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ChangeLog
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commit 24c45b0102e4daf9417e3589b9e3411dd50f4704
Merge: 8074db9 bd15937
Author: Sarod Yatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Tue Aug 28 16:44:34 2018 +0200
Merge pull request #58 from nlesc-dirac/ci_test
Continuous Integration
commit bd15937385f286937dc8d6bf9f316d8a33f0a73b
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 16:36:26 2018 +0200
disable SL test
commit ed40c6f6c9163aeb55c60eaf1912c13bd144faab
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 16:27:32 2018 +0200
add casacore paths for cmake build on SL
commit 8074db95cd25be2bdbdd10ecf0eb1023b8741ae3
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Tue Aug 28 16:12:19 2018 +0200
add DOI
closes #14
commit 4b2c475f9f2db94910143cb1456a81307d918426
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:45:47 2018 +0200
fix casacore build path
commit 69ec55d8e2f121732774f1bf9dfaa20eb6f41d6c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:37:47 2018 +0200
cmake is called cmake3 on SL
commit 8b8cd50f7a79bad3e89ce51ba59d5cb493d93f30
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:27:15 2018 +0200
change cmake version and update instructions
commit 2c87ae539302d0cd88695aa3e0d68a4362082b18
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:15:13 2018 +0200
disable measurement data and fix path
commit 67f1bc8385597762560b557d5acbf0d88bcca88d
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:07:45 2018 +0200
dsable arch linux
commit 267141d3848bf9e9ce707b57e178a3041e99253c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 15:06:40 2018 +0200
add wget to download measurement set
commit 52adaee7f0710bd2318f4e0196587fd4eaf3180e
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 14:54:33 2018 +0200
add sl compile instructions
commit 20cbbd8f40d17a72176a67d6c7b409003a6d6160
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Aug 28 14:33:53 2018 +0200
fix docker command
commit 21b37a3aafefcf3f3e1dd5a59eebe786d08fc8f6
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 11:49:25 2018 +0200
chmod +x
commit af8937d2ecdcf19b05e1ce1f4fe376060894d926
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 11:48:14 2018 +0200
added script to change freq of MS
commit f5a6a766e6ad914c1cfb2303988681efbc2f425b
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 11:38:40 2018 +0200
rho values to match cluster file
commit 74eb0df36830b967e4c7cedddb2997504e246523
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 11:37:24 2018 +0200
example scripts for MPI version
commit fa66c95c07db775bd173d06ed275ab916f741f12
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 11:21:51 2018 +0200
fix default values of interpolation
commit e7a4845f9226c7d94a021dea1ebe0bbd85f5c23b
Merge: ed56640 97a6e83
Author: Sarod Yatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Tue Aug 28 10:38:05 2018 +0200
Merge branch 'master' into dev
commit ed56640cc848683ad3fc83a1ae9fb0cae07d7b40
Merge: 7688f98 5d96d86
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Tue Aug 28 10:28:55 2018 +0200
Merge branch 'dev' of github.com:nlesc-dirac/sagecal into dev
commit 7688f9804fe8c393fc99c120b454e130d5531aed
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Tue Aug 28 10:28:04 2018 +0200
Now almost the same CXX flags as Makefile and Makefile.gpu: CXXFLAGS=-O3 -Wall -g -std=c++11
commit 5d96d86c7c88409af256e48539fdb8164a0249e5
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 10:14:10 2018 +0200
more install updates
commit e2142b5e902ecf61a495c85330cbb7b095ab7ddc
Merge: 3a218f1 cff31fc
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 10:06:36 2018 +0200
Merge branch 'dev' of github.com:nlesc-dirac/sagecal into dev
commit 3a218f11c48fbf064a9f2bb847aa1ccabf336789
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 10:04:19 2018 +0200
more install updates
commit cff31fc5778604ac18e1d49cb748e1e9e021a6df
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Tue Aug 28 09:59:41 2018 +0200
