test.yml

name: test

on:
  workflow_dispatch:
  pull_request:
  push:
    branches: [next, qa, main]
    tags: ['v*']

jobs:
  linux:
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -l {0}
    steps:
      - uses: actions/checkout@v3
      - uses: conda-incubator/setup-miniconda@v2
        with:
          auto-update-conda: true
          channels: conda-forge,defaults
          mamba-version: "*"
          environment-file: environment.yml
          cache-environment-key: ${{ runner.os }}-env-${{ hashFiles('**/environment.yml') }}
          cache-downloads-key: ${{ runner.os }}-downloads-${{ hashFiles('**/environment.yml') }}
      - name: install additional dependencies
        run: |
          echo "installing additional dependencies if cannot be installed from conda"
      - name: run tests
        run: |
          echo "running tests"
          python -m pytest --cov=pystog --cov-report=xml --cov-report=term-missing tests/
      - name: upload coverage to codecov
        uses: codecov/codecov-action@v4
        with:
          token: ${{ secrets.CODECOV_TOKEN }}
      - name: build conda package
        run: |
          # test that the conda package builds
          cd conda.recipe
          echo "versioningit $(versioningit ../)"
          # conda channels could have been defined in the conda-incubator, but you can copy/paste the lines
          # below to build the conda package in your local machine
          CHANNELS="--channel mantid/label/main --channel conda-forge"
          VERSION=$(versioningit ../) conda mambabuild $CHANNELS --output-folder . .
          conda verify noarch/pystog*.tar.bz2