superficial White Matter Integrity in the Cingulate Cortex in Schizophrenia - A DWI Study Using a Novel Atlas
+journal: Biological Psychiatry
+year: 2018
+type: article
+url: https -//linkinghub.elsevier.com/retrieve/pii/S0006322318306796
+doi: 10.1016/j.biopsych.2018.02.577
+---
\ No newline at end of file
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similarity index 100%
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+author: Fahad Khalid et al.
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+year: 2023
+type: article
+url: https -//www.frontiersin.org/articles/10.3389/fmed.2023.1071447
+---
\ No newline at end of file
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similarity index 100%
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similarity index 100%
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+cat: gaia
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+author: Yann Le Guen et al.
+title: The chaotic morphology of the left superior temporal sulcus is genetically constrained
+journal: NeuroImage
+year: 2018
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S1053811918302568
+doi: 10.1016/j.neuroimage.2018.03.046
+---
\ No newline at end of file
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+bestof: false
+author: Yann Le Guen et al.
+title: eQTL of KCNK2 regionally influences the brain sulcal widening - evidence from 15,597 UK Biobank participants with neuroimaging data
+journal: Brain Structure and Function
+year: 2019
+type: article
+url: https -//doi.org/10.1007/s00429-018-1808-9
+doi: 10.1007/s00429-018-1808-9
+---
\ No newline at end of file
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+cat: gaia
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+bestof: false
+author: Yann Le Guen et al.
+title: Heritability of surface area and cortical thickness - a comparison between the Human Connectome Project and the UK Biobank dataset
+year: 2019
+type: inproceedings
+url: https -//ieeexplore.ieee.org/abstract/document/8759539
+doi: 10.1109/ISBI.2019.8759539
+booktitle: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)
+---
\ No newline at end of file
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similarity index 100%
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similarity index 100%
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similarity index 100%
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similarity index 100%
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similarity index 100%
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+author: Mathieu Maltais et al.
+title: Prospective associations between physical activity levels and white matter integrity in older adults - results from the MAPT study
+journal: Maturitas
+year: 2020
+type: article
+url: https -//www.sciencedirect.com/science/article/pii/S0378512220302425
+doi: 10.1016/j.maturitas.2020.04.012
+---
\ No newline at end of file
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+author: Mathieu Maltais et al.
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+year: 2020
+type: article
+url: https -//onlinelibrary.wiley.com/doi/abs/10.1111/jgs.16343
+doi: 10.1111/jgs.16343
+---
\ No newline at end of file
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+type: article
+url: https -//doi.org/10.1007/s10548-019-00734-8
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+---
\ No newline at end of file
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+year: 2020
+type: article
+url: https -//www.nature.com/articles/s41398-020-00894-3
+doi: 10.1038/s41398-020-00894-3
+---
\ No newline at end of file
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similarity index 100%
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similarity index 100%
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similarity index 100%
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+---
\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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+type: article
+doi: 10.1176/appi.ajp.2015.14101298
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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+---
\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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+title: Interpretable and stable prediction of schizophrenia on a large multisite dataset using machine learning with structured sparsity
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+type: inproceedings
+url: https -//ieeexplore.ieee.org/document/8423946/
+doi: 10.1109/PRNI.2018.8423946
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+title: Prediction of activation patterns preceding hallucinations in patients with schizophrenia using machine learning with structured sparsity
+journal: Human Brain Mapping
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+type: article
+url: http -//onlinelibrary.wiley.com/doi/10.1002/hbm.23953/abstract
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+title: Structured Sparse Principal Components Analysis With the TV-Elastic Net Penalty
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+title: Asynchrony of the early maturation of white matter bundles in healthy infants - quantitative landmarks revealed noninvasively by diffusion tensor imaging
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+title: Classification based on cortical folding patterns
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+title: Cooperative agents society organized as an irregular pyramid - A mammography segmentation application
+journal: Pattern Recognition Letters
+year: 2003
+type: article
+url: http -//www.sciencedirect.com/science/article/pii/S0167865503000771
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+author: Edouard Duchesnay et al.
