diff --git a/apps/files_versions/lib/Command/CleanUp.php b/apps/files_versions/lib/Command/CleanUp.php
index d7bb4caa483ff..8ac0c2c03c21c 100644
--- a/apps/files_versions/lib/Command/CleanUp.php
+++ b/apps/files_versions/lib/Command/CleanUp.php
@@ -24,6 +24,7 @@
  */
 namespace OCA\Files_Versions\Command;
 
+use OCA\Files_Versions\Db\VersionsMapper;
 use OCP\Files\IRootFolder;
 use OCP\IUserBackend;
 use OCP\IUserManager;
@@ -45,7 +46,11 @@ class CleanUp extends Command {
 	 * @param IRootFolder $rootFolder
 	 * @param IUserManager $userManager
 	 */
-	public function __construct(IRootFolder $rootFolder, IUserManager $userManager) {
+	public function __construct(
+		IRootFolder $rootFolder,
+		IUserManager $userManager,
+		protected VersionsMapper $versionMapper,
+	) {
 		parent::__construct();
 		$this->userManager = $userManager;
 		$this->rootFolder = $rootFolder;
@@ -130,6 +135,9 @@ protected function deleteVersions(string $user, string $path = null): void {
 		\OC_Util::tearDownFS();
 		\OC_Util::setupFS($user);
 
+		$userHomeStorageId = $this->rootFolder->getUserFolder($user)->getStorage()->getCache()->getNumericStorageId();
+		$this->versionMapper->deleteAllVersionsForUser($userHomeStorageId, $path);
+
 		$fullPath = '/' . $user . '/files_versions' . ($path ? '/' . $path : '');
 		if ($this->rootFolder->nodeExists($fullPath)) {
 			$this->rootFolder->get($fullPath)->delete();
diff --git a/apps/files_versions/lib/Db/VersionsMapper.php b/apps/files_versions/lib/Db/VersionsMapper.php
index 86a0be826681b..a8b8bc5f2b5c0 100644
--- a/apps/files_versions/lib/Db/VersionsMapper.php
+++ b/apps/files_versions/lib/Db/VersionsMapper.php
@@ -28,6 +28,7 @@
 
 use OCA\Files_Versions\Db\VersionEntity;
 use OCP\IDBConnection;
+use OCP\DB\QueryBuilder\IQueryBuilder;
 use OCP\AppFramework\Db\QBMapper;
 use OCP\DB\IResult;
 
@@ -85,4 +86,38 @@ public function deleteAllVersionsForFileId(int $fileId): int {
 			 ->where($qb->expr()->eq('file_id', $qb->createNamedParameter($fileId)))
 			 ->executeStatement();
 	}
+
+	public function deleteAllVersionsForUser(int $storageId, string $path = null): void {
+		$fileIdsGenerator = $this->getFileIdsGenerator($storageId, $path);
+
+		$versionEntitiesDeleteQuery = $this->db->getQueryBuilder();
+		$versionEntitiesDeleteQuery->delete($this->getTableName())
+			->where($versionEntitiesDeleteQuery->expr()->in('file_id', $versionEntitiesDeleteQuery->createParameter('file_ids')));
+
+		foreach ($fileIdsGenerator as $fileIds) {
+			$versionEntitiesDeleteQuery->setParameter('file_ids', $fileIds, IQueryBuilder::PARAM_INT_ARRAY);
+			$versionEntitiesDeleteQuery->executeStatement();
+		}
+	}
+
+	private function getFileIdsGenerator(int $storageId, ?string $path): \Generator {
+		$offset = 0;
+		do {
+			$filesIdsSelect = $this->db->getQueryBuilder();
+			$filesIdsSelect->select('fileid')
+				->from('filecache')
+				->where($filesIdsSelect->expr()->eq('storage', $filesIdsSelect->createNamedParameter($storageId, IQueryBuilder::PARAM_STR)))
+				->andWhere($filesIdsSelect->expr()->like('path', $filesIdsSelect->createNamedParameter('files' . ($path ? '/' . $this->db->escapeLikeParameter($path) : '') . '/%', IQueryBuilder::PARAM_STR)))
+				->andWhere($filesIdsSelect->expr()->gt('fileid', $filesIdsSelect->createParameter('offset')))
+				->setMaxResults(1000)
+				->orderBy('fileid', 'ASC');
+
+			$filesIdsSelect->setParameter('offset', $offset, IQueryBuilder::PARAM_INT);
+			$result = $filesIdsSelect->executeQuery();
+			$fileIds = $result->fetchAll(\PDO::FETCH_COLUMN);
+			$offset = end($fileIds);
+
+			yield $fileIds;
+		} while (!empty($fileIds));
+	}
 }
diff --git a/apps/files_versions/tests/Command/CleanupTest.php b/apps/files_versions/tests/Command/CleanupTest.php
index b5463aa61db14..085b25822f3dc 100644
--- a/apps/files_versions/tests/Command/CleanupTest.php
+++ b/apps/files_versions/tests/Command/CleanupTest.php
@@ -27,7 +27,10 @@
 
