22.0.0

[effigies]

Release Notes

New feature release in the 22.0.x series.

This release has been tested to work with Python 3.9 and FreeSurfer 7.2,
which are now bundled in the Docker image.

This release also features improvements to T2* and carpetplot reporting.

For the next release, we are investigating issues with susceptibility
distortion correction (SDC). Please check your results carefully and report
any issues you find.

Changes

• FIX: Update wrapper python path (FIX: Update wrapper python path #2783)
• FIX: Preserve collect_data behavior by using named args (FIX: Preserve collect_data behavior by using named args #2754)
• FIX: Update fMRIPrep version in bibliography at run time (FIX: Update *fMRIPrep* version in bibliography at run time #2738)
• FIX: Plot carpetplot with CIFTI-specific colorbar (FIX: Plot carpetplot with CIFTI-specific colorbar #2737)
• FIX: Two minor typos in report spec (fix two minor typos in report spec #2708)
• ENH: Clip T2* values at 100ms to keep consistent histogram axes (ENH: Clip T2* values at 100ms to keep consistent histogram axes #2781)
• ENH: Plot histogram of T2* values in gray-matter mask (ENH: Plot histogram of T2* values in gray-matter mask #2778)
• ENH: Save T2starmap files in all requested output spaces, if calculated (ENH: Save T2starmap files in all requested output spaces, if calculated #2776)
• ENH: Compare T2* map to BOLD reference (ENH: Compare T2* map to BOLD reference #2751)
• ENH: Add edge-regressors to confounds & crown to carpetplot (ENH: Add edge-regressors to confounds & crown to carpetplot #2621)
• ENH: Add major/minor versions to base workflow name (ENH: Add major/minor versions to base workflow name #2716)
• DOC: Fix JSON typo in config in FAQ ([DOC] fix JSON typo in config in FAQ #2771)
• DOC: Clarify calculation of confounding signals (DOC: clarify calculation of confounding signals #2724)
• MNT: Build on Python 3.9 environment (MNT: Build on Python 3.9 environment #2782)
• MNT: Seed ignore-revs file and script to tag new hashes with log entries (MNT: Seed ignore-revs file and script to tag new hashes with log entries #2748)
• MNT: Require PyBIDS 0.15+ to allow fMRIPrep to preserve zero-padding in run entity (MNT: Require PyBIDS 0.15+ to allow fMRIPrep to preserve zero-padding in run entity #2745)
• MNT: Upload artifacts after each step of Circle's workflow (MAINT: Upload artifacts after each step of Circle's workflow #2736)
• MNT: Normalize code style of workflows.confounds (MAINT: Normalize code style of workflows.confounds #2729)
• MNT: Ask for fmriprep-docker RUNNING line (MNT: Ask for fmriprep-docker RUNNING line #2670)
• DOCKER: Bundle FreeSurfer 7 (DOCKER: Bundle FreeSurfer 7 #2779)
• CI: Touch up CircleCI configuration (CI: Touch up CircleCI configuration #2764)
• CI: Update package builds to use python -m build (CI: Update package builds to use python -m build #2746)

New Contributors

• @keithcallenberg made their first contribution in fix two minor typos in report spec #2708
• @dillonplunkett made their first contribution in DOC: clarify calculation of confounding signals #2724
• @Remi-Gau made their first contribution in [DOC] fix JSON typo in config in FAQ #2771

Full Changelog: 21.0.2...22.0.0

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This discussion was created from the release 22.0.0.