+title: Different Types of White Matter Hyperintensities in CADASIL
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+year: 2018
+type: article
+doi: 10.3389/fneur.2018.00526
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+title: Feature selection and classification of imbalanced datasets - Application to PET images of children with autistic spectrum disorders
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+type: article
+url: http -//www.sciencedirect.com/science/article/pii/S105381191100499X
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+author: E. Duchesnay et al.
+title: Irregular adaptative pyramid of agents for segmentation to interpretation of image
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+booktitle: 2000 IEEE International Conference on Systems, Man, and Cybernetics
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+author: Edouard Duchesnay et al.
+title: Method for Developing an Information Prediction Device, Use Thereof, and Corresponding Storage Medium and Apparatus
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+type: patent
+url: https -//patentscope.wipo.int/search/en/detail.jsf?docId=WO2010103248
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+title: Méthodes de prédiction multivariées basées sur la neuroimagerie  - application aux maladies psychiatriques
+journal: Annales Médico-psychologiques, revue psychiatrique
+year: 2015
+type: article
+url: http -//www.sciencedirect.com/science/article/pii/S0003448715000621
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\ No newline at end of file
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\ No newline at end of file
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+url: https -//hal-cea.archives-ouvertes.fr/tel-03408786
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\ No newline at end of file
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new file mode 100644
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+author: E. Duchesnay et al.
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+author: Marco Duering et al.
+title: Strategic white matter tracts for processing speed deficits in age-related small vessel disease
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+type: article
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\ No newline at end of file
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+author: Benoit Dufumier et al.
+title: Conditional Alignment and Uniformity for Contrastive Learning with Continuous Proxy Labels
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+type: inproceedings
+url: https -//hal.telecom-paris.fr/hal-03523114
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\ No newline at end of file
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+author: Benoit Dufumier et al.
+title: Contrastive Learning with Continuous Proxy Meta-Data for 3D MRI Classification
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+type: inproceedings
+url: https -//link.springer.com/chapter/10.1007%2F978-3-030-87196-3_6
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diff --git a/_collections/_biblio/dufumier_exploring_2024.md b/_collections/_biblio/signature/signature_dufumier_exploring_2024.md
similarity index 95%
rename from _collections/_biblio/dufumier_exploring_2024.md
rename to _collections/_biblio/signature/signature_dufumier_exploring_2024.md
index 00a991b..a1f4823 100644
--- a/_collections/_biblio/dufumier_exploring_2024.md
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 cat: gaia
 subcat: signature
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 author: Benoit Dufumier et al.
 title: Exploring the potential of representation and transfer learning for anatomical neuroimaging - Application to psychiatry
 journal: NeuroImage
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 type: article
 url: https -//www.sciencedirect.com/science/article/pii/S1053811924001605
 doi: 10.1016/j.neuroimage.2024.120665
----
+---
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+booktitle: 40th International Conference on Machine Learning (ICML) 2023
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\ No newline at end of file
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--- a/_collections/_biblio/dufumier_openbhb_2022.md
+++ b/_collections/_biblio/signature/signature_dufumier_openbhb_2022.md
@@ -1,7 +1,7 @@
 ---
 cat: gaia
 subcat: signature
-bestof: true
+bestof: false
 author: Benoit Dufumier et al.
 title: OpenBHB - a Large-Scale Multi-Site Brain MRI Data-set for Age Prediction and Debiasing
 journal: NeuroImage
@@ -9,4 +9,4 @@ year: 2022
 type: article
 url: https -//www.sciencedirect.com/science/article/pii/S1053811922007522
 doi: 10.1016/j.neuroimage.2022.119637
----
+---
\ No newline at end of file
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+doi: 10.48550/arXiv.2206.01646
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\ No newline at end of file
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+title: Prediction of post-traumatic stress disorder in family members of ICU patients - a machine learning approach
+journal: Intensive Care Medicine
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+type: article
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+author: Yannis Elandaloussi et al.