Need to comment this out, or it will keep searching for hdf5, without success
commit 77d0cb4c8da9c6cda2a71132be2c1dcc3774a749
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 09:48:34 2018 +0200
more install instructions
commit 1a15fbe07e542ed2239a67403951ba3c008112d5
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Aug 28 09:43:14 2018 +0200
updating install instructions
commit 2130398fea6977bccefb859f8f6adb5f7ee73b58
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 23:46:10 2018 +0200
install files according to #55
commit 97a6e8387f6a5628f0707689055d6393b5f6a16d
Merge: b85b031 475b8b0
Author: Sarod Yatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Mon Aug 27 23:20:56 2018 +0200
Merge pull request #55 from gijzelaerr/install
add missing install and SO version
commit 475b8b0f79ec23cd70e2f4f2d7089bc9fa313a7d
Author: Gijs Molenaar <gijs@pythonic.nl>
Date: Mon Aug 27 19:32:13 2018 +0200
add missing isntall and SO version
commit deab251c0097e38cdec035bad97635fe54c5f5d3
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 17:46:06 2018 +0200
update version to checkout
commit 522beb037a7ed55b74690bd9c1db16b82fb5f7ed
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 15:41:57 2018 +0200
correct name of input variables
commit f812fa8b7c70341396b54782ecdbeb41818d594d
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 15:32:19 2018 +0200
reorder CXX flags
commit 788bbdbeca12daf5eba273916c2a8cfc6fc21fb8
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 15:24:44 2018 +0200
casacore has 2 include dirs
commit 29b3e1f0547bdb3bf8b84e05d0ee9e5673656864
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 14:56:47 2018 +0200
minimum use of CXX options
commit 33ae6527c9055f630b69d2027f6a3a9e49adb51b
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 13:26:09 2018 +0200
add cmake support for buildsky/restore
commit 03cf4b874fb340375c7d1b53a9562d4eaf96a142
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Aug 27 11:30:41 2018 +0200
added cmake support for MPI
commit ac2c2f952db6c6e15bb35cce10e7c8ea4827db9c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Fri Aug 24 15:19:03 2018 +0200
fix scientific linux version
commit 369623d587388776f6a02fa120ed8370b367c9eb
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Fri Aug 24 13:32:29 2018 +0200
add scientific linux
commit b85b031b9b522877020dc3759509bde65b17d29f
Merge: 8b09a58 0b072da
Author: Hanno Spreeuw <HannoSpreeuw@users.noreply.github.com>
Date: Wed Aug 1 12:32:10 2018 +0200
Merge pull request #53 from nlesc-dirac/dev
fix issue #52, update LBFGS interface
commit 0b072da621f8217270c29e5a63048a3a95ac336c
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jul 31 11:49:23 2018 +0200
fixing issue #52
commit 39d3ed8ad3bbb18080d3c40b894415f171c76e3f
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Jul 30 16:33:46 2018 +0200
fix typo
commit d11e1653fde199b8b831a397feaa1ef4aa2950a2
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Jul 30 16:16:03 2018 +0200
make sure rho text file exactly matches no. clusters
commit 84b813da3f0966d96d8cff3aec89f95037f5e575
Merge: fa1448b 8b09a58
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Jul 30 15:30:05 2018 +0200
Merge branch 'dev' of github.com:nlesc-dirac/sagecal into dev
commit fa1448be0197763c4f626f677f435c1e5c2cfd35
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon Jul 30 15:25:08 2018 +0200
cleaning up LBFGS related code, removed duplicates
commit 8b09a58e0b1f3d395eaf98e28a8d822e96e26024
Merge: b72644b c366e18
Author: Sarod Yatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Sat Jun 23 20:20:29 2018 +0200
Merge pull request #50 from nlesc-dirac/dev
Dev
commit c366e18977275271546baae6860a68df22093986
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 19 15:01:10 2018 +0200
bug fix
commit b66c291b8efa186d5804ebcfca3a6d11097a499a
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 19 14:59:00 2018 +0200
missing HAVE_CUDA added
commit 157eaf84cd4f808cad80c331e836d17b69aa1a7b
