artifact.yml

name: Build and Push to Artifact Registry

"on":
  push:
    branches:
      - "*"
    tags:
      - "v[0-9]+.[0-9]+.[0-9]+-*"

env:
  PROJECT_ID: open-targets-genetics-dev
  REGION: europe-west1
  GAR_LOCATION: europe-west1-docker.pkg.dev/open-targets-genetics-dev
  REPOSITORY: gentropy-app
  PYTHON_VERSION_DEFAULT: "3.10.8"

jobs:
  build-push-artifact:
    runs-on: ubuntu-latest
    steps:
      - name: "Checkout"
        uses: "actions/checkout@v3"

      - name: "auth"
        uses: "google-github-actions/auth@v2"
        with:
          credentials_json: "${{ secrets.SERVICE_ACCOUNT_KEY }}"

      - name: "Set up Cloud SDK"
        uses: "google-github-actions/setup-gcloud@v2"

      - name: "Use gcloud CLI"
        run: "gcloud info"

      - name: Set up QEMU
        uses: docker/setup-qemu-action@v3

      - name: Set up Docker Buildx
        uses: docker/setup-buildx-action@v3

      - name: "Docker auth"
        run: |
          gcloud auth configure-docker ${{ env.REGION }}-docker.pkg.dev --quiet

      - name: Quick Docker build (gentropy only, AMD64 only, with layer cache)
        uses: docker/build-push-action@v6
        with:
          platforms: linux/amd64
          push: true
          tags: "${{ env.GAR_LOCATION }}/${{ env.REPOSITORY }}/gentropy:${{ github.ref_name }}"
          context: .
          cache-from: type=gha
          cache-to: type=gha,mode=max

      # skip the `v` at the beginning of the tag for docker image tags
      - name: Create a docker tag
        id: docker-tag
        shell: bash
        env:
          TAG: ${{ github.ref_name }}
        run: |
          TAG=$(echo $TAG | sed 's/^v//')
          echo "TAG=$TAG" >> $GITHUB_ENV
          echo "The tag for this build is $TAG"

      - name: Build and push gentropy image
        if: steps.docker-tag.outcome == 'success'
        uses: docker/build-push-action@v6
        with:
          platforms: linux/amd64,linux/arm64
          push: true
          tags: "${{ env.GAR_LOCATION }}/${{ env.REPOSITORY }}/gentropy:${{ env.TAG }}"
          context: .

      - name: Build and push VEP image
        if: steps.docker-tag.outcome == 'success'
        uses: docker/build-push-action@v6
        with:
          platforms: linux/amd64
          push: true
          tags: "${{ env.GAR_LOCATION }}/${{ env.REPOSITORY }}/custom_ensembl_vep:${{ env.TAG }}"
          context: .
          file: "src/vep/Dockerfile"

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: ${{ env.PYTHON_VERSION_DEFAULT }}
      - name: Install and configure Poetry
        uses: snok/install-poetry@v1
        with:
          virtualenvs-create: true
          virtualenvs-in-project: true
          installer-parallel: true

      - name: Build and push spark cluster dependencies
        run: |
          make build