+title: Understanding the relationship between cerebellar structure and social abilities
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+type: article
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+author: Pauline Favre et al.
+title: Widespread white matter microstructural abnormalities in bipolar disorder - evidence from mega- and meta-analyses across 3033 individuals
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+url: https -//www.nature.com/articles/s41386-019-0485-6
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+title: Comparison of Features for Voxel-Based Analysis and Classification of Anatomical Neuroimaging Data
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+doi: 10.1016/j.biopsych.2020.02.1181
+---
\ No newline at end of file
diff --git a/_collections/_biblio/signature/signature_sun_defining_2008.md b/_collections/_biblio/signature/signature_sun_defining_2008.md
new file mode 100644
index 0000000..94d01c1
--- /dev/null
+++ b/_collections/_biblio/signature/signature_sun_defining_2008.md
@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: signature
+bestof: false
+author: Zhong Sun et al.
+title: Defining cortical sulcus patterns using partial clustering based on bootstrap and bagging
+year: 2008
+type: inproceedings
+url: http -//ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4541325
+doi: 10.1109/ISBI.2008.4541325
+booktitle: 2008 5th IEEE International Symposium on Biomedical Imaging - From Nano to Macro
+---
\ No newline at end of file
diff --git a/_collections/_biblio/signature/signature_teillac_colocalization_2016.md b/_collections/_biblio/signature/signature_teillac_colocalization_2016.md
new file mode 100644
index 0000000..18ab15f
--- /dev/null
+++ b/_collections/_biblio/signature/signature_teillac_colocalization_2016.md
@@ -0,0 +1,12 @@
+---
+cat: gaia
+subcat: signature
+bestof: false
+author: Achille Teillac et al.
+title: Colocalization of Functional Activity and Neurite Density Within Cortical Areas
+year: 2016
+type: inproceedings
+url: https -//link.springer.com/chapter/10.1007/978-3-319-54130-3_15
+doi: 10.1007/978-3-319-54130-3_15
+booktitle: Computational Diffusion MRI
+---
\ No newline at end of file
diff --git a/_collections/_biblio/signature/signature_thirion_inverse_2006.md b/_collections/_biblio/signature/signature_thirion_inverse_2006.md
new file mode 100644
index 0000000..97be2c9
--- /dev/null
+++ b/_collections/_biblio/signature/signature_thirion_inverse_2006.md
@@ -0,0 +1,11 @@
+---
+cat: gaia
+subcat: signature
+bestof: false
+author: Bertrand Thirion et al.
+title: Inverse retinotopy - inferring the visual content of images from brain activation patterns
+journal: NeuroImage
+year: 2006
+type: article
+doi: 10.1016/j.neuroimage.2006.06.062
+---
\ No newline at end of file
diff --git a/_collections/_biblio/signature/signature_thirion_reading_2005.md b/_collections/_biblio/signature/signature_thirion_reading_2005.md
new file mode 100644
index 0000000..04a4429
--- /dev/null
+++ b/_collections/_biblio/signature/signature_thirion_reading_2005.md
@@ -0,0 +1,10 @@
+---
+cat: gaia
+subcat: signature
+bestof: false
+author: Bertrand Thirion et al.
+title: Reading in the subject's mind - the case of low-level vision
+year: 2005
+type: inproceedings
+booktitle: Proc. 11th HBM CD-Rom Neuroimage vol 26 (1)
+---
\ No newline at end of file
diff --git a/_collections/_biblio/signature/signature_thirion_reading_2006.md b/_collections/_biblio/signature/signature_thirion_reading_2006.md
new file mode 100644
index 0000000..3ec941d
--- /dev/null
+++ b/_collections/_biblio/signature/signature_thirion_reading_2006.md
@@ -0,0 +1,10 @@
+---
+cat: gaia
+subcat: signature
+bestof: false
+author: Bertrand Thirion et al.