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 19 14:42:03 2018 +0200
added function to predict using stored solutions, with GPU accel
commit 41cf1b3b69981368579b2ccdb5d102184fffdf2b
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 19 13:19:09 2018 +0200
bug fix in reading solutions file
commit b72644b9728c617eb9b2ec568e9ee2bcfdbc864b
Merge: b38add6 a415926
Author: Hanno Spreeuw <HannoSpreeuw@users.noreply.github.com>
Date: Wed Jun 13 10:10:13 2018 +0200
Merge pull request #49 from nlesc-dirac/dev
streamlining LBFGS routines
commit a415926866ae1a0f563a95e192d88115b9d19926
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 12 12:47:06 2018 +0200
removal of redundant memory copies, stopping when grad norm too low
commit 67f71e0ac5345d72faf99d8e736ced049b66fcd5
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 12 11:31:11 2018 +0200
stop when gradient norm is too small
commit e965dd01191a818d38f5bca88328306f7553ddb1
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 12 11:10:43 2018 +0200
removal of redundant memory copies
commit bd69e0044b4106a9dbc1ecb9f604da969ec4150b
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Jun 12 10:44:10 2018 +0200
removed some redundant memory copies
commit b38add6d20e5439473b587c73c62c5a35c7c0827
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Mon May 7 20:35:42 2018 +0200
to enable adding antenna table by hand (not using keywords)
commit be4065a3a215d13dd45074ca1d7ca240358f762e
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Wed May 2 21:13:07 2018 +0200
-pg not appropriate for general purpose
commit d0a2e251a81c051c4bf93b961af90547d23d24cd
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Wed May 2 21:10:01 2018 +0200
-pg not appropriate, NVML_INC is redundant and link to the latest cuda, i.e. cuda 9.1
commit 45730106a1826eca34dc613552e41348f2834ec8
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Mon Apr 30 14:58:30 2018 +0200
CUDAINC and NVML_INC are redundant
commit 388aa34148e2195f071feb3023673ce7954e569f
Merge: bbc3863 6a28a02
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Mon Apr 30 14:51:39 2018 +0200
Merge branch 'master' of github.com:nlesc-dirac/sagecal
commit bbc3863a29d754e8790b700278acdfebbce337d3
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Mon Apr 30 14:51:18 2018 +0200
'-std=c++11' is necessary to build Sagecal for casacore/2.4.1-gcc-6.3.0
commit 6a28a0211280b4bac88a7513516c926dcc24eac0
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Sun Apr 29 17:15:19 2018 +0200
check for step size being too small
commit 54bd95e977dd9b9679fad86812741c8adc9341da
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:24:51 2018 +0200
casacore/v2.4.1-gcc-6.3.0 gives errors like 'error: range-based ‘for’ loops are not allowed in C++98 mode' and 'error: ISO C++ forbids declaration of ‘c’ with no type [-fpermissive]'
commit b9610447416721a7ed1c1e6e184a4c005c387f02
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:21:19 2018 +0200
Typo: casacore/casacore should be casacore
commit e3a47a28c3b0b07e5f4809f9a0274c3adc71ca08
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:12:11 2018 +0200
Remove redundant whitespace
commit fc6d275de5119b2c5744da860dbbc2984549a045
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:09:13 2018 +0200
'/usr/include/nvidia/gdk/' does not exist, at least not on fs5 and NVML_INC is redundant
commit 5feb1d2dfda28361f70aa7c319b56ed59f18bc65
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:05:34 2018 +0200
'/usr/local/cuda/include' does not exist, at least not on fs5 and CUDAINC is redundant
commit 02548a6b9f5ee16784b2d56dab85fc87fe17211c
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 17:00:07 2018 +0200
NVML_INC is redundant and /usr/include/nvidia/gdk/ does not exist, at least not on fs5.
commit 28daeab055d505e4dce80ab8139138ccb45edd2a
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:52:24 2018 +0200
CUDAINC is redundant and '/usr/local/cuda/include' does not exist, at least not on fs5. 'module load cuda91' or some similar adjustment to PATH should suffice.
