-
Notifications
You must be signed in to change notification settings - Fork 5
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Generate ssso-merged-uberon.obo #73
Comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Many ontologies in the repository have been updated. I tried to generate the merged composite ontology myself, using the Makefile and owltools. Everything works fine, except that I miss the core UBERON life stages (e.g., class declaration for UBERON:0004730, etc).
Problems:
http://purl.obolibrary.org/obo/uberon/subsets/life-stages-minimal.obo is not accessible (error
NoSuchKeyThe specified key does not exist.
)And anyway, I guess this life-stages-minimal.obo already contains the xrefs to species-specific life stage ontologies.
ping @cmungall: can you please tell me what am I missing to get the core UBERON classes declared in the merged life stage ontology?
(Note: see this PR for the updates: #72
But also I have a locally modified FBdv version that I would like to merge, so I'd like to do the merge myself)
The text was updated successfully, but these errors were encountered: