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tmp-test-xetabase-branch.yml
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name: TMP test-xetabase-branch
run-name: 'Pull request approve workflow ${{ github.event.pull_request.head.ref }} -> ${{ github.event.pull_request.base.ref }} by @${{ github.actor }}'
on:
push:
branches:
- TASK-*
jobs:
calculate-xetabase-branch:
name: Calculate Xetabase branch
runs-on: ubuntu-22.04
outputs:
xetabase_branch: ${{ steps.get_xetabase_branch.outputs.xetabase_branch }}
steps:
- name: Clone java-common-libs
uses: actions/checkout@v4
with:
fetch-depth: '10'
## This is important to avoid the error in the next step: "fatal: repository 'https://github.com/zetta-genomics/opencga-enterprise.git/' not found"
persist-credentials: false
- id: get_xetabase_branch
name: "Get current branch for Xetabase from target branch"
run: |
if [ "$( git ls-remote https://$ZETTA_REPO_ACCESS_TOKEN@github.com/opencb/opencga.git "TASK-6879" )" ] ; then
echo "OPENCGA TASK-6879 branch";
fi
if [ "$( git ls-remote https://$ZETTA_REPO_ACCESS_TOKEN@github.com/zetta-genomics/opencga-enterprise.git "$input_branch" )" ] ; then
echo "Here it is TASK-6807 branch";
fi
chmod +x ./.github/workflows/scripts/get-xetabase-branch.sh
echo "secrets.ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}" | tee -a ${GITHUB_STEP_SUMMARY}
xetabase_branch=$(./.github/workflows/scripts/get-xetabase-branch.sh "TASK-6879" )
echo "__Xetabase ref:__ \"${xetabase_branch}\"" | tee -a ${GITHUB_STEP_SUMMARY}
echo "xetabase_branch=${xetabase_branch}" >> $GITHUB_OUTPUT
env:
ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}
test:
name: "Run all tests before merging"
needs: calculate-xetabase-branch
uses: opencb/java-common-libs/.github/workflows/test-xetabase-workflow.yml@develop
with:
branch: ${{ needs.calculate-xetabase-branch.outputs.xetabase_branch }}
task: TASK-6879
secrets: inherit