commit 020a44ff8746e9680f9cd833f4ff697ba920f92d
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:36:43 2018 +0200
'-L/usr/lib64/nvidia/' in 'NVML_LIB=-lnvidia-ml -L/usr/lib64/nvidia/' since that directory does not exist, at least not on fs5
commit 58204faadb14c0c5cb7c11af741dbc9bb75c6cef
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:32:32 2018 +0200
remove redundant whitespace
commit e4f01df6c7ae3336aaa6a5480b8a55ae8c560498
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:21:57 2018 +0200
CUDAINC is redundant when cuda in PATH, e.g. after 'module load cuda91'
commit 9a1cf91902ab5e08b962f34a03b0f121c5f573de
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:09:03 2018 +0200
Adjusted Makefile for latest casacore on fs5: casacore/v2.4.1-gcc-6.3.0
commit e3c5a9aff520cb26509f4a0b7547bf1aceee5e4b
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 16:06:07 2018 +0200
Adjusted Makefile.gpu for latest casacore on fs5: casacore/v2.4.1-gcc-6.3.0
commit 69a9034d9d52a0886e1dbeddc50c11d06eed524b
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Apr 26 15:58:54 2018 +0200
This fixes 'cannot find -lnvidia-ml' together with the '-lcuda -lcudart' from the previous commit
commit c8a1413a4f177c19504d882daadb728931302b45
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Apr 24 09:34:08 2018 +0200
added -lcuda -lcudart
commit c3b1daaff26896db15fe310a50f2094bbd9ebbb0
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Mon Apr 23 16:55:01 2018 +0200
make clean tries to delete non-existing files.
commit a9d05232f351d056be3e404dc1ee25a03d1e43ec
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Wed Apr 18 10:10:33 2018 +0200
libsagecal.a should be libradio.a
commit 19e0b8a7aa981cf95f7b40a08d4684dda1737f0f
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Apr 4 18:17:19 2018 +0200
create separate build folders for each test
commit b771e7ef171fc91d577fbef3a7962efb176338a1
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Apr 4 18:02:49 2018 +0200
add archlinux build test
commit 71d281d517507cbe91df3b4efa0dc6bc096d50be
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Apr 4 17:49:54 2018 +0200
cleanup travis configuration
commit 1991c7924b7ee2c2ad7fd99de51c6fa517dacb29
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Apr 4 17:46:35 2018 +0200
organize build scripts
commit f1c67fa93528a4ea9d4fd0a7b99848e271c738c6
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Apr 4 16:28:42 2018 +0200
info about using more than 1 GPU
commit db185474699aca0bc752787f301925f0205ee08c
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Apr 4 13:52:39 2018 +0200
update documentation
commit 25b10100baec0dfcd1215feda9b793cb6cfd14fc
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Apr 3 13:29:34 2018 +0200
fix isse #48
commit c22c981dc577fa87e5bc39df5fd71f783e1b8d18
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Mar 28 14:14:57 2018 +0200
orcid should be just the id
commit 78bcfe114e1ae3901e8f8a7d8852ce09d13284d4
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Mar 28 14:07:35 2018 +0200
added citation, some fixes to makefile
commit eee948f2c6dd62b279a5c58452e6b5b98fec3534
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Thu Mar 22 16:54:26 2018 +0100
Now authors of articles that were based on Sagecal should know how to refer to it
commit 1c1d60606fb81e8af70de5222a046db549e5234c
Merge: 3f25c79 0dbab64
Author: SarodYatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Tue Mar 13 12:10:51 2018 +0100
Merge pull request #47 from tammojan/casacore2
Update namespace and include path for casacore >= 2.0
commit 0dbab64b3d170c6af97a3592967e2e1cfacf3ba6
Author: Tammo Jan Dijkema <T.J.Dijkema@gmail.com>
Date: Tue Mar 13 10:08:15 2018 +0100
Update namespace and include path for casacore >= 2.0
commit 3f25c7987bba3f3a097165a426c8b3b5f0a6ebfa
Merge: ec010be 4f0bf0d
Author: SarodYatawatta <30378342+SarodYatawatta@users.noreply.github.com>
Date: Mon Mar 12 22:07:34 2018 +0100
