diff --git a/.cache.tar.xz b/.cache.tar.xz
index d026b533f1..0e7b5864d0 100644
Binary files a/.cache.tar.xz and b/.cache.tar.xz differ
diff --git a/public/components.json b/public/components.json
index 8b585646ad..8b8025e3ec 100644
--- a/public/components.json
+++ b/public/components.json
@@ -8537,6 +8537,10 @@
           "name": "rnafusion",
           "version": "3.0.2"
         },
+        {
+          "name": "rnafusion",
+          "version": "3.0.2"
+        },
         {
           "name": "rnafusion",
           "version": "3.0.2"
@@ -27593,6 +27597,10 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "genomeassembler",
           "version": "dev"
@@ -107861,6 +107869,22 @@
           "name": "pathogensurveillance",
           "version": "dev"
         },
+        {
+          "name": "phyloplace",
+          "version": "1.0.0"
+        },
+        {
+          "name": "ampliseq",
+          "version": "2.12.0"
+        },
+        {
+          "name": "multiplesequencealign",
+          "version": "1.0.0"
+        },
+        {
+          "name": "pathogensurveillance",
+          "version": "dev"
+        },
         {
           "name": "phyloplace",
           "version": "1.0.0"
@@ -114147,6 +114171,10 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "genomeassembler",
           "version": "dev"
@@ -133123,6 +133151,10 @@
           "name": "viralrecon",
           "version": "2.6.0"
         },
+        {
+          "name": "viralrecon",
+          "version": "2.6.0"
+        },
         {
           "name": "viralrecon",
           "version": "2.6.0"
@@ -207702,6 +207734,10 @@
           "name": "phageannotator",
           "version": "dev"
         },
+        {
+          "name": "phageannotator",
+          "version": "dev"
+        },
         {
           "name": "phageannotator",
           "version": "dev"
@@ -211368,6 +211404,10 @@
           "name": "riboseq",
           "version": "1.0.1"
         },
+        {
+          "name": "riboseq",
+          "version": "1.0.1"
+        },
         {
           "name": "riboseq",
           "version": "1.0.1"
diff --git a/public/pipelines.json b/public/pipelines.json
index 91349918fb..eb541cdd4f 100644
--- a/public/pipelines.json
+++ b/public/pipelines.json
@@ -6616,12 +6616,12 @@
             "fork": false,
             "url": "https://api.github.com/repos/nf-core/cutandrun",
             "created_at": "2021-01-14T11:47:23Z",
-            "updated_at": "2024-12-23T06:48:17Z",
+            "updated_at": "2024-12-30T01:38:07Z",
             "pushed_at": "2024-12-20T13:07:20Z",
             "homepage": "https://nf-co.re/cutandrun",
             "size": 9046,
-            "stargazers_count": 85,
-            "watchers_count": 85,
+            "stargazers_count": 86,
+            "watchers_count": 86,
             "language": "Nextflow",
             "has_issues": true,
             "has_projects": true,
@@ -6645,7 +6645,7 @@
             "visibility": "public",
             "forks": 49,
             "open_issues": 30,
-            "watchers": 85,
+            "watchers": 86,
             "default_branch": "master",
             "temp_clone_token": "",
             "allow_squash_merge": false,
@@ -18844,12 +18844,12 @@
             "fork": false,
             "url": "https://api.github.com/repos/nf-core/mag",
             "created_at": "2018-05-22T06:06:58Z",
-            "updated_at": "2024-12-22T14:54:35Z",
+            "updated_at": "2024-12-29T17:14:19Z",
             "pushed_at": "2024-12-20T15:59:05Z",
             "homepage": "https://nf-co.re/mag",
             "size": 26340,
-            "stargazers_count": 219,
-            "watchers_count": 219,
+            "stargazers_count": 220,
+            "watchers_count": 220,
             "language": "Nextflow",
             "has_issues": true,
             "has_projects": true,
@@ -18877,7 +18877,7 @@
             "visibility": "public",
             "forks": 113,
             "open_issues": 74,
-            "watchers": 219,
+            "watchers": 220,
             "default_branch": "master",
             "temp_clone_token": "",
             "allow_squash_merge": false,