 use OC\User\Manager;
 use OCA\Files_Versions\Command\CleanUp;
+use OCP\Files\Cache\ICache;
+use OCP\Files\Folder;
 use OCP\Files\IRootFolder;
+use OCP\Files\Storage\IStorage;
 use Test\TestCase;
 
 /**
@@ -48,6 +51,9 @@ class CleanupTest extends TestCase {
 	/** @var \PHPUnit\Framework\MockObject\MockObject | IRootFolder */
 	protected $rootFolder;
 
+	/** @var \PHPUnit\Framework\MockObject\MockObject | VersionsMapper */
+	protected $versionMapper;
+
 	protected function setUp(): void {
 		parent::setUp();
 
@@ -55,9 +61,10 @@ protected function setUp(): void {
 			->disableOriginalConstructor()->getMock();
 		$this->userManager = $this->getMockBuilder('OC\User\Manager')
 			->disableOriginalConstructor()->getMock();
+		$this->versionMapper = $this->getMockBuilder('OCA\Files_Versions\Db\VersionsMapper')
+			->disableOriginalConstructor()->getMock();
 
-
-		$this->cleanup = new CleanUp($this->rootFolder, $this->userManager);
+		$this->cleanup = new CleanUp($this->rootFolder, $this->userManager, $this->versionMapper);
 	}
 
 	/**
@@ -70,6 +77,21 @@ public function testDeleteVersions($nodeExists) {
 			->with('/testUser/files_versions')
 			->willReturn($nodeExists);
 
+		$userFolder = $this->createMock(Folder::class);
+		$userHomeStorage = $this->createMock(IStorage::class);
+		$userHomeStorageCache = $this->createMock(ICache::class);
+		$this->rootFolder->expects($this->once())
+			->method('getUserFolder')
+			->willReturn($userFolder);
+		$userFolder->expects($this->once())
+			->method('getStorage')
+			->willReturn($userHomeStorage);
+		$userHomeStorage->expects($this->once())
+			->method('getCache')
+			->willReturn($userHomeStorageCache);
+		$userHomeStorageCache->expects($this->once())
+			->method('getNumericStorageId')
+			->willReturn(1);
 
 		if ($nodeExists) {
 			$this->rootFolder->expects($this->once())
@@ -104,7 +126,7 @@ public function testExecuteDeleteListOfUsers() {
 
 		$instance = $this->getMockBuilder('OCA\Files_Versions\Command\CleanUp')
 			->setMethods(['deleteVersions'])
-			->setConstructorArgs([$this->rootFolder, $this->userManager])
+			->setConstructorArgs([$this->rootFolder, $this->userManager, $this->versionMapper])
 			->getMock();
 		$instance->expects($this->exactly(count($userIds)))
 			->method('deleteVersions')
@@ -136,7 +158,7 @@ public function testExecuteAllUsers() {
 
 		$instance = $this->getMockBuilder('OCA\Files_Versions\Command\CleanUp')
 			->setMethods(['deleteVersions'])
-			->setConstructorArgs([$this->rootFolder, $this->userManager])
+			->setConstructorArgs([$this->rootFolder, $this->userManager, $this->versionMapper])
 			->getMock();
 
 		$backend = $this->getMockBuilder(\OCP\UserInterface::class)