Merge pull request #45 from tammojan/openblas_root
Make OpenBLAS_ROOT_DIR configurable
commit 4f0bf0de1a22aacb4d0f30d3a5498f04b73ccb6c
Author: Tammo Jan Dijkema <T.J.Dijkema@gmail.com>
Date: Mon Mar 12 09:28:45 2018 +0100
Make OpenBLAS_ROOT_DIR configurable
commit ec010be541feb0eadf51f06a3972872eda57c671
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Thu Mar 1 20:19:31 2018 +0100
add dev branch build status
commit 3b531e3b581eed76ac844c9e9405af1d3dba25cb
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Thu Mar 1 18:21:34 2018 +0100
add travis badge
commit 7af750c1f59eb5f1d6859be2e2f2f53ccf4742c8
Merge: 7b78914 cb352fa
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Thu Mar 1 18:12:08 2018 +0100
Merge pull request #44 from nlesc-dirac/ci_test
Add Travis-CI
commit 8ff8379a4661fb4e5c104df892f8dc0b0d4c340f
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 18:07:59 2018 +0100
fix invisible character in test script
commit cb352fad9aa0f73d80d93921316e43d92a5d3f86
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 17:59:49 2018 +0100
clean up environment variables
commit eee31e82c060aaff378751f28cbeb401dcd7e178
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 17:53:41 2018 +0100
add container name
commit bf1596025c13be38707013e8bcff423d23d8e9e8
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 17:50:01 2018 +0100
add script to test ubuntu builds
commit f396810f31c971da4d70ea9aefce36768f498412
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 17:11:50 2018 +0100
fix permission problems while clonning
commit 12f99dc62d395c4825a2e2e2312dfe61b9d0eb00
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 17:03:53 2018 +0100
fix environment argument
commit 52afdf1cbd46ce8974d7880acf6414214882a496
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:58:01 2018 +0100
set environment variable with docker exec
commit 91efc062aea6cee4347b70c3119740548af2288b
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:50:38 2018 +0100
add smart branch detection and setup environment variable
commit 5724879d56c2d17fc9794a02c539bd32572b636a
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:43:31 2018 +0100
change the build branch and update cache before installing the packages
commit 8024b9217fd4c75d1956128260179fc49cda47c2
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:38:28 2018 +0100
update the package repos before installing the kern packages
commit f010fdaa6b618eba91f5cc74f5dac2871028b8da
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:32:40 2018 +0100
add kern repository
commit 9eb949070422303b1c110cca17d2d25892db0fe2
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:28:12 2018 +0100
fix the yaml file
commit c538b281dab6296b3e8b9ac7a997bd8039e6bf18
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 16:19:45 2018 +0100
add travis configuration to use docker
commit 7b789147fe58d0c27679b24d1dc29e47e48661fc
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Thu Mar 1 15:06:55 2018 +0100
disable hdf5 module because it breaks the build
commit b4f101e0d6a6a9cd71075202924f3340704bce83
Merge: 22f89ae 1088583
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Wed Feb 28 15:49:20 2018 +0100
Merge pull request #41 from nlesc-dirac/sprint
Sprint changes
commit 22f89ae6d5446bb616623f30bf0244ecb811d3b7
Merge: 1f139b2 f4ea65f
Author: Faruk D <fdiblen@users.noreply.github.com>
Date: Wed Feb 28 15:46:59 2018 +0100
Merge pull request #40 from nlesc-dirac/sprint_cmake
Cmake Support
commit f4ea65ff815959d91b166414fbfdaae7fb4a5e3b
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 15:43:32 2018 +0100
added -g option to build flags
commit 6c9e7f4c20c903bc3f24e9891d5e7e79ce3c6978
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 14:51:29 2018 +0100
update build flags
commit 1088583a21e6f91377fdfc6a4a5b382a70803d73
Merge: 005e68d 4bf20e7
Author: Hanno Spreeuw <HannoSpreeuw@users.noreply.github.com>
Date: Wed Feb 28 14:38:46 2018 +0100
