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# This is a combination of 10 commits.
# This is the 1st commit message: Add deployment tests # This is the commit message #2: Update # This is the commit message #3: Fix # This is the commit message #4: Trim down differences between environments # This is the commit message #5: Try to isolate crash # This is the commit message #6: Rename environment # This is the commit message #7: Further pare down environments # This is the commit message #8: Bump Python version # This is the commit message #9: Update environments # This is the commit message #10: Double check OpenEye license
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name: Deployment tests | ||
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on: | ||
push: | ||
branches: | ||
- "main" | ||
pull_request: | ||
branches: | ||
- "main" | ||
release: | ||
types: | ||
- released | ||
- prereleased | ||
schedule: | ||
- cron: "0 0 * * *" | ||
workflow_dispatch: | ||
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||
defaults: | ||
run: | ||
shell: bash -l {0} | ||
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jobs: | ||
test: | ||
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name: ${{ matrix.os }}, 🐍=${{ matrix.python-version }}, 👁️=${{ matrix.openeye }} | ||
runs-on: ${{ matrix.os }} | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
os: [ubuntu-latest, macos-latest] | ||
python-version: ["3.9"] | ||
openeye: ["true", "false"] | ||
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env: | ||
OE_LICENSE: ${{ github.workspace }}/oe_license.txt | ||
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steps: | ||
- uses: actions/checkout@v3 | ||
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- name: Install latest release from conda with OpenEye Toolkits | ||
if: ${{ matrix.openeye == 'true' }} | ||
uses: mamba-org/provision-with-micromamba@main | ||
with: | ||
environment-file: devtools/conda-envs/deployment_openeye.yaml | ||
extra-specs: | | ||
python=${{ matrix.python-version }} | ||
- name: Install latest release from conda without OpenEye Toolkits | ||
if: ${{ matrix.openeye == 'false' }} | ||
uses: mamba-org/provision-with-micromamba@main | ||
with: | ||
environment-file: devtools/conda-envs/deployment.yaml | ||
extra-specs: | | ||
python=${{ matrix.python-version }} | ||
- name: License OpenEye Toolkits | ||
if: ${{ matrix.openeye == true }} | ||
env: | ||
OE_LICENSE_TEXT: ${{ secrets.OE_LICENSE }} | ||
run: | | ||
echo "${OE_LICENSE_TEXT}" > ${OE_LICENSE} | ||
python -c "from openeye import oechem; assert oechem.OEChemIsLicensed()" | ||
- name: Verify that the latest version was installed | ||
run: | | ||
cd /tmp/ | ||
export LATEST_TAG=$(git ls-remote --tags https://github.com/openforcefield/openff-bespokefit.git | cut -f2 | grep -E "([0-9]+)\.([0-9]+)\.([0-9]+)$" | sort --version-sort | tail -1 | sed 's/refs\/tags\///') | ||
export FOUND_VER=$(python -c "import openff.bespokefit; print(openff.bespokefit.__version__)") | ||
if [[ $LATEST_TAG != $FOUND_VER ]]; then | ||
echo "Latest tag is" | ||
echo $LATEST_TAG | ||
echo "Found version is" | ||
echo $FOUND_VER | ||
echo "Version mismatch" | ||
exit 1 | ||
fi | ||
cd - | ||
- name: Run tests | ||
run: | | ||
python -c "from openeye import oechem; assert oechem.OEChemIsLicensed()" | ||
python -m pytest -v openff/bespokefit/tests/executor/services/coordinator/test_app.py::test_get_molecule_image | ||
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name: latest-deployment | ||
channels: | ||
- conda-forge | ||
dependencies: | ||
- openff-bespokefit | ||
- ambertools | ||
- pytest | ||
- pytest-cov | ||
- pytest-asyncio | ||
- pytest-celery | ||
- requests-mock |
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Original file line number | Diff line number | Diff line change |
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name: latest-deployment-openeye | ||
channels: | ||
- conda-forge | ||
- openeye | ||
dependencies: | ||
- openff-bespokefit | ||
- openeye-toolkits | ||
- pytest | ||
- pytest-cov | ||
- pytest-asyncio | ||
- pytest-celery | ||
- requests-mock |