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Epitope and non-epitope coloring for H1N1pdm NA broken #33

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trvrb opened this issue Jul 2, 2019 · 1 comment
Open

Epitope and non-epitope coloring for H1N1pdm NA broken #33

trvrb opened this issue Jul 2, 2019 · 1 comment
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@trvrb
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trvrb commented Jul 2, 2019

Currently, epitope (ep) and non-epitope (ne) coloring for H1N1pdm NA is broken:

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trvrb commented Jul 11, 2019

This derives from the fact that we only specify auspice_config_h1n1pdm.json for both HA and NA and we don't have an epitope mask for NA epitope sites. To fix this we need smarter layering of configs ala #5 or to expand out additional configs for lineage x segment combinations.

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