Merge pull request #27 from nlesc-dirac/sprint_clang
Sprint clang
commit 8df6355697ee34babf5d18ecd63c92d87db76967
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 14:16:36 2018 +0100
add hdf5 checks and libraries
commit 06aa95abe0d2a677fdd690548a6b095383a7c666
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 12:05:39 2018 +0100
update the instructions as suggested by @SarodYatawatta
commit 68475f9b910c488179888e06215d13c099f1fa64
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 11:39:30 2018 +0100
add instructions for other distros and temporarily comment out old installation instructions
commit 2a4a93f953bf0047ed5564367e0089942a1b24f2
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 11:20:06 2018 +0100
update the package list for Ubuntu
commit 505334573635f4c5986c11ee9f9c86dd7b5b03ba
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:57:50 2018 +0100
add OpenBLAS status message and disable gfortran status
commit 4bf20e77d14a61291f4dfa10c862b4986f5693ec
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Feb 28 10:52:57 2018 +0100
added cookbook link
commit cf6d21978f83befabfb545299c3e9fee1e6e4632
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:50:50 2018 +0100
fix Openblas library path
commit e5cb15316ba8937f209e9fd46fd57ed6296f2b78
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:38:29 2018 +0100
upadate the instructions to give an example about optional casacore path
commit 8153a944e36bf5054d0b46f19767e0d9275c727f
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:32:46 2018 +0100
add make command to instructions
commit 6209d8fb6d4eb0c62ed46a6ffaeb609127809d15
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:30:29 2018 +0100
add custom path for OpenBLAS
commit 909c2024acf88a39378f0dfcc550c408ee999419
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:27:08 2018 +0100
added ubuntu version
commit 218625303507b08c2294240a0c2c80607f379ca9
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:14:58 2018 +0100
add instructions for KERN repo
commit ffd0adeb0489e2b34b5373fc7cfd743413082636
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:12:02 2018 +0100
upadate ubuntu instructions
commit 578470f07d9f5b8af40674d47669c932ce6ff512
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Wed Feb 28 10:02:27 2018 +0100
fixed wrong size of memory allocation
commit 20298cbfcc891db9eefd0ed3285b1f557d1a3f7d
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Wed Feb 28 10:00:24 2018 +0100
upadete the instructions for ubuntu
commit c6636f15101cb6b63e276f40bc9b1316b47b4860
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 18:09:50 2018 +0100
fix issues for Ubuntu and add preliminary instructions to install
commit 900f8bf9a16bcb0dfb096b3c96a79088881f850e
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 17:04:58 2018 +0100
add cmake_binary_dir variable to fix folder issues during configuration
commit d73bb464adc10967ff92b6716ec28136bc16b03c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 16:43:09 2018 +0100
solves dist folder issues for the build
commit 64fc5e833435b5ef2eb0b37598e970607929da6a
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 16:34:47 2018 +0100
add rtr_solve_robust to dirac library
commit 068cf2322cd1ddc06026cb90a4cbbdcb8532776c
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 16:15:23 2018 +0100
check int range
commit dd094c317d7a045bbab16e09da03e4cc00731320
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 16:09:22 2018 +0100
fix invalid cases
commit 7fb1a1b10adad10ce55807620ec7e2b21a12492e
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 15:58:41 2018 +0100
define cxx flags before the status message
commit e657c4769a5ce3a90169e53f74f32d102f02e37c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 15:56:54 2018 +0100
fixes casacore include path on das5
commit c660eb70e7548cb814a2fe4e3f438995eae7e893
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 15:51:48 2018 +0100
