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project.yaml
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project.yaml
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version: '3.0'
# Ignore this`expectation` block. It is required but not used, and will be removed in future versions.
expectations:
population_size: 1000
actions:
generate_pf_measures:
run: >
ehrql:v1 generate-measures analysis/measures_definition_pf_codes_conditions.py
--output output/measures/pf_codes_conditions_measures.csv
outputs:
moderately_sensitive:
measure: output/measures/pf_codes_conditions_measures.csv
generate_pf_report:
run: >
r:latest -e 'rmarkdown::render("reports/pharmacy_first_report.Rmd", output_dir = "/workspace/output/reports", knit_root_dir = "/workspace")'
needs: [generate_pf_measures]
outputs:
moderately_sensitive:
report: output/reports/pharmacy_first_report.html