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[features] Add Visualization and model explainability modules #3

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okbalefthanded opened this issue Oct 18, 2019 · 3 comments
Open

[features] Add Visualization and model explainability modules #3

okbalefthanded opened this issue Oct 18, 2019 · 3 comments
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enhancement New feature or request

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@okbalefthanded okbalefthanded added the enhancement New feature or request label Oct 18, 2019
@okbalefthanded okbalefthanded self-assigned this Oct 18, 2019
okbalefthanded added a commit that referenced this issue Nov 29, 2019
@okbalefthanded
- issue #5 :
d79a199 
	- auto lint with autopep8
- issue #3 :
	- Added visualization module:
		- Learning curve: train_val
		- ROC curve
		- Confustion Matrix

 On branch dev
 Changes to be committed:
	modified:   aawedha/analysis/preprocess.py
	modified:   aawedha/evaluation/base.py
	modified:   aawedha/evaluation/cross_subject.py
	modified:   aawedha/evaluation/single_subject.py
	modified:   aawedha/io/base.py
	modified:   aawedha/io/bci_comp_iv_2a.py
	modified:   aawedha/io/exoskeleton.py
	modified:   aawedha/io/freiburg_online.py
	modified:   aawedha/io/inria_ern.py
	modified:   aawedha/io/laresi.py
	modified:   aawedha/io/physionet_mi.py
	modified:   aawedha/io/san_diego.py
	modified:   aawedha/io/tsinghua.py
	modified:   aawedha/models/EEGModels.py
	modified:   aawedha/paradigms/base.py
	modified:   aawedha/paradigms/erp.py
	modified:   aawedha/paradigms/hybrid.py
	modified:   aawedha/paradigms/motor_imagery.py
	modified:   aawedha/paradigms/ssvep.py
	modified:   aawedha/paradigms/subject.py
	modified:   aawedha/process/base.py
	modified:   aawedha/scripts/cross_subj.py
	modified:   aawedha/scripts/single_subj.py
	new file:   aawedha/visualization/__init__.py
	new file:   aawedha/visualization/viz.py
okbalefthanded added a commit that referenced this issue Nov 30, 2019
@okbalefthanded
- issue #5 :
6125240 
	- changed n_subject assignment in base evaluation
- issue #3 :
	- Added performance per subject viz as Barplot
 On branch dev
 Changes to be committed:
	modified:   aawedha/evaluation/base.py
	modified:   aawedha/evaluation/single_subject.py
	modified:   aawedha/visualization/viz.py
okbalefthanded added a commit that referenced this issue Dec 1, 2019
@okbalefthanded
- issue #4 :
c60c263 
	- Added events to ERP laresi
- issue #3 :
	- fixed plot roc curve for multiple subject datasets
	modified:   aawedha/io/laresi.py
	modified:   aawedha/visualization/viz.py
okbalefthanded added a commit that referenced this issue Feb 11, 2020
@okbalefthanded
- issue #3 :
5bf4233 
	- fixed plot train_val curve
 On branch dev
 Changes to be committed:
	modified:   aawedha/evaluation/cross_set.py
	modified:   aawedha/visualization/viz.py
okbalefthanded added a commit that referenced this issue Feb 12, 2020
@okbalefthanded
- issue #3 :
3c48696 
	- fixed plot roc curve
 On branch dev
 Changes to be committed:
	modified:   aawedha/visualization/viz.py
okbalefthanded added a commit that referenced this issue Feb 12, 2020
@okbalefthanded
- issue #3 :
46de34b 
	- Woking on explainability visualizations
		- Finished plot_temporal filters
		- working on plot_topomaps
 On branch dev
 Changes to be committed:
	modified:   aawedha/evaluation/base.py
	new file:   aawedha/visualization/explain.py
okbalefthanded added a commit that referenced this issue Feb 13, 2020
@okbalefthanded
- issue #3 :
53dbf4e 
	- finished plot_topomaps, using MNE.
 On branch dev
 Changes to be committed:
	modified:   aawedha/visualization/explain.py
okbalefthanded added a commit that referenced this issue Feb 16, 2020
@okbalefthanded
- issue #3 :
17af668 
	- Added signal analysis visualization
	- renamed viz.py to performance.py
 On branch dev
 Changes to be committed:
	modified:   aawedha/visualization/explain.py
	renamed:    aawedha/visualization/viz.py -> aawedha/visualization/performance.py
	new file:   aawedha/visualization/signal.py
okbalefthanded added a commit that referenced this issue Feb 16, 2020
@okbalefthanded
- issue #3 :
25d6cfa 
	- Added model learned kernels spectral power
 On branch dev
 Changes to be committed:
	modified:   aawedha/evaluation/base.py
	modified:   aawedha/visualization/explain.py
okbalefthanded added a commit that referenced this issue Apr 8, 2020
@okbalefthanded
- issue #3 :
68b7fcc 
	- Added time_frequency transform
	- Added time_frequency plot
 On branch dev
 Changes to be committed:
	new file:   aawedha/analysis/time_frequency.py
	modified:   aawedha/visualization/signal.py
@okbalefthanded
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okbalefthanded commented Sep 1, 2020 •
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Interpretability Frameworks :

  • TensorFlow:
  • PyTorch:

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okbalefthanded commented Apr 26, 2021 •
edited
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  • signed R-square for binary classes sepearbility

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okbalefthanded commented Apr 26, 2021 •
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  • Frequency SNR for SSVEP data

okbalefthanded added a commit that referenced this issue Apr 26, 2021
@okbalefthanded
- issue #3 :
936e9d8 
	- Added plot SNR, plot signed r-square
	- modified plot_grand_average, plot_topomaps
- issue #2 :
	- modified ERP datasets, by adding baseline correction to epoching
 On branch dev
 Changes to be committed:
	modified:   aawedha/analysis/preprocess.py
	new file:   aawedha/analysis/stats.py
	modified:   aawedha/analysis/time_frequency.py
	modified:   aawedha/io/epfl.py
	modified:   aawedha/io/essex.py
	modified:   aawedha/io/laresi.py
	modified:   aawedha/io/openbmi.py
	modified:   aawedha/visualization/explain.py
	modified:   aawedha/visualization/signal.py
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