add casacore root dir status message
commit a2bfb8468033600d25a97e9a04ed910bb3f6b5bd
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 15:46:12 2018 +0100
add environment variable check to find casacore
commit 7d7b844c655a7467829b2cb7775dc211b563f4ec
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 15:31:56 2018 +0100
clarify array access in fitsio
commit d291d4402915eb04a49b522cfee1be739056cd09
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 15:12:13 2018 +0100
fixed missing free (pinv)
commit c42e08e4480541abe24025d361f3faeba52311a9
Merge: 088f2d0 40252cd
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 14:40:47 2018 +0100
Merge branch 'sprint_clang' of github.com:nlesc-dirac/sagecal into sprint_clang
commit 088f2d0fd0ba0da157df1ad810aa166c6f9e7ac6
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 14:38:57 2018 +0100
fix (double) allocation instead of (int)
commit 005e68d20ef6663ec17b45594981f17599e03add
Merge: 40252cd aeb97a3
Author: Hanno Spreeuw <HannoSpreeuw@users.noreply.github.com>
Date: Tue Feb 27 12:11:25 2018 +0100
Merge pull request #23 from nlesc-dirac/sprint_cppcheck
Sprint cppcheck
commit aeb97a3900ffe28f95058e60f701ade69a1359e8
Merge: 9207c91 d779d2a
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 11:54:50 2018 +0100
Merge branch 'sprint_cppcheck' of github.com:nlesc-dirac/sagecal into sprint_cppcheck
commit 9207c91d37e99e4a25b28735ea445aa22fab21e7
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 11:54:16 2018 +0100
more fixes
commit 40d9e8a6f171c81a0ba095fe8d083c83ca66a181
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 11:42:00 2018 +0100
remove found messages. they are managed by cmake modules
commit 35fa294fb59f5283a905e6c34159b8691f460350
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 11:35:49 2018 +0100
remove openblas status message
commit d779d2a208dd41237560ec4c6bc14c28e6bbe86b
Merge: 26436e0 05a007d
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Tue Feb 27 11:16:37 2018 +0100
Merge branch 'sprint_cppcheck' of github.com:nlesc-dirac/sagecal into sprint_cppcheck
I am confused, but it seems there is a duplication of the branch
sprint_cppcheck. I do not understand how this came about.
commit 26436e09f39c82836c33a0cc7298ddf4155743c5
Author: Hanno Spreeuw <h.spreeuw@esciencecenter.nl>
Date: Tue Feb 27 11:10:45 2018 +0100
I erroneously branched sprint_cppcheck from master instead of sprint, trying to fix that now by committing this README from the sprint_readme to sprint_cppcheck
commit 53036ff783df1dccaad9a1bf80e1d17f943466b8
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 11:07:12 2018 +0100
remove OpenBLAS option. It will be enabled by default.
commit 3be39951783fd6abc6f73af16f8867c174f6b000
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 11:06:09 2018 +0100
upgrade the cmake version
commit 872450ce3e20f50ff98c0aba6e42d87db25e9f5c
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Tue Feb 27 11:04:04 2018 +0100
add wcslib info
commit 05a007d619c304ee07b24a18cd42f1c009bb5f4d
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 07:13:00 2018 +0100
more cppcheck fixes
commit 790827e10416d7ec94ba9debd651e9450679178f
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 06:57:15 2018 +0100
fix cppcheck warnings
commit 6abb1de3dc9085c9ee1131cafa97bf4d37ad8a97
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 06:48:36 2018 +0100
fix cppcheck warnings
commit bfae096be4c6fdf39bf16ae6af91d7eb33629404
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 06:40:34 2018 +0100
fix memory leak
commit 70aecbf75a143d06d872554b826d4a0c769806d7
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 06:38:47 2018 +0100
more cppcheck fix
commit e891ccd77d0932b5e31d525fe9f8461fd74e0c38
Author: Sarod Yatawatta <sarod@dop373.nfra.nl>
Date: Tue Feb 27 06:27:54 2018 +0100
fix cppcheck warning
commit 9e6efce6fe997f8f02dfd1ad82578810683cb071
Author: Faruk D <f.diblen@esciencecenter.nl>
Date: Mon Feb 26 18:14:58 2018 +0100