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    32 repositories

    • Tau_Transport

      Public
      Code and data files required to generate all results for the axonal transport regulation project
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Nov 15, 2024Nov 15, 2024

    • SuStaIn

      Public
      SuStaIn event based model, data preprocessing and analysis
      Jupyter Notebook
      •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • RajLab-Bibliography

      Public
      Bibliography files for RajLab papers
      TeX
      •0•2•0•0•Updated Nov 13, 2024Nov 13, 2024

    • CellTypeVulnerability

      Public
      Mouse tauopathy cell-type regional vulnerability project
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • journalclub

      Public
      Journal Club
      journalsarticlesschedulelab
      GNU General Public License v3.0
      •7•3•0•0•Updated Sep 9, 2024Sep 9, 2024

    • IntDegSeg

      Public
      A repository for the article Integrative, Segregative, and Degenerate Harmonics of the Structural Connectome
      MATLAB
      •
      MIT License
      •0•4•0•0•Updated Jul 29, 2024Jul 29, 2024

    • Nexis

      Public
      Code for running the extended Network Diffusion Model (eNDM)
      MATLAB
      •
      MIT License
      •0•1•0•0•Updated Jul 2, 2024Jul 2, 2024

    • Nexis-Human

      Public
      Nexis set up to fit to individual human data (gene or global)
      Jupyter Notebook
      •0•0•0•0•Updated Jun 12, 2024Jun 12, 2024

    • Joint-structure-function-modeling-in-AD

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 9, 2024Apr 9, 2024

    • SBI-SGM-clean

      Public
      Jupyter Notebook
      •3•0•0•0•Updated Mar 16, 2024Mar 16, 2024

    • NexIS_SBI

      Public
      Code for NexIS:SBI (Eventually to merge into main repo.)
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Mar 15, 2024Mar 15, 2024

    • SC-from-FC

      Public
      MATLAB
      •0•0•0•0•Updated Feb 7, 2024Feb 7, 2024

    • Brainframe

      Public
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Sep 19, 2023Sep 19, 2023

    • MISS-Pipeline

      Public
      Method for mapping cell types across brain using ISH atlases
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Sep 19, 2023Sep 19, 2023

    • CellTypeConnectivity

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 9, 2023Aug 9, 2023

    • cns2023

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 18, 2023Jul 18, 2023

    • TauDirectionality

      Public
      Network-based model of tau propagation with directionality in the mouse brain
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

    • tau-PET-prediction

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Jan 28, 2023Jan 28, 2023

    • Brainframe_old

      Public
      Matlab functionality for creating 3D human & mouse brain renderings, with many options.
      MATLAB
      •
      MIT License
      •0•2•0•0•Updated Sep 17, 2022Sep 17, 2022

    • cns2022

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 18, 2022Jul 18, 2022

    • cortography

      Public
      Utilities for brain atlas related tasks
      brainatlas
      Jupyter Notebook
      •
      The Unlicense
      •3•2•6•0•Updated Dec 21, 2021Dec 21, 2021

    • spectrome-stability

      Public
      Jupyter Notebook
      •
      MIT License
      •3•0•0•0•Updated Nov 10, 2021Nov 10, 2021

    • spectrome-revisited

      Public
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Nov 10, 2021Nov 10, 2021

    • cns2021

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 30, 2021Jun 30, 2021

    • spectrome

      Public
      Spectral graph model base code and examples
      neuroscienceconnectivityspectrumbrainconnectome
      Jupyter Notebook
      •
      MIT License
      •5•7•7•2•Updated May 19, 2021May 19, 2021

    • Human_Brain_Atlases

      Public
      Commonly used human brain atlases as a Datalad dataset
      1•0•0•0•Updated Apr 27, 2021Apr 27, 2021

    • Human_Brain_Atlases-glasser

      Public
      1•2•0•0•Updated Mar 17, 2021Mar 17, 2021

    • Human_Brain_Atlases-aal

      Public
      0•0•0•0•Updated Mar 15, 2021Mar 15, 2021

    • Human_Brain_Atlases-desikan-killiany

      Public
      1•0•0•0•Updated Mar 15, 2021Mar 15, 2021

    • Human_Brain_Atlases-brainnectome

      Public
      1•0•0•0•Updated Mar 15, 2021Mar 15, 2021