diff --git a/CHANGES.md b/CHANGES.md index 77fd2521..4c83efe9 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,3 +1,37 @@ +23.1.0 (TBD) +============ +The next minor release of *NiBabies*, this release includes a number of new goodies, including: + +### New surface reconstruction option +M-CRIB-S (Adamson et al., https://www.nature.com/articles/s41598-020-61326-2), has shown to improve performance in participants under 9 months. If you would like to try this method, add the following to your command: `--surface-recon-method mcribs`. + +Note: Currently, a pre-computed segmentation derivative must be provided to run mcribs. + +### Improved batch processing +*NiBabies* now automatically parses the BIDS directory for participant ages, first searching in the +participant's `session.tsv`, and falling back to `participants.tsv`. This simplifies batch submissions including multiple subjects & sessions. As a result, the `--age-months` flag has been deprecated, and will be removed in a later release. + +### Goodvoxels projection +An option to determine and exclude high-variance voxels from being projected to the surface when creating CIFTI files. To enable this, add `--project-goodvoxels` to your command. + + +## Full Changelog + * CI: Purge codecov python package (#282) + * DKR: Upgrade Docker base, c3d (#275) + * DKR: Add M-CRIB-S to Docker container (#283) + * DKR: Update dependencies, split into multi-stage build + * ENH: Add option to exclude projecting high variance voxels to surface (#278) + * ENH: Resample morphometrics to fsLR CIFTI-2 files when outputing CIFTIs (#279) + * ENH: Add MCRIBReconAll as alternative surface reconstruction method (#283) + * ENH: Reorder anatomical processsing, run ANTs DenoiseImage on anatomicals (#286) + * ENH: Extract participant ages from BIDS sources, deprecate `--age-months` (#287) + * ENH: Dilate BOLD mask by 2 voxels to prevent over-aggressive masking degrading T2star map estimation (#296) + * FIX: Improve free memory estimation (#284) + * FIX: Ensure age is extracted from sessions file (#291) + * FIX: Restore CIFTI medial wall masking, subcortical volume LAS reorientation (#298) + * FIX: Recify "goodvoxels" surface projection (#301) + * MAINT: Drop TemplateFlowSelect patches (#290) + 23.0.0 (January 23, 2023) ========================= New year, new *NiBabies* minor series!