+title: Reading the brain visual system as an inverse problem
+year: 2006
+type: inproceedings
+booktitle: International Symposium on Biomedical Imaging (ISBI)
+---
\ No newline at end of file
diff --git a/biblio_other.md b/biblio_other.md
index 491ff59..dccb8a9 100644
--- a/biblio_other.md
+++ b/biblio_other.md
@@ -8,7 +8,7 @@ permalink: bibliography.html
 <h2> Publications of the {{site.title}} </h2>
 
 {% assign today = site.time | date: '%Y' %}
-{% assign biblio_sorted = site.biblio | sort: 'year' | reverse %}
+{% assign biblio_sorted = site.biblio | sort: 'subcat' | reverse %}
 
 {% for idx in (0..4) %}
 
@@ -18,9 +18,16 @@ permalink: bibliography.html
 <h3>{{year}}</h3>
 </div>
 
+{% assign section = "" %}
 <div class="bibliography">
   {% for entry in biblio_sorted %}
     {% if entry.year == year %}
+        {% if section != entry.subcat %}
+            {% assign section = entry.subcat %}
+            <div class="text-justify {{entry.cat}} {{entry.subcat}}">
+            <b>{{section|upcase}}:</b>
+            </div>
+        {% endif %}
     <li>
       <div class="text-justify {{entry.cat}} {{entry.subcat}}">
         &#x2022;
diff --git a/bibutils/bib2md b/bibutils/bib2md
index 5194636..91f2b59 100644
--- a/bibutils/bib2md
+++ b/bibutils/bib2md
@@ -18,11 +18,11 @@ import yaml
 doc = """
 Convert BIBTEX to MD.
 Must install first pybtex.
-python3 bib2md -i data/architecture_v-20240621.bib -o out/architecture -c gaia -s architecture
-python3 bib2md -i data/signature_v-20240621.bib -o out/signature -c gaia -s signature
-python3 bib2md -i data/brainomics_v-20240621.bib -o out/brainomics -c gaia -s brainomics
-python3 bib2md -i data/platform_v-20240621.bib -o out/platform -c gaia -s platform
-python3 bib2md -i data/ginkgo_v-20240621.bib -o out/ginkgo -c gaia -s ginkgo
+python3 bib2md -i data/architecture_v-20240621.bib -o ../_collections/_biblio/architecture -c gaia -s architecture
+python3 bib2md -i data/signature_v-20240621.bib -o ../_collections/_biblio/signature -c gaia -s signature
+python3 bib2md -i data/brainomics_v-20240621.bib -o ../_collections/_biblio/brainomics -c gaia -s brainomics
+python3 bib2md -i data/platform_v-20240621.bib -o ../_collections/_biblio/platform -c gaia -s platform
+python3 bib2md -i data/ginkgo_v-20240621.bib -o ../_collections/_biblio/ginkgo -c gaia -s ginkgo
 """
 parser = argparse.ArgumentParser(description=doc)
 parser.add_argument(
@@ -40,6 +40,11 @@ parser.add_argument(
 args = parser.parse_args()
 
 
+# Create output directory
+if not os.path.isdir(args.outdir):
+    os.mkdir(args.outdir)
+
+
 # Convert bib to yaml with pybtex-convert
 bibfile = os.path.join(args.outdir, "bib.yaml")
 cmd = ["pybtex-convert", args.infile,  bibfile]
@@ -61,7 +66,7 @@ for key, item in biblio.items():
     item["author"] = "{0} {1} et al.".format(
         item["author"][0]["first"],
         item["author"][0]["last"])
-    md_file = os.path.join(args.outdir, key + ".md")
+    md_file = os.path.join(args.outdir, f"{args.subcat}_{key}.md")
     content = ["---", f"cat: {args.cat}", f"subcat: {args.subcat}",
                "bestof: false"]
     for _key in ["author", "title", "journal", "year", "type", "url", "doi",
@@ -79,3 +84,6 @@ for key, item in biblio.items():
     with open(md_file, "wt") as of:
         of.write("\n".join(content))
     
+
+# Cleaning
+os.remove(bibfile)